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PDB: 17938 results

7AFN
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BU of 7afn by Molmil
Bacterial 30S ribosomal subunit assembly complex state B (head domain)
Descriptor: 16SrRNA (head domain of the 30S ribosome), 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7AFD
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BU of 7afd by Molmil
Bacterial 30S ribosomal subunit assembly complex state A (head domain)
Descriptor: 16SrRNA of the head domain (residue C931 to G1386), 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7AF8
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BU of 7af8 by Molmil
Bacterial 30S ribosomal subunit assembly complex state E (head domain)
Descriptor: 16SrRNA (head domain of the 30S ribosome, 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7AFA
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BU of 7afa by Molmil
Bacterial 30S ribosomal subunit assembly complex state F (head domain)
Descriptor: 16SrRNA (head domain of the 30S ribosome), 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Kaminishi, T, Diercks, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7AFH
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BU of 7afh by Molmil
Bacterial 30S ribosomal subunit assembly complex state C (head domain)
Descriptor: 16SrRNA (head domain of the 30S ribosome), 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7AFK
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BU of 7afk by Molmil
Bacterial 30S ribosomal subunit assembly complex state D (head domain)
Descriptor: 16SrRNA (head domain of the 30S ribosome), 30S ribosomal protein S10, 30S ribosomal protein S13, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2020-09-19
Release date:2021-07-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
2HD0
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BU of 2hd0 by Molmil
Structure of the catalytic domain of hepatitis C virus NS2
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, Protease NS2-3 (p23), octyl beta-D-glucopyranoside
Authors:Lorenz, I.C, Rice, C.M, Marcotrigiano, J.
Deposit date:2006-06-19
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of the catalytic domain of the hepatitis C virus NS2-3 protease.
Nature, 442, 2006
7AT5
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BU of 7at5 by Molmil
Structure of protein kinase ck2 catalytic subunit (csnk2a1 gene product) in complex with the bivalent inhibitor KN2
Descriptor: 1,2-ETHANEDIOL, 2-(3,4-dichlorophenyl)ethanamine, Casein kinase II subunit alpha, ...
Authors:Lindenblatt, D, Applegate, V, Nickelsen, A, Klussmann, M, Neundorf, I, Goetz, C, Jose, J, Niefind, K.
Deposit date:2020-10-29
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular Plasticity of Crystalline CK2 alpha ' Leads to KN2, a Bivalent Inhibitor of Protein Kinase CK2 with Extraordinary Selectivity.
J.Med.Chem., 65, 2022
7AT9
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BU of 7at9 by Molmil
Structure of protein kinase ck2 catalytic subunit (csnk2a2 gene product) in complex with the ATP-competitive inhibitor MB002 and the alphaD-pocket ligand 3,4-dichlorophenethylamine
Descriptor: 1,2-ETHANEDIOL, 2-(3,4-dichlorophenyl)ethanamine, 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol, ...
Authors:Lindenblatt, D, Applegate, V, Nickelsen, A, Klussmann, M, Neundorf, I, Goetz, C, Jose, J, Niefind, K.
Deposit date:2020-10-29
Release date:2021-08-04
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Molecular Plasticity of Crystalline CK2 alpha ' Leads to KN2, a Bivalent Inhibitor of Protein Kinase CK2 with Extraordinary Selectivity.
J.Med.Chem., 65, 2022
5T3O
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BU of 5t3o by Molmil
Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ribose-phosphate pyrophosphokinase, SULFATE ION
Authors:Timofeev, V.I, Sinitsyna, E.V, Abramchik, Y.A, Kostromina, M.A, Esipov, R.S, Kuranova, I.P.
Deposit date:2016-08-26
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of recombinant phosphoribosylpyrophosphate synthetase 2 from Thermus thermophilus HB27 complexed with ADP and sulfate ions.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5MZ2
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BU of 5mz2 by Molmil
Rubisco from Thalassiosira antarctica
Descriptor: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Andersson, I, Valegard, K.
Deposit date:2017-01-30
Release date:2018-02-14
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications.
J. Biol. Chem., 293, 2018
6PT8
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BU of 6pt8 by Molmil
Crystal Structure of CobT from Methanocaldococcus jannaschii in complex with Adenine Alpha-Ribotide and Nicotinic Acid
Descriptor: ALPHA-ADENOSINE MONOPHOSPHATE, NICOTINIC ACID, PHOSPHATE ION, ...
Authors:Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante, J.C, Rayment, I.
Deposit date:2019-07-15
Release date:2020-07-22
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria.
Sci Rep, 12, 2022
7U2D
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BU of 7u2d by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADG20 heavy chain, ADG20 light chain, ...
Authors:Zhu, X, Yuan, M, Wilson, I.A.
Deposit date:2022-02-23
Release date:2022-05-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:A broad and potent neutralization epitope in SARS-related coronaviruses.
Proc.Natl.Acad.Sci.USA, 119, 2022
1K5V
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BU of 1k5v by Molmil
Human acidic fibroblast growth factor. 141 amino acid form with amino terminal His tag with Asn106 replaced by Gly (N106G).
Descriptor: Acidic fibroblast growth factor, SULFATE ION
Authors:Kim, J, Blaber, S.I, Blaber, M.
Deposit date:2001-10-12
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Alternative type I and I' turn conformations in the beta8/beta9 beta-hairpin of human acidic fibroblast growth factor.
Protein Sci., 11, 2002
1FD8
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BU of 1fd8 by Molmil
SOLUTION STRUCTURE OF THE CU(I) FORM OF THE YEAST METALLOCHAPERONE, ATX1
Descriptor: ATX1 COPPER CHAPERONE, COPPER (I) ION
Authors:Arnesano, F, Banci, L, Bertini, I, Huffman, D.L, O'Halloran, T.V.
Deposit date:2000-07-20
Release date:2001-03-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Cu(I) and apo forms of the yeast metallochaperone, Atx1.
Biochemistry, 40, 2001
8W69
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BU of 8w69 by Molmil
DegQ-b-casein complex
Descriptor: Casein fragment, peptidase Do
Authors:Lee, I.-G, Jeon, H.
Deposit date:2023-08-28
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of E. coli Deg-b-casein complex
To Be Published
7B2T
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BU of 7b2t by Molmil
Crystal structure of Iripin-5 serpin from Ixodes ricinus
Descriptor: CHLORIDE ION, MAGNESIUM ION, Serpin-4 precursor, ...
Authors:Kascakova, B, Kuta Smatanova, I.
Deposit date:2020-11-27
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and biochemical characterization of the novel serpin Iripin-5 from Ixodes ricinus.
Acta Crystallogr D Struct Biol, 77, 2021
8WHN
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BU of 8whn by Molmil
Crystal Structure of the cytoplasmic domain of OST1 (Ribophorin I) from Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Descriptor: Ribophorin 1 superfamily protein
Authors:Robinson, R.C, Carilo, I.
Deposit date:2023-09-23
Release date:2024-09-25
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Intercompatibility of eukaryotic and Asgard archaea ribosome-translocon machineries.
J.Biol.Chem., 300, 2024
4YPE
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BU of 4ype by Molmil
ASH1L SET domain H2193F mutant in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-12
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
6T2P
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BU of 6t2p by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
4YNM
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BU of 4ynm by Molmil
ASH1L wild-type SET domain in complex with S-adenosyl methionine (SAM)
Descriptor: Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ZINC ION
Authors:Rogawski, D.S, Ndoj, J, Cho, H.-J, Maillard, I, Grembecka, J, Cierpicki, T.
Deposit date:2015-03-10
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
Biochemistry, 54, 2015
1RK0
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BU of 1rk0 by Molmil
Mhc Class I H-2Kb Heavy Chain Complexed With beta-2 Microglobulin and Herpes Simplex Virus Glycoprotein B peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, Glycoprotein B, ...
Authors:Miley, M.J, Messaoudi, I, Nikolich-Zugich, J, Fremont, D.H.
Deposit date:2003-11-20
Release date:2004-12-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Basis for the Restoration of TCR Recognition of an MHC Allelic Variant by Peptide Secondary Anchor Substitution
J.Exp.Med., 200, 2004
2DG2
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BU of 2dg2 by Molmil
Crystal Structure of Mouse Apolipoprotein A-I Binding Protein
Descriptor: Apolipoprotein A-I binding protein, CHLORIDE ION, SULFATE ION
Authors:Shumilin, I.A, Jha, K.N, Zheng, H, Chruszcz, M, Cymborowski, M, Herr, J.C, Minor, W.
Deposit date:2006-03-08
Release date:2007-03-27
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Biochemical and structural characterization of apolipoprotein A-I binding protein, a novel phosphoprotein with a potential role in sperm capacitation.
Endocrinology, 149, 2008
8F3C
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BU of 8f3c by Molmil
Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Descriptor: DNA (38-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G.
Deposit date:2022-11-09
Release date:2023-06-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023
5NKV
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BU of 5nkv by Molmil
Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 at pH 9.0 and 293 K.
Descriptor: CHLORIDE ION, Chlorite Dismutase, GLYCEROL, ...
Authors:Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2017-04-03
Release date:2018-01-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies.
ACS Catal, 7, 2017

225946

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