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PDB: 17801 件

3CF0
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Structure of D2 subdomain of P97/VCP in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Davies, J.M, Brunger, A.T, Weis, W.I.
登録日2008-03-01
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Improved Structures of Full-Length p97, an AAA ATPase: Implications for Mechanisms of Nucleotide-Dependent Conformational Change.
Structure, 16, 2008
5KLM
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Crystal structure of 2-hydroxymuconate-6-semialdehyde derived intermediate in NAD(+)-bound 2-aminomuconate 6-semialdehyde dehydrogenase N169D
分子名称: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-24
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
6WPX
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BU of 6wpx by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form
分子名称: BlEst2, IODIDE ION
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of BlEst2 from Bacillus licheniformis in its propeptide and mature forms reveal autoinhibitory effects of the C-terminal domain
Febs J., n/a, 2024
6X87
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BU of 6x87 by Molmil
CryoEM structure of the Plasmodium berghei circumsporozoite protein in complex with inhibitory mouse antibody 3D11.
分子名称: 3D11 Fab heavy chain, 3D11 Fab kappa chain, Circumsporozoite protein
著者Kucharska, I, Thai, E, Rubinstein, J, Julien, J.P.
登録日2020-06-01
公開日2020-12-02
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11.
Elife, 9, 2020
4C3I
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BU of 4c3i by Molmil
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, ...
著者Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
登録日2013-08-24
公開日2013-10-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
6QNO
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Rhodopsin-Gi protein complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab antibody fragment heavy chain, Fab antibody fragment light chain, ...
著者Tsai, C.-J, Marino, J, Adaixo, R.J, Pamula, F, Muehle, J, Maeda, S, Flock, T, Taylor, N.M.I, Mohammed, I, Matile, H, Dawson, R.J.P, Deupi, X, Stahlberg, H, Schertler, G.F.X.
登録日2019-02-11
公開日2019-07-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.38 Å)
主引用文献Cryo-EM structure of the rhodopsin-G alpha i-beta gamma complex reveals binding of the rhodopsin C-terminal tail to the G beta subunit.
Elife, 8, 2019
4TOI
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Crystal structure of E.coli ribosomal protein S2 in complex with N-terminal domain of S1
分子名称: 30S ribosomal protein S2,Ribosomal protein S1, ZINC ION
著者Grishkovskaya, I, Byrgazov, K, Moll, I, Djinovic-Carugo, K.
登録日2014-06-05
公開日2014-12-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the interaction of protein S1 with the Escherichia coli ribosome.
Nucleic Acids Res., 43, 2015
5KLN
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Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169A in complex with NAD+
分子名称: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-24
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.992 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLK
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BU of 5klk by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+ and 2-hydroxymuconate-6-semialdehyde
分子名称: (2E,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-24
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
2VBL
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BU of 2vbl by Molmil
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
分子名称: 5'-D(*DA*DA*DA*DA*DG*DG*DC*DA*DG*DAP)-3', 5'-D(*DA*DG*DG*DA*DT*DC*DC*DT*DA*DAP)-3', 5'-D(*DT*DC*DT*DG*DC*DC*DT*DT*DT*DT*DT*DT *DGP*DAP)-3', ...
著者Redondo, P, Prieto, J, Munoz, I.G, Alibes, A, Stricher, F, Serrano, L, Arnould, S, Perez, C, Cabaniols, J.P, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
登録日2007-09-14
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Basis of Xeroderma Pigmentosum Group C DNA Recognition by Engineered Meganucleases
Nature, 456, 2008
3DEO
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BU of 3deo by Molmil
Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43
分子名称: MAGNESIUM ION, Signal recognition particle 43 kDa protein
著者Stengel, K.F, Wild, K, Sinning, I.
登録日2008-06-10
公開日2008-08-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43.
Science, 321, 2008
2VBJ
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BU of 2vbj by Molmil
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
分子名称: 5'-D(*TP*CP*TP*GP*CP*CP*TP*TP*TP*TP *TP*TP*GP*AP*AP*GP*GP*AP*TP*CP*CP*TP*AP*A)-3', 5'-D(*TP*TP*AP*GP*GP*AP*TP*CP*CP*TP *TP*CP*AP*AP*AP*AP*AP*AP*GP*GP*CP*AP*GP*A)-3', CALCIUM ION, ...
著者Redondo, P, Prieto, J, Munoz, I.G, Alibes, A, Stricher, F, Serrano, L, Arnould, S, Perez, C, Cabaniols, J.P, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
登録日2007-09-14
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular Basis of Xeroderma Pigmentosum Group C DNA Recognition by Engineered Meganucleases
Nature, 456, 2008
4RZM
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BU of 4rzm by Molmil
Crystal structure of the Lsd19-lasalocid A complex
分子名称: CHLORIDE ION, Epoxide hydrolase LasB, FORMIC ACID, ...
著者Mathews, I.I, Hotta, K, Chen, X, Kim, C.-Y.
登録日2014-12-22
公開日2015-01-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis.
J.Am.Chem.Soc., 137, 2015
5M86
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BU of 5m86 by Molmil
Crystal Structure of the Thermoplasma acidophilum Protein Ta1207
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Pathare, G.R, Nagy, I, Bracher, A.
登録日2016-10-28
公開日2017-06-14
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the Thermoplasma acidophilum protein Ta1207.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5L8I
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BU of 5l8i by Molmil
crystal structure of human FABP6 apo-protein
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, DI(HYDROXYETHYL)ETHER, Gastrotropin, ...
著者Hendrick, A, Mueller, I, Leonard, P.M, Davenport, R, Mitchell, P.
登録日2016-06-08
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Identification and Investigation of Novel Binding Fragments in the Fatty Acid Binding Protein 6 (FABP6).
J.Med.Chem., 59, 2016
5MUV
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BU of 5muv by Molmil
Atomic structure fitted into a localized reconstruction of bacteriophage phi6 packaging hexamer P4
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Packaging enzyme P4
著者Sun, Z, El Omari, K, Sun, X, Ilca, S, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
登録日2017-01-14
公開日2017-03-22
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
7A01
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BU of 7a01 by Molmil
The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
分子名称: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES21, ...
著者Abaeva, I, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T.V, Hashem, Y, Hellen, C.U.T.
登録日2020-08-05
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism.
Cell Rep, 33, 2020
6HCV
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BU of 6hcv by Molmil
Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with a chromone ligand
分子名称: 6-fluoranyl-~{N}-[(1-oxidanylcyclohexyl)methyl]-4-oxidanylidene-chromene-2-carboxamide, Lysine--tRNA ligase
著者Robinson, D.A, Baragana, B, Norcross, N, Forte, B, Walpole, C, Gilbert, I.H.
登録日2018-08-16
公開日2019-04-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Lysyl-tRNA synthetase as a drug target in malaria and cryptosporidiosis.
Proc.Natl.Acad.Sci.USA, 116, 2019
5L8N
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crystal structure of human FABP6 protein with fragment 1
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 5,6-dimethyl-1~{H}-benzimidazol-2-amine, DI(HYDROXYETHYL)ETHER, ...
著者Hendrick, A, Mueller, I, Leonard, P.M, Davenport, R, Mitchell, P.
登録日2016-06-08
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Identification and Investigation of Novel Binding Fragments in the Fatty Acid Binding Protein 6 (FABP6).
J.Med.Chem., 59, 2016
3DEF
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BU of 3def by Molmil
Crystal structure of Toc33 from Arabidopsis thaliana, dimerization deficient mutant R130A
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, T7I23.11 protein
著者Koenig, P, Schleiff, E, Sinning, I, Tews, I.
登録日2008-06-10
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献On the significance of Toc-GTPase homodimers
J.Biol.Chem., 283, 2008
6XJ0
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BU of 6xj0 by Molmil
Crystal structure of multi-copper oxidase from Pediococcus pentosaceus
分子名称: CHLORIDE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Pardo, I, Soares, A.S, Collins, R, Partowmah, S.H, Coler, E.A.
登録日2020-06-22
公開日2021-03-10
最終更新日2021-05-12
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species.
Microb Biotechnol, 14, 2021
6GO2
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BU of 6go2 by Molmil
Carboxypeptidase T with N-sulfamoyl-L-Leucine
分子名称: CALCIUM ION, Carboxypeptidase T, SULFATE ION, ...
著者Timofeev, V.I, Akparov, V.K, Kuranova, I.P.
登録日2018-06-01
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Carboxypeptidase T with N-sulfamoyl-L-Leucine
To Be Published
2VBO
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BU of 2vbo by Molmil
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
分子名称: 5'-D(*TP*CP*TP*GP*CP*CP*TP*TP*TP*TP *TP*TP*GP*AP*AP*GP*GP*AP*TP*CP*CP*TP*AP*A)-3', 5'-D(*TP*TP*AP*GP*GP*AP*TP*CP*CP*TP *TP*CP*AP*AP*AP*AP*AP*AP*GP*GP*CP*AP*GP*A)-3', CALCIUM ION, ...
著者Redondo, P, Prieto, J, Munoz, I.G, Alibes, A, Stricher, F, Serrano, L, Arnould, S, Perez, C, Cabaniols, J.P, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
登録日2007-09-14
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Basis of Xeroderma Pigmentosum Group C DNA Recognition by Engineered Meganucleases
Nature, 456, 2008
5I3C
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BU of 5i3c by Molmil
Crystal structure of E.coli purine nucleoside phosphorylase with acycloguanosine
分子名称: 9-HYROXYETHOXYMETHYLGUANINE, Purine nucleoside phosphorylase DeoD-type, SULFATE ION
著者Timofeev, V.I, Abramchik, Y.A, Esipov, R.S, Kuranova, I.P.
登録日2016-02-10
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure of Escherichia coli purine nucleoside phosphorylase complexed with acyclovir.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6WH2
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Structure of the C-terminal BRCT domain of human XRCC1
分子名称: X-ray repair cross complementing protein 1 variant
著者Pourfarjam, Y, Ellenberger, T, Tainer, J.A, Tomkinson, A.E, Kim, I.K.
登録日2020-04-07
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.414 Å)
主引用文献An atypical BRCT-BRCT interaction with the XRCC1 scaffold protein compacts human DNA Ligase III alpha within a flexible DNA repair complex.
Nucleic Acids Res., 49, 2021

223532

件を2024-08-07に公開中

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