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PDB: 17938 results

8AYL
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BU of 8ayl by Molmil
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 5-[2-(4-fluorophenyl)-7-(4-oxidanylpiperidin-1-yl)pyrazolo[1,5-c]pyrimidin-3-yl]-1,3-dihydroindol-2-one, ...
Authors:Zhang, D, Lape, R, Shaikh, S, Kohegyi, B, Watson, J.F, Cais, O, Nakagawa, T, Greger, I.
Deposit date:2022-09-02
Release date:2023-04-19
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Modulatory mechanisms of TARP gamma 8-selective AMPA receptor therapeutics.
Nat Commun, 14, 2023
7P9B
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BU of 7p9b by Molmil
Providencia stuartii Arginine decarboxylase (Adc), decamer structure
Descriptor: Biodegradative arginine decarboxylase
Authors:Jessop, M, Desfosses, A, Bacia-Verloop, M, Gutsche, I.
Deposit date:2021-07-26
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Structural and biochemical characterisation of the Providencia stuartii arginine decarboxylase shows distinct polymerisation and regulation.
Commun Biol, 5, 2022
8FUK
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BU of 8fuk by Molmil
V. cholerae TniQ-Cascade complex with Type III-B crRNA
Descriptor: CRISPR-associated protein Cas8, Cas6, Cas7, ...
Authors:Chou, C.W, Finkelstein, I.J, Hu, K.
Deposit date:2023-01-17
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:V. cholerae TniQ-Cascade complex with Type III-B crRNA
To be Published
7OP6
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BU of 7op6 by Molmil
Bacteroides thetaiotaomicron mannosidase GH2 with beta-manno-configured cyclophellitol aziridine
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, BROMIDE ION, ...
Authors:McGregor, N.G.S, Beenakker, T.J.M, Kuo, C, Wong, C, Offen, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H.S, Davies, G.J.
Deposit date:2021-05-29
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
5EW2
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BU of 5ew2 by Molmil
Human thrombin sandwiched between two DNA aptamers: HD22 and HD1-deltaT12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, HD1-deltaT12, ...
Authors:Pica, A, Russo Krauss, I, Parente, V, Sica, F.
Deposit date:2015-11-20
Release date:2016-11-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers.
Nucleic Acids Res., 45, 2017
5EXK
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BU of 5exk by Molmil
Crystal structure of M. tuberculosis lipoyl synthase with 6-thiooctanoyl peptide intermediate
Descriptor: 5'-DEOXYADENOSINE, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:McLaughlin, M.I, Lanz, N.D, Goldman, P.J, Lee, K.-H, Booker, S.J, Drennan, C.L.
Deposit date:2015-11-23
Release date:2016-08-10
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystallographic snapshots of sulfur insertion by lipoyl synthase.
Proc.Natl.Acad.Sci.USA, 113, 2016
7LEO
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BU of 7leo by Molmil
C1B domain of Protein kinase C in complex with diacylglycerol-lactone (AJH-836) and 1,2-diheptanoyl-sn-glycero-3-phosphocholine
Descriptor: (4S,7R)-7-(heptanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahexadecan-1-aminium 4-oxide, Protein kinase C delta type, ZINC ION, ...
Authors:Katti, S.S, Krieger, I.
Deposit date:2021-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural anatomy of Protein Kinase C C1 domain interactions with diacylglycerol and other agonists.
Nat Commun, 13, 2022
8FBP
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BU of 8fbp by Molmil
Glutamine synthetase from Pseudomonas aeruginosa, filament double-unit in compressed conformation
Descriptor: Glutamine synthetase
Authors:Phan, I.Q, Staker, B, Shek, R, Moser, T.H, Evans, J.E, van Voorhis, W.C, Myler, P.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-11-29
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Glutamine synthetase from Pseudomonas aeruginosa, filament double-unit in compressed conformation
To Be Published
7OLT
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BU of 7olt by Molmil
Dioxygenase AsqJ in complex with 2 and Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-Methoxydehydrocyclopeptin, BROMIDE ION, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
6XYT
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BU of 6xyt by Molmil
Crystal structure of the O-state of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, GLYCEROL, ...
Authors:Kovalev, K, Gushchin, I, Gordeliy, V.
Deposit date:2020-01-31
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of light-driven sodium pumping.
Nat Commun, 11, 2020
3LFZ
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BU of 3lfz by Molmil
Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gomez-Garcia, I, Oyenarte, I, Kortazar, D, Martinez-Cruz, L.A.
Deposit date:2010-01-19
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.
J.Mol.Biol., 65, 2010
1TL1
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BU of 1tl1 by Molmil
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW451211
Descriptor: 6-CHLORO-4-(CYCLOHEXYLSULFINYL)-3-PROPYLQUINOLIN-2(1H)-ONE, PHOSPHATE ION, Pol polyprotein, ...
Authors:Hopkins, A.L, Ren, J, Stuart, D.I, Stammers, D.K.
Deposit date:2004-06-09
Release date:2004-12-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 1.
J.Med.Chem., 47, 2004
6XIZ
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BU of 6xiz by Molmil
Crystal structure of multi-copper oxidase from Pediococcus acidilactici
Descriptor: BENZAMIDINE, CHLORIDE ION, COPPER (II) ION, ...
Authors:Pardo, I, Soares, A.S, Collins, R, Partowmah, S.H, Coler, E.A.
Deposit date:2020-06-22
Release date:2021-03-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species.
Microb Biotechnol, 14, 2021
7OSO
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BU of 7oso by Molmil
The crystal structure of Erwinia tasmaniensis levansucrase in complex with (S)-1,2,4-butanentriol
Descriptor: (2~{S})-butane-1,2,4-triol, Levansucrase (Beta-D-fructofuranosyl transferase), ZINC ION
Authors:Polsinelli, I, Salomone-Stagni, M, Benini, S.
Deposit date:2021-06-09
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Erwinia tasmaniensis levansucrase shows enantiomer selection for (S)-1,2,4-butanetriol.
Acta Crystallogr.,Sect.F, 78, 2022
8DQG
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BU of 8dqg by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to AMPPNP and acridone
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
8DQI
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BU of 8dqi by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 2- weeks of crystal growth
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
8DQH
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BU of 8dqh by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 24 hours of crystal growth
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
8DQJ
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BU of 8dqj by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (AST) bound to ATP and acridone
Descriptor: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE MONOPHOSPHATE, ...
Authors:Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B.
Deposit date:2022-07-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
Acs Chem.Biol., 17, 2022
7OLA
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BU of 7ola by Molmil
Structure of Primase-Helicase in SaPI5
Descriptor: DNA primase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Qiao, C.C, Mir-Sanchis, I.
Deposit date:2021-05-19
Release date:2022-07-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility.
Nucleic Acids Res., 50, 2022
6PH2
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BU of 6ph2 by Molmil
Complete LOV domain from the LOV-HK sensory protein from Brucella abortus (mutant C69S, construct 15-155)
Descriptor: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
Authors:Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
Deposit date:2019-06-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
7OM0
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BU of 7om0 by Molmil
Structure of Primase-Helicase in SaPI5
Descriptor: DNA primase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Qiao, C.C, Mir-Sanchis, I.
Deposit date:2021-05-21
Release date:2022-07-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility.
Nucleic Acids Res., 50, 2022
8QSQ
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BU of 8qsq by Molmil
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S2'
Authors:Ren, J, Stuart, D.I, Duyvesteyn, H.M.E.
Deposit date:2023-10-11
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024
7OJU
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BU of 7oju by Molmil
Chaetomium thermophilum Naa50 GNAT-domain in complex with bisubstrate analogue CoA-Ac-MVNAL
Descriptor: CARBOXYMETHYL COENZYME *A, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Weidenhausen, J, Kopp, J, Sinning, I.
Deposit date:2021-05-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Extended N-Terminal Acetyltransferase Naa50 in Filamentous Fungi Adds to Naa50 Diversity.
Int J Mol Sci, 23, 2022
4X9P
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BU of 4x9p by Molmil
Crystal structure of bovine Annexin A2
Descriptor: Annexin A2, CALCIUM ION, CHLORIDE ION
Authors:Shumilin, I.A, Hollas, H, Vedeler, A, Kretsinger, R.H.
Deposit date:2014-12-11
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The native structure of annexin A2 peptides in hydrophilic environment determines their anti-angiogenic effects.
Biochem. Pharmacol., 95, 2015
7P3L
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BU of 7p3l by Molmil
Isopenicillin N synthase in complex with Fe and the substrate analogue AadCyshomoCys
Descriptor: 2-AMINOHEXANEDIOIC ACID, CYSTEINE, D-homocysteine, ...
Authors:Rabe, P, Clifton, I, Schofield, C.J.
Deposit date:2021-07-08
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Isopenicillin N synthase in complex with Fe and the substrate analogue AadCyshomoCys
To Be Published

225946

數據於2024-10-09公開中

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