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PDB: 129 results

1AK7
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DESTRIN, NMR, 20 STRUCTURES
Descriptor: DESTRIN
Authors:Hatanaka, H, Moriyama, K, Ogura, K, Ichikawa, S, Yahara, I, Inagaki, F.
Deposit date:1997-05-29
Release date:1997-10-15
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Tertiary structure of destrin and structural similarity between two actin-regulating protein families.
Cell(Cambridge,Mass.), 85, 1996
1BON
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THREE-DIMENSIONAL STRUCTURE OF BOMBYXIN-II, AN INSULIN-RELATED BRAIN-SECRETORY PEPTIDE OF THE SILKMOTH BOMBYX MORI: COMPARISON WITH INSULIN AND RELAXIN
Descriptor: BOMBYXIN-II,BOMBYXIN A-2, BOMBYXIN-II,BOMBYXIN A-6
Authors:Nagata, K, Hatanaka, H, Kohda, D, Inagaki, F, Structural Proteomics in Europe (SPINE)
Deposit date:1994-07-21
Release date:1995-01-26
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of bombyxin-II an insulin-like peptide of the silkmoth Bombyx mori: structural comparison with insulin and relaxin.
J.Mol.Biol., 253, 1995
1BOM
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THREE-DIMENSIONAL STRUCTURE OF BOMBYXIN-II, AN INSULIN-RELATED BRAIN-SECRETORY PEPTIDE OF THE SILKMOTH BOMBYX MORI: COMPARISON WITH INSULIN AND RELAXIN
Descriptor: BOMBYXIN-II,BOMBYXIN A-2, BOMBYXIN-II,BOMBYXIN A-6
Authors:Nagata, K, Hatanaka, H, Kohda, D, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-11-01
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of bombyxin-II an insulin-like peptide of the silkmoth Bombyx mori: structural comparison with insulin and relaxin.
J.Mol.Biol., 253, 1995
1HSQ
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SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
Descriptor: PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
Authors:Kohda, D, Hatanaka, H, Odaka, M, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of phospholipase C-gamma.
Cell(Cambridge,Mass.), 72, 1993
2JNV
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Solution structure of C-terminal domain of NifU-like protein from Oryza sativa
Descriptor: NifU-like protein 1, chloroplast
Authors:Saio, T, Ogura, K, Kumeta, H, Yokochi, M, Katoh, S, Katoh, E, Inagaki, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-06
Release date:2007-12-18
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The cooperative role of OsCnfU-1A domain I and domain II in the iron sulphur cluster transfer process as revealed by NMR
J.Biochem.(Tokyo), 142, 2007
2EYY
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CT10-Regulated Kinase isoform I
Descriptor: v-crk sarcoma virus CT10 oncogene homolog isoform a
Authors:Kobashigawa, Y, Tanaka, S, Inagaki, F.
Deposit date:2005-11-10
Release date:2006-11-10
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2ZPN
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The crystal structure of Saccharomyces cerevisiae Atg8- Atg19(412-415) complex
Descriptor: Autophagy-related protein 8, SULFATE ION, Saccharomyces cerevisiae Atg19(412-415)
Authors:Noda, N.N, Inagaki, F.
Deposit date:2008-07-17
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of target recognition by Atg8/LC3 during selective autophagy
Genes Cells, 13, 2008
3A7O
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The crystal structure of the coiled-coil domain of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
1IP9
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SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P
Descriptor: BEM1 PROTEIN
Authors:Terasawa, H, Noda, Y, Ito, T, Hatanaka, H, Ichikawa, S, Ogura, K, Sumimoto, H, Inagaki, F.
Deposit date:2001-04-26
Release date:2001-08-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and ligand recognition of the PB1 domain: a novel protein module binding to the PC motif.
EMBO J., 20, 2001
1J2F
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X-ray crystal structure of IRF-3 and its functional implications
Descriptor: Interferon regulatory factor 3
Authors:Takahasi, K, Noda, N, Horiuchi, M, Mori, M, Okabe, Y, Fukuhara, Y, Terasawa, H, Fujita, T, Inagaki, F.
Deposit date:2003-01-04
Release date:2003-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of IRF-3 and its functional implications.
Nat.Struct.Biol., 10, 2003
1K1Z
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Solution structure of N-terminal SH3 domain mutant(P33G) of murine Vav
Descriptor: vav
Authors:Ogura, K, Nagata, K, Horiuchi, M, Ebisui, E, Hasuda, T, Yuzawa, S, Nishida, M, Hatanaka, H, Inagaki, F.
Deposit date:2001-09-26
Release date:2001-10-10
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structure of N-terminal SH3 domain of Vav and the recognition site for Grb2 C-terminal SH3 domain
J.BIOMOL.NMR, 22, 2002
3A77
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The crystal structure of phosphorylated IRF-3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Interferon regulatory factor 3
Authors:Takahasi, K, Horiuchi, M, Noda, N.N, Inagaki, F.
Deposit date:2009-09-17
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ser386 phosphorylation of transcription factor IRF-3 induces dimerization and association with CBP/p300 without overall conformational change.
Genes Cells, 15, 2010
1HRE
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SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4
Descriptor: HEREGULIN ALPHA
Authors:Nagata, K, Kohda, D, Hatanaka, H, Ichikawa, S, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4.
EMBO J., 13, 1994
1HRF
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SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4
Descriptor: HEREGULIN ALPHA
Authors:Nagata, K, Kohda, D, Hatanaka, H, Ichikawa, S, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4.
EMBO J., 13, 1994
1IPG
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SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P
Descriptor: BEM1 PROTEIN
Authors:Terasawa, H, Noda, Y, Ito, T, Hatanaka, H, Ichikawa, S, Ogura, K, Sumimoto, H, Inagaki, F.
Deposit date:2001-05-14
Release date:2001-08-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and ligand recognition of the PB1 domain: a novel protein module binding to the PC motif.
EMBO J., 20, 2001
1WLZ
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Crystal structure of DJBP fragment which was obtained by limited proteolysis
Descriptor: CAP-binding protein complex interacting protein 1 isoform a
Authors:Honbou, K, Suzuki, N, Horiuchi, M, Taira, T, Niki, T, Ariga, H, Inagaki, F.
Deposit date:2004-07-01
Release date:2005-08-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of DJBP Fragment which was obtained by Limited Proteolysis
To be Published
2YZ0
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Solution Structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
Descriptor: Serine/threonine-protein kinase GCN2
Authors:Ogura, K, Torikai, S, Kumeta, H, Inagaki, F.
Deposit date:2007-05-02
Release date:2008-05-06
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
to be published
1MKN
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N-TERMINAL HALF OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
2Z0D
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The crystal structure of human Atg4B- LC3(1-120) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
2Z0E
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The crystal structure of human Atg4B- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
1MKC
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C-TERMINAL DOMAIN OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
3A7P
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The crystal structure of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
1GCQ
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CRYSTAL STRUCTURE OF VAV AND GRB2 SH3 DOMAINS
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, VAV PROTO-ONCOGENE
Authors:Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F.
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Novel recognition mode between Vav and Grb2 SH3 domains.
EMBO J., 20, 2001
2ZZP
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The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2009-02-22
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
1Q1O
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Solution Structure of the PB1 Domain of Cdc24p (Long Form)
Descriptor: Cell division control protein 24
Authors:Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F.
Deposit date:2003-07-22
Release date:2003-10-14
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The PB1 domain and the PC motif-containing region are structurally similar protein binding modules
EMBO J., 22, 2003

219515

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