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PDB: 17801 results

2VCF
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BU of 2vcf by Molmil
Structure of isoniazid (INH) bound to cytosolic soybean ascorbate peroxidase
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ASCORBATE PEROXIDASE FROM SOYBEAN CYTOSOL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-09-21
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
4BWY
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BU of 4bwy by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI8 (R32)
Descriptor: P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-07-05
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
3P06
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BU of 3p06 by Molmil
Crystal structure of Tellina virus 1 VP4 protease in the form of an intra-molecular(cis)acyl-enzyme complex.
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
Authors:Chung, I.Y.W, Paetzel, M.
Deposit date:2010-09-27
Release date:2011-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Viral Protease Intramolecular Acyl-enzyme Complex: INSIGHTS INTO cis-CLEAVAGE AT THE VP4/VP3 JUNCTION OF TELLINA BIRNAVIRUS.
J.Biol.Chem., 286, 2011
2XZA
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BU of 2xza by Molmil
Crystal Structure of recombinant A.17 antibody FAB fragment
Descriptor: FAB A.17 HEAVY CHAIN, FAB A.17 LIGHT CHAIN
Authors:Carletti, E, Nachon, F, Nicolet, Y, Masson, P, Kurkova, I, Smirnov, I, Friboulet, A, Tramontano, A, Gabibov, A.
Deposit date:2010-11-24
Release date:2011-09-21
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Reactibodies Generated by Kinetic Selection Couple Chemical Reactivity with Favorable Protein Dynamics.
Proc.Natl.Acad.Sci.USA, 108, 2011
2XZC
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BU of 2xzc by Molmil
Crystal Structure of phosphonate-modified recombinant A.17 antibody FAB fragment
Descriptor: 8-METHYL-8-AZABICYCLO[3.2.1]OCTAN-3-YL PHENYLPHOSPHONATE, CHLORIDE ION, FAB A.17 HEAVY CHAIN, ...
Authors:Carletti, E, Nachon, F, Nicolet, Y, Masson, P, Kurkova, I, Smirnov, I, Friboulet, A, Tramontano, A, Gabibov, A.
Deposit date:2010-11-24
Release date:2011-09-21
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Reactibodies Generated by Kinetic Selection Couple Chemical Reactivity with Favorable Protein Dynamics.
Proc.Natl.Acad.Sci.USA, 108, 2011
1EV9
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BU of 1ev9 by Molmil
RAT GLUTATHIONE S-TRANSFERASE A1-1 MUTANT W21F WITH GSO3 BOUND
Descriptor: GLUTATHIONE S-TRANSFERASE A1-1, GLUTATHIONE SULFONIC ACID, SULFATE ION
Authors:Adman, E.T, Le Trong, I, Stenkamp, R.E, Nieslanik, B.S, Dietze, E.C, Tai, G, Ibarra, C, Atkins, W.M.
Deposit date:2000-04-19
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Localization of the C-terminus of rat glutathione S-transferase A1-1: crystal structure of mutants W21F and W21F/F220Y.
Proteins, 42, 2001
6U7V
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BU of 6u7v by Molmil
xRRM structure of spPof8
Descriptor: NITRATE ION, Protein pof8
Authors:Kim, J.-K, Hu, X, Yu, C, Jun, H.-I, Liu, J, Sankaran, B, Huang, L, Qiao, F.
Deposit date:2019-09-03
Release date:2020-09-09
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Quality-Control Mechanism for Telomerase RNA Folding in the Cell.
Cell Rep, 33, 2020
5E30
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BU of 5e30 by Molmil
Crystal structure of H5 hemagglutinin Q226L mutant from the influenza virus A/duck/Egypt/10185SS/2010 (H5N1) with LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2015-10-01
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for a Switch in Receptor Binding Specificity of Two H5N1 Hemagglutinin Mutants.
Cell Rep, 13, 2015
4ZIP
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BU of 4zip by Molmil
HIV-1 wild Type protease with GRL-0648A (a isophthalamide-derived P2-Ligand)
Descriptor: CHLORIDE ION, GLYCEROL, N-[(2,5-dimethyl-1,3-oxazol-4-yl)methyl]-N'-[(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]-N,5-dimethylbenzene-1,3-dicarboxamide, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2015-04-28
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structure-based design, synthesis, X-ray studies, and biological evaluation of novel HIV-1 protease inhibitors containing isophthalamide-derived P2-ligands.
Bioorg.Med.Chem.Lett., 25, 2015
6ZTS
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BU of 6zts by Molmil
Assembly intermediates of orthoreovirus captured in the cell
Descriptor: Lambda-1
Authors:Sutton, G.C, Stuart, D.I.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY
Cite:Assembly intermediates of orthoreovirus captured in the cell.
Nat Commun, 11, 2020
6R3T
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BU of 6r3t by Molmil
Structure of P110 from Mycoplasma Genitalium at 2.7A
Descriptor: Mgp-operon protein 3, PHOSPHATE ION, POTASSIUM ION
Authors:Aparicio, D, Fita, I.
Deposit date:2019-03-21
Release date:2019-04-10
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Mycoplasma genitalium adhesin P110 binds sialic-acid human receptors.
Nat Commun, 9, 2018
3M07
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BU of 3m07 by Molmil
1.4 Angstrom Resolution Crystal Structure of Putative alpha Amylase from Salmonella typhimurium.
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-03-02
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:1.4 Angstrom Resolution Crystal Structure of Putative alpha Amylase from Salmonella typhimurium.
TO BE PUBLISHED
4ZLS
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BU of 4zls by Molmil
HIV-1 wild Type protease with GRL-096-13A (a Boc-derivative P2-Ligand, 3,-5-dimethylbiphenyl P1-Ligand)
Descriptor: ACETATE ION, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2015-05-01
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure-Based Design of Potent HIV-1 Protease Inhibitors with Modified P1-Biphenyl Ligands: Synthesis, Biological Evaluation, and Enzyme-Inhibitor X-ray Structural Studies.
J.Med.Chem., 58, 2015
5DJK
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BU of 5djk by Molmil
Structure of M. tuberculosis CysQ, a PAP phosphatase with PO4 and 2Ca bound
Descriptor: 3'-phosphoadenosine 5'-phosphate phosphatase, CALCIUM ION, PHOSPHATE ION, ...
Authors:Fisher, A.J, Erickson, A.I.
Deposit date:2015-09-02
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound.
Biochemistry, 54, 2015
6RF7
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BU of 6rf7 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the monomeric form, pH 8.9
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
3M3G
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BU of 3m3g by Molmil
Crystal structure of Sm1, an elicitor of plant defence responses from Trichoderma virens.
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Epl1 protein, ...
Authors:Krieger, I.V, Vargas, W.A, Kenerley, C.M, Sacchettini, J.C.
Deposit date:2010-03-09
Release date:2011-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Crystal structure of Sm1, an elicitor of plant defence responses from Trichoderma virens.
To be Published
2V5K
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BU of 2v5k by Molmil
Class II aldolase HpcH - magnesium - oxamate complex
Descriptor: 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE, MAGNESIUM ION, OXAMIC ACID, ...
Authors:Rea, D, Fulop, V, Bugg, T.D.H, Roper, D.I.
Deposit date:2007-07-06
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Mechanism of Hpch: A Metal Ion Dependent Class II Aldolase from the Homoprotocatechuate Degradation Pathway of Escherichia Coli.
J.Mol.Biol., 373, 2007
2V77
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BU of 2v77 by Molmil
Crystal Structure of Human Carboxypeptidase A1
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CARBOXYPEPTIDASE A1, OCTANE-1,3,5,7-TETRACARBOXYLIC ACID, ...
Authors:Pallares, I, Fernandez, D, Comellas-Bigler, M, Fernandez-Recio, J, Ventura, S, Aviles, F.X, Vendrell, J.
Deposit date:2007-07-27
Release date:2008-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Direct interaction between a human digestive protease and the mucoadhesive poly(acrylic acid).
Acta Crystallogr. D Biol. Crystallogr., D64, 2008
6ZR7
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BU of 6zr7 by Molmil
X-ray structure of human Dscam Ig7-Ig9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Down syndrome cell adhesion molecule, ...
Authors:Kozak, S, Bento, I, Meijers, R.
Deposit date:2020-07-11
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Homogeneously N-glycosylated proteins derived from the GlycoDelete HEK293 cell line enable diffraction-quality crystallogenesis.
Acta Crystallogr D Struct Biol, 76, 2020
5I1T
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BU of 5i1t by Molmil
2.6 Angstrom Resolution Crystal Structure of Stage II Sporulation Protein D (SpoIID) from Clostridium difficile in Complex with Triacetylchitotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Nocadello, S, Minasov, G, Shuvalova, L, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-02-05
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of the SpoIID Lytic Transglycosylases Essential for Bacterial Sporulation.
J.Biol.Chem., 291, 2016
4DS7
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BU of 4ds7 by Molmil
Crystal structure of yeast calmodulin bound to the C-terminal fragment of spindle pole body protein Spc110
Descriptor: Calmodulin, GLYCEROL, STRONTIUM ION, ...
Authors:Klenchin, V.A, Rayment, I.
Deposit date:2012-02-18
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The molecular architecture of the yeast spindle pole body core determined by Bayesian integrative modeling.
Mol.Biol.Cell, 28, 2017
3PCO
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BU of 3pco by Molmil
crystal structure of E. coli phenylalanine-tRNA synthetase complexed with phenylalanine and AMP
Descriptor: ADENOSINE MONOPHOSPHATE, PHENYLALANINE, Phenylalanyl-tRNA synthetase, ...
Authors:Mermershtain, I, Finarov, I, Klipcan, L, Kessler, N, Rozenberg, H, Safro, M.G.
Deposit date:2010-10-21
Release date:2011-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Idiosyncrasy and identity in the prokaryotic phe-system: crystal structure of E. coli phenylalanyl-tRNA synthetase complexed with phenylalanine and AMP.
Protein Sci., 20, 2011
3MFF
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BU of 3mff by Molmil
1F1E8hu TCR
Descriptor: ARGININE, GLYCEROL, T cell receptor alpha chain, ...
Authors:van Boxel, G.I, Holmes, S, Fugger, L, Jones, E.Y.
Deposit date:2010-04-02
Release date:2010-06-02
Last modified:2014-03-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:An alternative conformation of the T-cell receptor alpha constant region
J.Mol.Biol., 400, 2010
6ZTA
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BU of 6zta by Molmil
X-ray structure of mutated arabinofuranosidase
Descriptor: Alpha-L-arabinofuranosidase
Authors:Tandrup, T, Lo Leggio, L, Zhao, J, Bissaro, B, Barbe, S, Andre, I, Dumon, C, O'Donohue, M.J, Faure, R.
Deposit date:2020-07-17
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Probing the determinants of the transglycosylation/hydrolysis partition in a retaining alpha-l-arabinofuranosidase.
N Biotechnol, 62, 2021
4KS0
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BU of 4ks0 by Molmil
Pyruvate kinase (PYK) from Trypanosoma cruzi in the presence of Magnesium, oxalate and F26BP
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
Authors:Morgan, H.P, Zhong, W, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-05-17
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014

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