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PDB: 17898 results

4IHP
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Crystal structure of TgCDPK1 with inhibitor bound
Descriptor: 1-tert-butyl-3-(3-chlorophenoxy)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1, UNKNOWN ATOM OR ION
Authors:El Bakkouri, M, Tempel, W, Crandall, I.E, Massad, T, Loppnau, P, Graslund, S, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Kain, C.K, Shokat, K.M, Sibley, L.D, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2012-12-19
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of TgCDPK1 with inhibitor bound
TO BE PUBLISHED
3VO9
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BU of 3vo9 by Molmil
Staphylococcus aureus FtsZ apo-form (SeMet)
Descriptor: Cell division protein FtsZ
Authors:Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VZR
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Crystal structure of T173S mutant of PhaB from Ralstonia eutropha
Descriptor: Acetoacetyl-CoA reductase
Authors:Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
Deposit date:2012-10-15
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
3VIP
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BU of 3vip by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Descriptor: 2-{4-[3-(5H-dibenzo[b,f]azepin-5-yl)propyl]piperazin-1-yl}ethyl beta-D-glucopyranoside, 5H-dibenzo[b,f]azepine, Beta-glucosidase, ...
Authors:Jeng, W.Y, Liu, C.I, Wang, A.H.J.
Deposit date:2011-10-03
Release date:2012-07-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VIJ
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Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glucose
Descriptor: Beta-glucosidase, CHLORIDE ION, GLYCEROL, ...
Authors:Jeng, W.Y, Liu, C.I, Wang, A.H.J.
Deposit date:2011-10-03
Release date:2012-07-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VJ8
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Crystal structure of the human squalene synthase
Descriptor: Squalene synthase
Authors:Liu, C.I, Jeng, W.Y, Chang, W.J, Wang, A.H.J.
Deposit date:2011-10-14
Release date:2012-04-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Binding modes of zaragozic acid A to human squalene synthase and staphylococcal dehydrosqualene synthase
J.Biol.Chem., 287, 2012
4L4S
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BU of 4l4s by Molmil
Structural characterisation of the NADH binary complex of human lactate dehydrogenase M isozyme
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-lactate dehydrogenase A chain
Authors:Dempster, S, Harper, S, Moses, J.E, Dreveny, I.
Deposit date:2013-06-09
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural characterization of the apo form and NADH binary complex of human lactate dehydrogenase.
Acta Crystallogr.,Sect.D, 70, 2014
4L55
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X-ray structure of the adduct between bovine pancreatic ribonuclease and AziRu
Descriptor: RUTHENIUM ION, Ribonuclease pancreatic
Authors:Vergara, A, Russo Krauss, I, Merlino, A.
Deposit date:2013-06-10
Release date:2014-01-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Investigating the ruthenium metalation of proteins: X-ray structure and Raman microspectroscopy of the complex between RNase A and AziRu.
Inorg.Chem., 52, 2013
4LFH
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Crystal Structure of 9C2 TCR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9C2 TCR delta chain, 9C2 TCR gamma chain, ...
Authors:Uldrich, A.P, Le Nours, J, Pellicci, D.G, Gras, S, Rossjohn, J, Godfrey, D.I.
Deposit date:2013-06-26
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CD1d-lipid antigen recognition by the gamma delta TCR.
Nat.Immunol., 14, 2013
3VZM
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Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) E172H mutant with Glu78 covalently bonded to 2-deoxy-2-fluoro-xylobiose
Descriptor: Endo-1,4-beta-xylanase, beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol
Authors:Ludwiczek, M.L, D'Angelo, I, Yalloway, G.N, Okon, M, Nielsen, J.E, Strynadka, N.C, Withers, S.G, McIntosh, L.P.
Deposit date:2012-10-15
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase
Biochemistry, 52, 2013
4JG7
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Structure of RSK2 CTD bound to 3-(3-(1H-pyrrolo[2,3-b]pyridine-3-carbonyl)phenyl)-2-cyanoacrylamide
Descriptor: (2R)-2-cyano-3-[3-(1H-pyrrolo[2,3-b]pyridin-3-ylcarbonyl)phenyl]propanamide, Ribosomal protein S6 kinase alpha-3, SODIUM ION
Authors:Miller, R.M, Paavilainen, V.O, Krishnan, S, Serafimova, I.M, Taunton, J.
Deposit date:2013-02-28
Release date:2013-04-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.0002 Å)
Cite:Electrophilic fragment-based design of reversible covalent kinase inhibitors.
J.Am.Chem.Soc., 135, 2013
3VZO
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BU of 3vzo by Molmil
Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35H mutant with Glu78 covalently bonded to 2-deoxy-2-fluoro-xylobiose
Descriptor: Endo-1,4-beta-xylanase, SULFATE ION, beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol
Authors:Ludwiczek, M.L, D'Angelo, I, Yalloway, G.N, Okon, M, Nielsen, J.E, Strynadka, N.C, Withers, S.G, McIntosh, L.P.
Deposit date:2012-10-15
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase
Biochemistry, 52, 2013
3VZK
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Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35E mutant
Descriptor: Endo-1,4-beta-xylanase, SULFATE ION
Authors:Ludwiczek, M.L, D'Angelo, I, Yalloway, G.N, Okon, M, Nielsen, J.E, Strynadka, N.C, Withers, S.G, McIntosh, L.P.
Deposit date:2012-10-14
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase
Biochemistry, 52, 2013
4JPL
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BU of 4jpl by Molmil
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with 4-Azaindole
Descriptor: 1H-pyrrolo[3,2-b]pyridine, Cytochrome c peroxidase, PHOSPHATE ION, ...
Authors:Boyce, S.E, Fischer, M, Fish, I.
Deposit date:2013-03-19
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Blind prediction of charged ligand binding affinities in a model binding site.
J.Mol.Biol., 425, 2013
4JQK
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Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with 2-(2-aminopyridin-1-ium-1-yl)ethanol
Descriptor: 2-(2-aminopyridin-1-ium-1-yl)ethanol, Cytochrome c peroxidase, PHOSPHATE ION, ...
Authors:Boyce, S.E, Fischer, M, Fish, I.
Deposit date:2013-03-20
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Blind prediction of charged ligand binding affinities in a model binding site.
J.Mol.Biol., 425, 2013
4JPT
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BU of 4jpt by Molmil
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine
Descriptor: Cytochrome c peroxidase, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Boyce, S.E, Fischer, M, Fish, I.
Deposit date:2013-03-19
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Blind prediction of charged ligand binding affinities in a model binding site.
J.Mol.Biol., 425, 2013
3WA1
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BU of 3wa1 by Molmil
Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus
Descriptor: BinB protein
Authors:Srisucharitpanit, K, Yao, M, Chimnaronk, S, Promdonkoy, B, Boonserm, P, Tanaka, I.
Deposit date:2013-04-22
Release date:2014-07-02
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus
Proteins, 82, 2014
3WBK
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crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex
Descriptor: Eukaryotic translation initiation factor 1A, Eukaryotic translation initiation factor 5B
Authors:Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M.
Deposit date:2013-05-20
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A
Acta Crystallogr.,Sect.D, 70, 2014
4L11
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BU of 4l11 by Molmil
Structure of the C-linker/CNBHD of agERG channels
Descriptor: AGAP007709-PA
Authors:Brelidze, T.I.
Deposit date:2013-06-01
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of the C-terminal region of an ERG channel and functional implications.
Proc.Natl.Acad.Sci.USA, 110, 2013
4L9N
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BU of 4l9n by Molmil
Crystal structure of MepR A103V mutant from multidrug resistant S. aureus clinical isolate
Descriptor: MepR, SULFATE ION
Authors:Birukou, I, Brennan, R.G.
Deposit date:2013-06-18
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus.
MBio, 4, 2013
4KY0
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BU of 4ky0 by Molmil
Crystal structure of a substrate-free glutamate transporter homologue from Thermococcus kodakarensis
Descriptor: Proton/glutamate symporter, SDF family, TETRAETHYLENE GLYCOL
Authors:Guskov, A, Jensen, S, Rempel, S, Hanelt, I, Slotboom, D.J.
Deposit date:2013-05-28
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a substrate-free aspartate transporter.
Nat.Struct.Mol.Biol., 20, 2013
4KZ4
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BU of 4kz4 by Molmil
Crystal structure of AmpC beta-lactamase in complex with fragment 60 (2-[(propylsulfonyl)amino]benzoic acid)
Descriptor: 2-[(propylsulfonyl)amino]benzoic acid, Beta-lactamase, PHOSPHATE ION
Authors:Eidam, O, Barelier, S, Fish, I, Shoichet, B.K.
Deposit date:2013-05-29
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Increasing chemical space coverage by combining empirical and computational fragment screens.
Acs Chem.Biol., 9, 2014
3WEH
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BU of 3weh by Molmil
Crystal structure of the human squalene synthase in complex with presqualene pyrophosphate
Descriptor: MAGNESIUM ION, Squalene synthase, {(1R,2R,3R)-2-[(3E)-4,8-dimethylnona-3,7-dien-1-yl]-2-methyl-3-[(1E,5E)-2,6,10-trimethylundeca-1,5,9-trien-1-yl]cyclopropyl}methyl trihydrogen diphosphate
Authors:Liu, C.I, Jeng, W.Y, Wang, A.H.J.
Deposit date:2013-07-07
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural insights into the catalytic mechanism of human squalene synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4L9B
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BU of 4l9b by Molmil
Structure of native RBP from lactococcal phage 1358 (CsI derivative)
Descriptor: CESIUM ION, Receptor Binding Protein
Authors:Farenc, C, Spinelli, S, Bebeacua, C, Tremblay, D, Orlov, I, Blangy, S, Klaholz, B.P, Moineau, S, Cambillau, C.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism
To be Published
4LDQ
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Crystal Structure of the Mediator of Rho Dependent Invasion
Descriptor: Methylthioribose-1-phosphate isomerase
Authors:Sousa, M.C, Templeton, P.D, Metzner, S.I.
Deposit date:2013-06-24
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Structure of Mediator of RhoA-Dependent Invasion (MRDI) Explains Its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion.
Biochemistry, 52, 2013

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