Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17822 件

3TPJ
DownloadVisualize
BU of 3tpj by Molmil
APO structure of BACE1
分子名称: Beta-secretase 1, CHLORIDE ION, SULFATE ION, ...
著者Xu, Y.C, Li, M.J, Greenblatt, H, Chen, T.T, Silman, I, Sussman, J.L.
登録日2011-09-08
公開日2011-11-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations
Acta Crystallogr.,Sect.D, 68, 2012
1ZLR
DownloadVisualize
BU of 1zlr by Molmil
Factor XI catalytic domain complexed with 2-guanidino-1-(4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl)ethyl nicotinate
分子名称: (1R)-2-{[AMINO(IMINO)METHYL]AMINO}-1-{4-[(4R)-4-(HYDROXYMETHYL)-1,3,2-DIOXABOROLAN-2-YL]PHENYL}ETHYL NICOTINATE, Coagulation factor XI, GLYCEROL, ...
著者Lazarova, T.I, Jin, L, Rynkiewicz, M, Gorga, J.C, Bibbins, F, Meyers, H.V, Babine, R, Strickler, J.
登録日2005-05-09
公開日2006-05-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synthesis and in vitro biological evaluation of aryl boronic acids as potential inhibitors of factor XIa.
Bioorg.Med.Chem.Lett., 16, 2006
1QKK
DownloadVisualize
BU of 1qkk by Molmil
Crystal structure of the receiver domain and linker region of DctD from Sinorhizobium meliloti
分子名称: C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN
著者Meyer, M.G, Park, S, Zeringue, L, Staley, M, Mckinstry, M, Kaufman, R.I, Zhang, H, Yan, D, Yennawar, N, Farber, G.K, Nixon, B.T.
登録日1999-07-23
公開日2000-07-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A dimeric two-component receiver domain inhibits the sigma54-dependent ATPase in DctD.
Faseb J., 15, 2001
3RSH
DownloadVisualize
BU of 3rsh by Molmil
Structure of 3-ketoacyl-(acyl-carrier-protein)reductase (FabG) from Vibrio cholerae O1 complexed with NADP+ (space group P62)
分子名称: 1,2-ETHANEDIOL, 3-oxoacyl-[acyl-carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Hou, J, Chruszcz, M, Cooper, D.R, Grabowski, M, Zheng, H, Osinski, T, Shumilin, I, Anderson, W, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-05-02
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
J.Bacteriol., 198, 2015
1ZE7
DownloadVisualize
BU of 1ze7 by Molmil
Zinc-binding domain of Alzheimer's disease amyloid beta-peptide in water solution at pH 6.5
分子名称: 16-mer from Alzheimer's disease amyloid Protein
著者Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
登録日2005-04-18
公開日2005-05-03
最終更新日2013-10-09
実験手法SOLUTION NMR
主引用文献Structural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging.
J.Biol.Chem., 281, 2006
7JI0
DownloadVisualize
BU of 7ji0 by Molmil
CryoEM structure of Streptococcus thermophilus SHP pheromone receptor Rgg3 in complex with SHP3
分子名称: Positive transcriptional regulator MutR family, SHP3
著者Petrou, V.I, Capodagli, G.C, Kaelber, J.T, Neiditch, M.B.
登録日2020-07-21
公開日2020-10-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
Proc.Natl.Acad.Sci.USA, 117, 2020
1P2D
DownloadVisualize
BU of 1p2d by Molmil
Crystal Structure of Glycogen Phosphorylase B in complex with Beta Cyclodextrin
分子名称: Glycogen phosphorylase, muscle form, PYRIDOXAL-5'-PHOSPHATE, ...
著者Pinotsis, N, Leonidas, D.D, Chrysina, E.D, Oikonomakos, N.G, Mavridis, I.M.
登録日2003-04-15
公開日2003-09-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The binding of beta- and gamma-cyclodextrins to glycogen phosphorylase b: Kinetic and crystallographic studies.
Protein Sci., 12, 2003
7JKV
DownloadVisualize
BU of 7jkv by Molmil
Crystal Structure of SARS-CoV-2 main protease in complex with an inhibitor GRL-2420
分子名称: 3C-like proteinase, N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, PENTAETHYLENE GLYCOL
著者Bulut, H, Hattori, S.I, Das, D, Murayama, K, Mitsuya, H.
登録日2020-07-29
公開日2020-09-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献A small molecule compound with an indole moiety inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 12, 2021
3KXX
DownloadVisualize
BU of 3kxx by Molmil
Structure of the mutant Fibroblast Growth Factor receptor 1
分子名称: Basic fibroblast growth factor receptor 1
著者Bae, J.H, Boggon, T.J, Tome, F, Mandiyan, V, Lax, I, Schlessinger, J.
登録日2009-12-04
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Asymmetric receptor contact is required for tyrosine autophosphorylation of fibroblast growth factor receptor in living cells.
Proc.Natl.Acad.Sci.USA, 107, 2010
7GSP
DownloadVisualize
BU of 7gsp by Molmil
RIBONUCLEASE T1/2',3'-CGPS, NON-PRODUCTIVE
分子名称: GUANOSINE-2',3'-CYCLOPHOSPHOROTHIOATE, PHOSPHATE ION, RIBONUCLEASE T1
著者Zegers, I, Wyns, L.
登録日1997-12-10
公開日1998-03-18
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography.
Nat.Struct.Biol., 5, 1998
1Z1X
DownloadVisualize
BU of 1z1x by Molmil
Crystal Structure of a novel disintegrin from Saw-scaled viper at 3.2 A resolution
分子名称: disintegrin
著者Hassan, M.I, Ethayathulla, A.S, Bilgrami, S, Singh, B, Yadav, S, Singh, T.P.
登録日2005-03-07
公開日2005-04-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of a novel disintegrin from Saw-scaled viper at 3.2A resolution
To be published
7JFQ
DownloadVisualize
BU of 7jfq by Molmil
The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase, FORMIC ACID
著者Tan, K, Maltseva, N.I, Welk, L.F, Jedrzejczak, R.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-17
公開日2020-07-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
To Be Published
2A36
DownloadVisualize
BU of 2a36 by Molmil
Solution structure of the N-terminal SH3 domain of DRK
分子名称: Protein E(sev)2B
著者Forman-Kay, J.D, Bezsonova, I, Singer, A, Choy, W.-Y, Tollinger, M.
登録日2005-06-23
公開日2005-12-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
3L32
DownloadVisualize
BU of 3l32 by Molmil
Structure of the dimerisation domain of the rabies virus phosphoprotein
分子名称: Phosphoprotein
著者Ivanov, I, Crepin, T, Jamin, M, Ruigrok, R.W.H.
登録日2009-12-16
公開日2010-02-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the dimerisation domain of the rabies virus phosphoprotein
J.Virol., 2010
2A8H
DownloadVisualize
BU of 2a8h by Molmil
Crystal structure of catalytic domain of TACE with Thiomorpholine Sulfonamide Hydroxamate inhibitor
分子名称: 4-({4-[(4-AMINOBUT-2-YNYL)OXY]PHENYL}SULFONYL)-N-HYDROXY-2,2-DIMETHYLTHIOMORPHOLINE-3-CARBOXAMIDE, ADAM 17, ZINC ION
著者Levin, J.I, Chen, J.M, Laakso, L.M, Du, M, Schmid, J, Xu, W, Cummons, T, Xu, J, Jin, G, Barone, D, Skotnicki, J.S.
登録日2005-07-08
公開日2006-02-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acetylenic TACE inhibitors. Part 3: Thiomorpholine sulfonamide hydroxamates.
Bioorg.Med.Chem.Lett., 16, 2006
7JGX
DownloadVisualize
BU of 7jgx by Molmil
Solution NMR structure of neuroVAL, a derived peptide from wasp
分子名称: neuroVAL derived peptide ILE-PHE-TRP-LEU-PHE-ARG-GLY-LYS-ALA-ASP-VAL-ALA-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
2A0P
DownloadVisualize
BU of 2a0p by Molmil
Crystal structure of RNA oligomer containing 4'-thioribose
分子名称: 5'-R(*CP*CP*(S4C)P*CP*GP*GP*GP*G)-3'
著者Haeberli, P, Berger, I, Pallan, P.S, Egli, M.
登録日2005-06-16
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Syntheses of 4'-thioribonucleosides and thermodynamic stability and crystal structure of RNA oligomers with incorporated 4'-thiocytosine
Nucleic Acids Res., 33, 2005
2A37
DownloadVisualize
BU of 2a37 by Molmil
Solution structure of the T22G mutant of N-terminal SH3 domain of DRK (DRKN SH3 DOMAIN)
分子名称: Protein E(sev)2B
著者Bezsonova, I, Singer, A, Choy, W.-Y, Tollinger, M, Forman-Kay, J.D.
登録日2005-06-23
公開日2005-12-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
4NYX
DownloadVisualize
BU of 4nyx by Molmil
Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
分子名称: (3R)-N-[3-(7-methoxy-3,4-dihydroquinolin-1(2H)-yl)propyl]-3-methyl-2-oxo-1,2,3,4-tetrahydroquinoxaline-5-carboxamide, CREB-binding protein
著者Filippakopoulos, P, Picaud, S, Felletar, I, Rooney, T.P.C, Fedorov, O, Martin, S, Monteiro, O.P, Conway, S.J, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2013-12-11
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
TO BE PUBLISHED
7JHF
DownloadVisualize
BU of 7jhf by Molmil
Solution NMR structure of protonectin-F, a derived peptide from wasp
分子名称: Protonectin-F derived peptide ILE-PHE-GLY-THR-ILE-LEU-GLY-PHE-LEU-LYS-GLY-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
7JGY
DownloadVisualize
BU of 7jgy by Molmil
Solution NMR structure of protonectin, a peptide from wasp
分子名称: Protonectin peptide ILE-LEU-GLY-THR-ILE-LEU-GLY-LEU-LEU-LYS-GLY-LEU-NH2
著者Muller, J.A.I, Craik, D.J, Koehbach, J.
登録日2020-07-20
公開日2020-12-16
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.
Chembiochem, 22, 2021
1Z3J
DownloadVisualize
BU of 1z3j by Molmil
Solution Structure of MMP12 in the presence of N-isobutyl-N-4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
分子名称: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
著者Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.M, Luchinat, C, Mangani, S, Terni, B, Turano, P.
登録日2005-03-13
公開日2005-04-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Conformational variability of matrix metalloproteinases: Beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Z0C
DownloadVisualize
BU of 1z0c by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain D508A mutant
分子名称: Putative protease La homolog type
著者Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
登録日2005-03-01
公開日2005-08-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
3UB1
DownloadVisualize
BU of 3ub1 by Molmil
Ntf2 like protein involved in plasmid conjugation
分子名称: DI(HYDROXYETHYL)ETHER, ORF13-like protein
著者Porter, C.J, Rosado, C.J, Bantwal, R, Bannam, T.L, Rood, J.I, Whisstock, J.C.
登録日2011-10-22
公開日2012-02-08
最終更新日2012-02-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The conjugation protein TcpC from Clostridium perfringens is structurally related to the type IV secretion system protein VirB8 from Gram-negative bacteria.
Mol.Microbiol., 83, 2012
1QZ5
DownloadVisualize
BU of 1qz5 by Molmil
Structure of rabbit actin in complex with kabiramide C
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Klenchin, V.A, Allingham, J.S, King, R, Tanaka, J, Marriott, G, Rayment, I.
登録日2003-09-15
公開日2003-11-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Trisoxazole macrolide toxins mimic the binding of actin-capping proteins to actin
Nat.Struct.Biol., 10, 2003

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon