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PDB: 17892 results

8Z76
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BU of 8z76 by Molmil
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 during 6 months
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, SODIUM ION, ...
Authors:Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O.
Deposit date:2024-04-19
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2
To Be Published
1YJ7
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BU of 1yj7 by Molmil
Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ
Descriptor: GLYCEROL, PHOSPHATE ION, escJ
Authors:Yip, C.K, Kimbrough, T.G, Felise, H.B, Vuckovic, M, Thomas, N.A, Pfuetzner, R.A, Frey, E.A, Finlay, B.B, Miller, S.I, Strynadka, N.C.J.
Deposit date:2005-01-13
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the molecular platform for type III secretion system assembly.
Nature, 435, 2005
1KWW
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BU of 1kww by Molmil
Rat mannose protein A complexed with a-Me-Fuc.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KX1
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BU of 1kx1 by Molmil
Rat mannose protein A complexed with Man6-GlcNAc2-Asn
Descriptor: CALCIUM ION, MANNOSE-BINDING PROTEIN A, alpha-D-mannopyranose, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KWU
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BU of 1kwu by Molmil
Rat mannose binding protein A complexed with a-Me-Man
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
9B34
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BU of 9b34 by Molmil
Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two ConA dimers. Type I interface between GluK2 ligand-binding domain and ConA
Descriptor: CALCIUM ION, Concanavalin A, ZINC ION
Authors:Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
Deposit date:2024-03-18
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
2IW4
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BU of 2iw4 by Molmil
CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP
Descriptor: FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ...
Authors:Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
Deposit date:2006-06-26
Release date:2006-11-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase.
J.Biol.Chem., 282, 2007
8ZN4
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BU of 8zn4 by Molmil
Crystal structure of Poly(ethylene glycol) stabilized erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 2.30 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, ...
Authors:Viswanathan, V, Kumari, A, Singh, A, Kumar, A, Sharma, P, Chopra, S, Sharma, S, Raje, C.I, Singh, T.P.
Deposit date:2024-05-25
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Poly(ethylene glycol) stabilized erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 2.30 A resolution
To Be Published
2IKC
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BU of 2ikc by Molmil
Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Sheikh, I.A, Singh, N, Singh, A.K, Sharma, S, Singh, T.P.
Deposit date:2006-10-02
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate
To be Published
1KSM
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BU of 1ksm by Molmil
AVERAGE NMR SOLUTION STRUCTURE OF CA LN CALBINDIN D9K
Descriptor: LANTHANUM (III) ION, VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN
Authors:Bertini, I, Donaire, A, Luchinat, C, Piccioli, M, Poggi, L, Parigi, G, Jimenez, B.
Deposit date:2002-01-14
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.
J.Biomol.NMR, 21, 2001
1KQV
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BU of 1kqv by Molmil
Family of NMR Solution Structures of Ca Ln Calbindin D9K
Descriptor: LANTHANUM (III) ION, VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN
Authors:Bertini, I, Donaire, A, Jimenez, B, Luchinat, C, Parigi, G, Piccioli, M, Poggi, L.
Deposit date:2002-01-08
Release date:2002-01-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.
J.Biomol.NMR, 21, 2001
1KVL
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BU of 1kvl by Molmil
X-ray Crystal Structure of AmpC S64G Mutant beta-Lactamase in Complex with Substrate and Product Forms of Cephalothin
Descriptor: 2-[CARBOXY-(2-THIOPHEN-2-YL-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, 2-[CARBOXY-(2-THIOPHEN-2-YL-ACETYLAMINO)-METHYL]-5-METHYLENE-5,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase, ...
Authors:Beadle, B.M, Trehan, I, Focia, P.J, Shoichet, B.K.
Deposit date:2002-01-27
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural milestones in the reaction pathway of an amide hydrolase: substrate, acyl, and product complexes of cephalothin with AmpC beta-lactamase.
Structure, 10, 2002
1YN8
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BU of 1yn8 by Molmil
SH3 domain of yeast NBP2
Descriptor: CALCIUM ION, NAP1-binding protein 2
Authors:Kursula, P, Kursula, I, Song, Y.H, Wilmanns, M.
Deposit date:2005-01-24
Release date:2006-05-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the yeast SH3 domain proteome
To be Published
1KWY
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BU of 1kwy by Molmil
Rat mannose protein A complexed with man-a13-man.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
3NS0
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BU of 3ns0 by Molmil
X-ray structure of bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Borshchevskiy, V.I.
Deposit date:2010-07-01
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-ray-Radiation-Induced Changes in Bacteriorhodopsin Structure.
J.Mol.Biol., 409, 2011
4UQM
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BU of 4uqm by Molmil
Crystal structure determination of uracil-DNA N-glycosylase (UNG) from Deinococcus radiodurans in complex with DNA - new insights into the role of the Leucine-loop for damage recognition and repair
Descriptor: 5'-D(*CP*CP*TP*AP*TP*CP*CP*AP*AAB*GP*TP*CP*TP*CP*CP*G)-3', 5'-D(*GP*CP*GP*GP*AP*GP*AP*CP*AP*TP*GP*GP*AP*CP*AP*G)-3', CHLORIDE ION, ...
Authors:Pedersen, H.L, Johnson, K.A, McVey, C.E, Leiros, I, Moe, E.
Deposit date:2014-06-24
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure determination of uracil-DNA N-glycosylase from Deinococcus radiodurans in complex with DNA.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
6TJB
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BU of 6tjb by Molmil
Crystal structure of the computationally designed Cake2 protein
Descriptor: Cake2, GLYCEROL
Authors:Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
6TJI
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BU of 6tji by Molmil
Crystal structure of the computationally designed Cake10 protein
Descriptor: Cake10, PHOSPHATE ION
Authors:Laier, I, Mylemans, B, Voet, A.R.D, Noguchi, H.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
4WE2
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BU of 4we2 by Molmil
Donor strand complemented FaeG of F4ab fimbriae
Descriptor: K88 fimbrial protein AB
Authors:Moonens, K, Van den Broeck, I, De Kerpel, M, Deboeck, F, Raymaekers, H, Remaut, H, De Greve, H.
Deposit date:2014-09-09
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Insight into the Carbohydrate Receptor Binding of F4 Fimbriae-producing Enterotoxigenic Escherichia coli.
J.Biol.Chem., 290, 2015
4W5W
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BU of 4w5w by Molmil
Rubisco activase from Arabidopsis thaliana
Descriptor: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, SULFATE ION
Authors:Hasse, D, Larsson, A.M, Andersson, I.
Deposit date:2014-08-19
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Arabidopsis thaliana Rubisco activase
Acta Crystallogr.,Sect.D, 71, 2015
6T46
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BU of 6t46 by Molmil
Structure of the Rap conjugation gene regulator of the plasmid pLS20 in complex with the Phr* peptide
Descriptor: CHLORIDE ION, Quorum-sensing secretion protein (processed), Response regulator aspartate phosphatase, ...
Authors:Crespo, I, Bernardo, N, Meijer, W.J.J, Boer, D.R.
Deposit date:2019-10-12
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inactivation of the dimeric RappLS20 anti-repressor of the conjugation operon is mediated by peptide-induced tetramerization.
Nucleic Acids Res., 48, 2020
4UX6
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BU of 4ux6 by Molmil
The discovery of novel, potent and highly selective inhibitors of inducible nitric oxide synthase (iNOS)
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, NITRIC OXIDE SYNTHASE, INDUCIBLE, ...
Authors:Cheshire, D.R, Andrews, G, Beaton, H.G, Birkinshaw, T, Boughton-Smith, N, Connolly, S, Cook, T.R, Cooper, A, Cooper, S.L, Cox, D, Dixon, J, Gensmantel, N, Hamley, P.J, Harrison, R, Hartopp, P, Kack, H, Luker, T, Mete, A, Millichip, I, Nicholls, D.J, Pimm, A.D, St-Gallay, S.A, Wallace, A.V.
Deposit date:2014-08-19
Release date:2014-10-08
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Discovery of Novel, Potent and Highly Selective Inhibitors of Inducible Nitric Oxide Synthase (Inos).
Bioorg.Med.Chem.Lett., 21, 2011
4UV0
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BU of 4uv0 by Molmil
Structure of a semisynthetic phosphorylated DAPK
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, TRIETHYLENE GLYCOL
Authors:de Diego, I, Rios, P, Meyer, C, Koehn, M, Wilmanns, M.
Deposit date:2014-08-01
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Molecular Mechanisms Behind Dapk Regulation: How the Phosphorylation Activity Switch Works
To be Published
6TJF
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BU of 6tjf by Molmil
Crystal structure of the computationally designed Cake6 protein
Descriptor: Cake6, GLYCEROL
Authors:Mylemans, B, Laier, I, Voet, A.R.D, Noguchi, H.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
6TJH
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BU of 6tjh by Molmil
Crystal structure of the computationally designed Cake9 protein
Descriptor: Cake9, GLYCEROL, SULFATE ION
Authors:Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021

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