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PDB: 17801 results

3MJ8
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BU of 3mj8 by Molmil
Crystal structure of HL4E10 Fab, a hamster Ab stimulatory for gammadelta T cells
Descriptor: STIMULATORY HAMSTER ANTIBODY HL4E10 FAB HEAVY CHAIN, STIMULATORY HAMSTER ANTIBODY HL4E10 FAB LIGHT CHAIN
Authors:Verdino, P, Wilson, I.A.
Deposit date:2010-04-12
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:cDNA sequence and Fab crystal structure of HL4E10, a hamster IgG lambda light chain antibody stimulatory for gammadelta T cells.
Plos One, 6, 2011
2OOM
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BU of 2oom by Molmil
NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA/RNA aptamer
Descriptor: RNA 16-mer, TAR RNA element of HIV-1
Authors:Lebars, I, Richard, T, Di Primo, C, Toulme, J.J.
Deposit date:2007-01-26
Release date:2008-01-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA-modified aptamer
Nucleic Acids Res., 35, 2007
2OPV
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BU of 2opv by Molmil
Solution NMR Structure of the Second Domain of KSRP
Descriptor: KHSRP protein
Authors:Diaz-Moreno, I, Ramos, A, Garcia-Mayoral, M.F, Hollingworth, D.
Deposit date:2007-01-30
Release date:2008-02-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The NMR Structures of the N-terminal Domains of KSRP
To be Published
5NFG
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BU of 5nfg by Molmil
Structure of recombinant cardosin B from Cynara cardunculus
Descriptor: Procardosin-B,Procardosin-B, alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Pereira, P.J.B, Figueiredo, A.C, Manso, J.A, Almeida, C.M, Simoes, I.
Deposit date:2017-03-14
Release date:2017-10-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.375 Å)
Cite:Functional and structural characterization of synthetic cardosin B-derived rennet.
Appl. Microbiol. Biotechnol., 101, 2017
5NHL
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BU of 5nhl by Molmil
Human Erk2 with an Erk1/2 inhibitor
Descriptor: (6~{R})-5-(2-methoxyethyl)-6-methyl-2-[5-methyl-2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
5NHX
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BU of 5nhx by Molmil
Periplasmic domain of Outer Membrane Protein A from Klebsiella pneumoniae
Descriptor: CITRIC ACID, Outer membrane protein A
Authors:Demange, P, Tranier, S, Nars, G, Iordanov, I, Mourey, L, Saurel, O, Milon, A.
Deposit date:2017-03-22
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and dynamics of the C-terminal domain of OmpA from Klebsiella pneumonia
To Be Published
2W4J
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BU of 2w4j by Molmil
X-ray structure of a DAP-Kinase 2-277
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, DEATH-ASSOCIATED PROTEIN KINASE 1, ...
Authors:De Diego, I, Kuper, J, Lehmann, F, Wilmanns, M.
Deposit date:2008-11-27
Release date:2009-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-Ray Structure of a Dap-Kinase Calmodulin Complex
To be Published
2ORL
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BU of 2orl by Molmil
Solution structure of the cytochrome c- para-aminophenol adduct
Descriptor: 4-AMINOPHENOL, Cytochrome c iso-1, HEME C
Authors:Assfalg, M, Bertini, I, Del Conte, R, Giachetti, A, Turano, P.
Deposit date:2007-02-03
Release date:2007-04-24
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Cytochrome c and organic molecules: solution structure of the p-aminophenol adduct.
Biochemistry, 46, 2007
3UDJ
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BU of 3udj by Molmil
Crystal Structure of BACE with Compound 5
Descriptor: 1,2-ETHANEDIOL, Beta-secretase 1, DI(HYDROXYETHYL)ETHER, ...
Authors:Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
Deposit date:2011-10-28
Release date:2012-04-18
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
3UDR
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BU of 3udr by Molmil
Crystal Structure of BACE with Compound 14
Descriptor: 1,2-ETHANEDIOL, 1-cyanocyclohexyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylate, Beta-secretase 1, ...
Authors:Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
Deposit date:2011-10-28
Release date:2012-04-18
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
2ONU
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BU of 2onu by Molmil
Plasmodium falciparum ubiquitin conjugating enzyme PF10_0330, putative homologue of human UBE2H
Descriptor: TETRAETHYLENE GLYCOL, Ubiquitin-conjugating enzyme, putative
Authors:Dong, A, Lew, J, Lin, L, Hassanali, A, Zhao, Y, Senisterra, G, Wasney, G, Vedadi, M, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Hui, R, Brokx, S.J, Structural Genomics Consortium (SGC)
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Plasmodium falciparum ubiquitin conjugating enzyme PF10_0330, putative homologue of human UBE2H
To be Published
2OP2
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BU of 2op2 by Molmil
Crystal structure of RNase double-mutant V43C R85C with extra disulphide bond
Descriptor: Ribonuclease pancreatic
Authors:Kurinov, I.
Deposit date:2007-01-26
Release date:2007-10-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Implementation of a k/k(0) Method to Identify Long-Range Structure in Transition States during Conformational Folding/Unfolding of Proteins.
Structure, 15, 2007
2OWA
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BU of 2owa by Molmil
Crystal structure of putative GTPase activating protein for ADP ribosylation factor from Cryptosporidium parvum (cgd5_1040)
Descriptor: Arfgap-like finger domain containing protein, ZINC ION
Authors:Dong, A, Lew, J, Zhao, Y, Hassanali, A, Lin, L, Ravichandran, M, Wasney, G, Vedadi, M, Kozieradzki, I, Bochkarev, A, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Hui, R, Qiu, W, Structural Genomics Consortium (SGC)
Deposit date:2007-02-15
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of putative GTPase activating protein for ADP ribosylation factor from Cryptosporidium parvum (cgd5_1040)
To be Published
1CI9
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BU of 1ci9 by Molmil
DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI
Descriptor: DIISOPROPYL PHOSPHONATE, PROTEIN (CARBOXYLESTERASE)
Authors:Wagner, U.G, Petersen, E.I, Schwab, H, Kratky, C.
Deposit date:1999-04-08
Release date:2001-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:EstB from Burkholderia gladioli: a novel esterase with a beta-lactamase fold reveals steric factors to discriminate between esterolytic and beta-lactam cleaving activity
Protein Sci., 11, 2002
5NA7
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BU of 5na7 by Molmil
Structure of DPP III from Bacteroides thetaiotaomicron
Descriptor: CHLORIDE ION, Putative dipeptidyl-peptidase III, SULFATE ION, ...
Authors:Sabljic, I, Luic, M.
Deposit date:2017-02-27
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of dipeptidyl peptidase III from the human gut symbiont Bacteroides thetaiotaomicron.
PLoS ONE, 12, 2017
5NHI
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BU of 5nhi by Molmil
Crystal structure of the Escherichia coli N-terminal domain of DsbD (nDsbD) without the cap-loop region
Descriptor: Thiol:disulfide interchange protein DsbD
Authors:Saridakis, E, Stelzl, L.S, Mavridou, D.A.I, Redfield, C.
Deposit date:2017-03-21
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the Escherichia coli N-terminal domain of DsbD (nDsbD) without the cap-loop region
To Be Published
2WBL
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BU of 2wbl by Molmil
Three-dimensional structure of a binary ROP-PRONE complex
Descriptor: RAC-LIKE GTP-BINDING PROTEIN ARAC2, RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FACTOR 8
Authors:Thomas, C, Fricke, I, Weyand, M, Berken, A.
Deposit date:2009-03-02
Release date:2009-04-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:3D Structure of a Binary Rop-Prone Complex: The Final Intermediate for a Complete Set of Molecular Snapshots of the Ropgef Reaction.
Biol.Chem., 390, 2009
2N9H
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BU of 2n9h by Molmil
Glucose as a nuclease mimic in DNA
Descriptor: DNA (5'-D(*CP*TP*AP*GP*CP*(GL6)P*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*TP*GP*CP*TP*AP*G)-3')
Authors:Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Muro, A, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M.
Deposit date:2015-11-25
Release date:2016-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA.
Angew.Chem.Int.Ed.Engl., 55, 2016
1FRD
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BU of 1frd by Molmil
MOLECULAR STRUCTURE OF THE OXIDIZED, RECOMBINANT, HETEROCYST (2FE-2S) FERREDOXIN FROM ANABAENA 7120 DETERMINED TO 1.7 ANGSTROMS RESOLUTION
Descriptor: FE2/S2 (INORGANIC) CLUSTER, HETEROCYST [2FE-2S] FERREDOXIN
Authors:Jacobson, B.L, Chae, Y.K, Markley, J.L, Rayment, I, Holden, H.M.
Deposit date:1993-04-14
Release date:1994-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular structure of the oxidized, recombinant, heterocyst [2Fe-2S] ferredoxin from Anabaena 7120 determined to 1.7-A resolution.
Biochemistry, 32, 1993
5NHF
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BU of 5nhf by Molmil
Human Erk2 with an Erk1/2 inhibitor
Descriptor: 2-[2-(oxan-4-ylamino)pyrimidin-4-yl]-5-(phenylmethyl)-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
5NHJ
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BU of 5nhj by Molmil
Human Erk2 with an Erk1/2 inhibitor
Descriptor: 5-(2-methoxyethyl)-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
5NHP
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BU of 5nhp by Molmil
Human Erk2 with an Erk1/2 inhibitor
Descriptor: 5-(2-methoxyethyl)-1-methyl-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydropyrrolo[3,2-c]pyridin-4-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Debreczeni, J.E, Ward, R.A, Bethel, P, Cook, C, Davies, E, Eckersley, K, Fairley, G, Feron, L, Flemington, V, Graham, M.A, Greenwood, R, Hopcroft, P, Howard, T.D, Hudson, J, James, M, Jones, C.D, Jones, C.R, Lamont, S, Lewis, R, Lindsay, N, Roberts, K, Simpson, I, StGallay, S, Swallow, S, Tonge, M.
Deposit date:2017-03-22
Release date:2017-04-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.
J. Med. Chem., 60, 2017
1FAD
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BU of 1fad by Molmil
DEATH DOMAIN OF FAS-ASSOCIATED DEATH DOMAIN PROTEIN, RESIDUES 89-183
Descriptor: PROTEIN (FADD PROTEIN)
Authors:Jeong, E.-J, Bang, S, Lee, T.H, Park, Y.-I, Sim, W.-S, Kim, K.-S.
Deposit date:1999-03-23
Release date:1999-07-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of FADD death domain. Structural basis of death domain interactions of Fas and FADD.
J.Biol.Chem., 274, 1999
3UMH
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BU of 3umh by Molmil
X-ray structure of the E2 domain of the human amyloid precursor protein (APP) in complex with cadmium
Descriptor: ACETATE ION, Amyloid beta A4 protein, CADMIUM ION
Authors:Dahms, S.O, Konnig, I, Roeser, D, Guhrs, K.H, Than, M.E.
Deposit date:2011-11-13
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metal Binding Dictates Conformation and Function of the Amyloid Precursor Protein (APP) E2 Domain.
J.Mol.Biol., 416, 2012
5AJR
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BU of 5ajr by Molmil
Sterol 14-alpha demethylase (CYP51) from Trypanosoma cruzi in complex with the 1-tetrazole derivative VT-1161 ((R)-2-(2,4-Difluorophenyl)-1, 1-difluoro-3-(1H-tetrazol-1-yl)-1-(5-(4-(2,2,2-trifluoroethoxy)phenyl) pyridin-2-yl)propan-2-ol)
Descriptor: (R)-2-(2,4-Difluorophenyl)-1,1-difluoro-3-(1H-tetrazol-1-yl)-1-(5-(4-(2,2,2-trifluoroethoxy)phenyl)pyridin-2-yl)propan-2-ol, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
Authors:Wawrzak, Z, Hoekstra, W, I Lepesheva, G.
Deposit date:2015-02-26
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Clinical Candidate Vt-1161'S Antiparasitic Effect in Vitro, Activity in a Murine Model of Chagas Disease, and Structural Characterization in Complex with the Target Enzyme Cyp51 from Trypanosoma Cruzi.
Antimicrob.Agents Chemother., 60, 2015

223532

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