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PDB: 17822 results

4E2V
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BU of 4e2v by Molmil
tRNA-guanine transglycosylase Y106F, C158V mutant in complex with preQ1
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Schmidt, I, Reuter, K, Klebe, G, Heine, A, Tidten, N.
Deposit date:2012-03-09
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor.
Plos One, 8, 2013
6IQR
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BU of 6iqr by Molmil
Crystal structure of Prc with S452I and L252Y mutations
Descriptor: Tail-specific protease
Authors:Chueh, C.K, Chang, C.I.
Deposit date:2018-11-08
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
4HS7
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BU of 4hs7 by Molmil
2.6 Angstrom Structure of the Extracellular Solute-binding Protein from Staphylococcus aureus in complex with PEG.
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Bacterial extracellular solute-binding protein, putative, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-10-29
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:2.6 Angstrom Structure of the Extracellular Solute-binding Protein from Staphylococcus aureus in complex with PEG.
TO BE PUBLISHED
6IQS
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BU of 6iqs by Molmil
Crystal structure of Prc with L245A and L340G mutations in complex with NlpI
Descriptor: Lipoprotein NlpI, Tail-specific protease
Authors:Chuech, C.K, Chang, C.I.
Deposit date:2018-11-08
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
5IWT
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BU of 5iwt by Molmil
Structure of Transient Receptor Potential (TRP) channel TRPV6 in the presence of gadolinium
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, GADOLINIUM ATOM, Transient receptor potential cation channel subfamily V member 6
Authors:Saotome, K, Singh, A.K, Yelshanskaya, M.V, Sobolevsky, A.I.
Deposit date:2016-03-22
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of the epithelial calcium channel TRPV6.
Nature, 534, 2016
5J7N
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BU of 5j7n by Molmil
Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high order structure
Descriptor: Low molecular weight heat shock protein
Authors:Fonseca, E.M.B, Scorsato, V, dos Santos, C.A, Tomazini Jr, A, Aparicio, R, Polikarpov, I.
Deposit date:2016-04-06
Release date:2017-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high-order structure.
Acta Crystallogr F Struct Biol Commun, 73, 2017
4XZY
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BU of 4xzy by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Descriptor: GLYCEROL, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
6S0Y
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BU of 6s0y by Molmil
Nanobody targeting influenza A matrix protein 2 ectodomain (M2e)
Descriptor: M2e-VHH-23m, Matrix protein 2
Authors:Van Molle, I, De Vlieger, D, Schepens, B, Remaut, H, Saelens, X.
Deposit date:2019-06-18
Release date:2020-01-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Selective Engagement of Fc gamma RIV by a M2e-Specific Single Domain Antibody Construct Protects Against Influenza A Virus Infection.
Front Immunol, 10, 2019
5J05
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BU of 5j05 by Molmil
DIY G-Quadruplexes: Solution structure of d(GGGTTTGGGTTTTGGGAGGG) in sodium
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3')
Authors:Dvorkin, S.A, Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2016-03-27
Release date:2017-04-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
6S3J
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BU of 6s3j by Molmil
Crystal Structure of lipase from Geobacillus stearothermophilus T6 variant E134C/F149C
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Gihaz, S, Bash, Y, Rush, I, Shahar, A, Pazy, Y, Fishman, A.
Deposit date:2019-06-25
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Bridges to Stability: Engineering Disulfide Bonds Towards Enhanced Lipase Biodiesel Synthesis
Chemcatchem, 2019
3A57
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BU of 3a57 by Molmil
Crystal structure of Thermostable Direct Hemolysin
Descriptor: Thermostable direct hemolysin 2
Authors:Hashimoto, H, Yanagihara, I, Nakahira, K, Hamada, D, Ikegami, T, Mayanagi, K, Kaieda, S, Fukui, T, Ohnishi, K, Kajiyama, S, Yamane, T, Ikeguchi, M, Honda, T, Shimizu, T, Sato, M.
Deposit date:2009-08-03
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and functional characterization of Vibrio parahaemolyticus thermostable direct hemolysin
J.Biol.Chem., 285, 2010
4XZS
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BU of 4xzs by Molmil
Crystal Structure of TRIAP1-MBP fusion
Descriptor: Maltose-binding periplasmic protein,TP53-regulated inhibitor of apoptosis 1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Miliara, X, Garnett, J.A, Abid-Ali, F, Perez-Dorado, I, Matthews, S.J.
Deposit date:2015-02-04
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural insight into the TRIAP1/PRELI-like domain family of mitochondrial phospholipid transfer complexes.
Embo Rep., 16, 2015
5IWK
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BU of 5iwk by Molmil
Structure of Transient Receptor Potential (TRP) channel TRPV6
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, CALCIUM ION, Transient receptor potential cation channel subfamily V member 6
Authors:Saotome, K, Singh, A.K, Yelshanskaya, M.V, Sobolevsky, A.I.
Deposit date:2016-03-22
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.247 Å)
Cite:Crystal structure of the epithelial calcium channel TRPV6.
Nature, 534, 2016
4EKV
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BU of 4ekv by Molmil
Streptavidin 8-aa-loop H127C mutein with reversible biotin binding
Descriptor: BIOTIN, CHLORIDE ION, Streptavidin
Authors:Barrette-Ng, I.H, Honetschlaeger, C, Wong, S.L, Ng, K.K.S.
Deposit date:2012-04-09
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of a tetrameric streptavidin mutein with reversible biotin binding capability: engineering a mobile loop as an exit door for biotin.
Plos One, 7, 2012
4HSH
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BU of 4hsh by Molmil
tRNA-guanine transglycosylase Y106F, V233G mutant in complex with queuine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Biela, I, Tidten-Luksch, N, Heine, A, Reuter, K, Klebe, G.
Deposit date:2012-10-30
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor.
Plos One, 8, 2013
4XPL
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BU of 4xpl by Molmil
The crystal structure of Campylobacter jejuni N-acetyltransferase PseH in complex with acetyl coenzyme A
Descriptor: ACETYL COENZYME *A, N-Acetyltransferase, PseH
Authors:Song, W.S, Nam, M.S, Namgung, B, Yoon, S.I.
Deposit date:2015-01-17
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of PseH, the Campylobacter jejuni N-acetyltransferase involved in bacterial O-linked glycosylation.
Biochem.Biophys.Res.Commun., 458, 2015
4XPY
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BU of 4xpy by Molmil
Crystal structure of hemerythrin : L114Y mutant
Descriptor: Bacteriohemerythrin, FE (II) ION, GLYCEROL
Authors:Chuankhayan, P, Chen, K.H.C, Wu, H.H, Chen, C.J, Fukuda, M, Yu, S.S.F, Chan, S.I.
Deposit date:2015-01-18
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:The bacteriohemerythrin from Methylococcus capsulatus (Bath): Crystal structures reveal that Leu114 regulates a water tunnel.
J.Inorg.Biochem., 150, 2015
6I9B
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BU of 6i9b by Molmil
NMR structure of the La module from human LARP4A
Descriptor: La-related protein 4
Authors:Conte, M.R, Martino, L, Atkinson, R.A, Kelly, G, Cruz-Gallardo, I, De Tito, S, Trotta, R.
Deposit date:2018-11-22
Release date:2019-03-13
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:LARP4A recognizes polyA RNA via a novel binding mechanism mediated by disordered regions and involving the PAM2w motif, revealing interplay between PABP, LARP4A and mRNA.
Nucleic Acids Res., 47, 2019
5U49
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BU of 5u49 by Molmil
Wild-type Transthyretin in complex with 5-[(1E)-2-(2-Chloro-4-hydroxyphenyl)ethenyl]-1,3-benzenediol
Descriptor: 5-[(E)-2-(2-chloro-4-hydroxyphenyl)ethenyl]benzene-1,3-diol, Transthyretin
Authors:Windsor, I.W, Smith, T.P, Raines, R.T, Forest, K.T.
Deposit date:2016-12-03
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
J. Med. Chem., 60, 2017
5JBO
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BU of 5jbo by Molmil
Trichoderma harzianum GH1 beta-glucosidase ThBgl2
Descriptor: Beta-glucosidase
Authors:Florindo, R.N, Mutti, H.S, Polikarpov, I, Nascimento, A.S.
Deposit date:2016-04-13
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insights into beta-glucosidase transglycosylation based on biochemical, structural and computational analysis of two GH1 enzymes from Trichoderma harzianum.
N Biotechnol, 40, 2018
4Y01
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BU of 4y01 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Descriptor: GLYCEROL, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
4Y0P
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BU of 4y0p by Molmil
Bovine beta-lactoglobulin complex with tetracaine (BLG-TET)
Descriptor: Beta-lactoglobulin, Tetracaine
Authors:Loch, J.I, Bonarek, P, Polit, A, Jablonski, M, Czub, M, Ye, X, Lewinski, K.
Deposit date:2015-02-06
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:beta-Lactoglobulin interactions with local anaesthetic drugs - Crystallographic and calorimetric studies.
Int.J.Biol.Macromol., 80, 2015
4Y02
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BU of 4y02 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground)
Descriptor: GLYCEROL, POTASSIUM ION, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
5JFP
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BU of 5jfp by Molmil
HIV-1 wild Type protease with GRL-097-13A (a Adamantane P1-Ligand with bis-THF in P2 and isobutylamine in P1')
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
6RPV
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BU of 6rpv by Molmil
Extremely stable monomeric variant of human cystatin C with single amino acid substitution
Descriptor: Cystatin-C
Authors:Zhukov, I, Rodziewicz-Motowidlo, S, Maszota-Zieleniak, M, Jurczak, P, Kozak, M.
Deposit date:2019-05-14
Release date:2019-07-31
Last modified:2023-06-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution.
Febs J., 287, 2020

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