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PDB: 17892 件

1KA9
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Imidazole Glycerol Phosphate Synthase
分子名称: imidazole glycerol phosphate synthase
著者Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-01
公開日2002-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1K3G
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NMR Solution Structure of Oxidized Cytochrome c-553 from Bacillus pasteurii
分子名称: HEME C, cytochrome c-553
著者Banci, L, Bertini, I, Ciurli, S, Dikiy, A, Dittmer, J, Rosato, A, Sciara, G, Thompsett, A.R.
登録日2001-10-03
公開日2001-10-31
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria.
Chembiochem, 3, 2002
1K6G
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Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA Processing
分子名称: RNA (5'-R(P*GP*GP*CP*GP*UP*CP*AP*UP*GP*AP*GP*UP*CP*CP*AP*UP*GP*GP*CP*GP*CP*C)-3')
著者Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
登録日2001-10-16
公開日2001-12-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1K3R
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Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum
分子名称: conserved protein MT0001
著者Zarembinski, T.I, Kim, Y, Peterson, K, Christendat, D, Dharamsi, A, Arrowsmith, C.H, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2001-10-03
公開日2002-05-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Deep trefoil knot implicated in RNA binding found in an archaebacterial protein.
Proteins, 50, 2003
1K40
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crystal structure of the FAT domain of focal adhesion kinase
分子名称: adhesion kinase
著者Hayashi, I, Vuori, K, Liddington, R.C.
登録日2001-10-04
公開日2002-02-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The focal adhesion targeting (FAT) region of focal adhesion kinase is a four-helix bundle that binds paxillin
Nat.Struct.Biol., 9, 2002
2IYI
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structure of a light-induced intermediate of the BLUF domain of the rhodobacterial protein AppA
分子名称: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, APPA, ...
著者Jung, A, Reinstein, J, Domratcheva, T, Shoeman, R.-L, Schlichting, I.
登録日2006-07-17
公開日2006-09-06
最終更新日2018-03-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structures of the AppA BLUF domain photoreceptor provide insights into blue light-mediated signal transduction.
J. Mol. Biol., 362, 2006
1K8Y
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CRYSTAL STRUCTURE OF THE TRYPTOPHAN SYNTHASE BETA-SER178PRO MUTANT COMPLEXED WITH D,L-ALPHA-GLYCEROL-3-PHOSPHATE
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
著者Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
登録日2001-10-26
公開日2002-06-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the beta Ser178--> Pro mutant of tryptophan synthase. A "knock-out" allosteric enzyme.
J.Biol.Chem., 277, 2002
1YIL
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Structure of Hen egg white lysozyme soaked with Cu2-Xylylbicyclam
分子名称: 1,1'-[1,4-PHENYLENEBIS(METHYLENE)]BIS[1,4,8,11-TETRAAZA-CYCLOTETRADECANE]CU(II)2, CHLORIDE ION, Lysozyme C, ...
著者Hunter, T.M, McNae, I.W, Liang, X, Bella, J, Parsons, S, Walkinshaw, M.D, Sadler, P.J.
登録日2005-01-12
公開日2005-02-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein recognition of macrocycles: binding of anti-HIV metallocyclams to lysozyme
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Y7Y
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High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila
分子名称: C.AhdI
著者McGeehan, J.E, Streeter, S.D, Papapanagiotou, I, Fox, G.C, Kneale, G.G.
登録日2004-12-10
公開日2005-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila.
J.Mol.Biol., 346, 2005
2IKU
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Crystal Structure of Human Renin Complexed with Inhibitors
分子名称: 6-ETHYL-5-[(2S)-1-(3-METHOXYPROPYL)-2-PHENYL-1,2,3,4-TETRAHYDROQUINOLIN-7-YL]PYRIMIDINE-2,4-DIAMINE, Renin
著者Mochalkin, I.
登録日2006-10-02
公開日2006-12-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Binding thermodynamics of substituted diaminopyrimidine renin inhibitors.
Anal.Biochem., 360, 2007
7SWO
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C98C7 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction)
分子名称: C98C7 Fab heavy chain, C98C7 Fab light chain, Spike protein S1
著者Windsor, I.W, Tong, P, Wesemann, D.R, Harrison, S.C.
登録日2021-11-20
公開日2022-04-27
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Antibodies induced by an ancestral SARS-CoV-2 strain that cross-neutralize variants from Alpha to Omicron BA.1.
Sci Immunol, 7, 2022
7SWP
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G32Q4 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction)
分子名称: G32Q4 Fab heavy chain, G32Q4 Fab light chain, Spike protein S1
著者Windsor, I.W, Tong, P, Wesemann, D.R, Harrison, S.C.
登録日2021-11-20
公開日2022-04-27
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Antibodies induced by an ancestral SARS-CoV-2 strain that cross-neutralize variants from Alpha to Omicron BA.1.
Sci Immunol, 7, 2022
2IJQ
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Crystal structure of protein rrnAC1037 from Haloarcula marismortui, Pfam DUF309
分子名称: Hypothetical protein
著者Malashkevich, V.N, Toro, R, Sauder, J.M, Schwinn, K.D, Thompson, D.A, Rutter, M.E, Dickey, M, Groshong, C, Bain, K.T, Adams, J.M, Reyes, C, Rooney, I, Powell, A, Boice, A, Gheyi, T, Ozyurt, S, Atwell, S, Wasserman, S.R, Emtage, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-09-30
公開日2006-10-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structure of the hypothetical Protein from Haloarcula marismortui
To be Published
7SWN
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G32A4 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction)
分子名称: G32A4 Fab heavy chain, G32A4 Fab light chain, Spike protein S1
著者Windsor, I.W, Tong, P, Wesemann, D.R, Harrison, S.C.
登録日2021-11-20
公開日2022-04-27
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Antibodies induced by an ancestral SARS-CoV-2 strain that cross-neutralize variants from Alpha to Omicron BA.1.
Sci Immunol, 7, 2022
1YBX
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Conserved hypothetical protein Cth-383 from Clostridium thermocellum
分子名称: Conserved hypothetical protein, UNKNOWN ATOM OR ION
著者Tempel, W, Chang, J, Zhao, M, Habel, J, Kataeva, I, Xu, H, Chen, L, Lee, D, Nguyen, J, Chang, S.-H, Horanyi, P, Florence, Q, Zhou, W, Lin, D, Zhang, H, Ljundahl, L, Liu, Z.-J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-12-21
公開日2005-02-01
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conserved hypothetical protein Cth-383 from Clostridium thermocellum
To be published
8YRU
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Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis (apo form) after 15 sec of soaking with phenylhydrazine
分子名称: ACETATE ION, Aminotransferase class IV, [6-methyl-5-oxidanyl-4-[(2-phenylhydrazinyl)methyl]pyridin-3-yl]methyl dihydrogen phosphate
著者Matyuta, I.O, Bakunova, A.K, Minyaev, M.E, Popov, V.O, Boyko, K.M.
登録日2024-03-21
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis (apo form) after 15 sec of soaking with phenylhydrazine
To Be Published
1YC9
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The crystal structure of the outer membrane protein VceC from the bacterial pathogen Vibrio cholerae at 1.8 resolution
分子名称: MERCURY (II) ION, multidrug resistance protein, octyl beta-D-glucopyranoside
著者Federici, L, Du, D, Walas, F, Matsumura, H, Fernandez-Recio, J, McKeegan, K.S, Borges-Walmsley, M.I, Luisi, B.F, Walmsley, A.R.
登録日2004-12-22
公開日2005-03-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of the outer membrane protein VCEC from the bacterial pathogen vibrio cholerae at 1.8 A resolution
J.Biol.Chem., 280, 2005
8YRT
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Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis in the holo form obtained at pH 7.0
分子名称: Aminotransferase class IV, PYRIDOXAL-5'-PHOSPHATE
著者Matyuta, I.O, Bakunova, A.K, Minyaev, M.E, Popov, V.O, Boyko, K.M.
登録日2024-03-21
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis in the holo form obtained at pH 7.0
To Be Published
8YJX
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Crystal structure of penicillin-binding protein 2 (PBP2) from Campylobacter jejuni
分子名称: Penicillin-binding protein 2, ZINC ION
著者Choi, H.J, Ki, D.W, Yoon, S.I.
登録日2024-03-03
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural and biochemical analysis of penicillin-binding protein 2 from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 710, 2024
1KFC
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CRYSTAL STRUCTURE OF ALPHAT183V MUTANT OF TRYPTOPHAN SYNTHASE FROM SALMONELLA TYPHIMURIUM With Indole Propanol Phosphate
分子名称: INDOLE-3-PROPANOL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
著者Kulik, V, Weyand, M, Siedel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I.
登録日2001-11-20
公開日2003-01-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献On the Role of AlphaTHR183 in the Allosteric Regulation and Catalytic Mechanism of Tryptophan Synthase
J.Mol.Biol., 324, 2002
8YRV
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Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis complexed with 3-aminooxypropionic acid
分子名称: 3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxypropanoic acid, Aminotransferase class IV, MAGNESIUM ION
著者Matyuta, I.O, Bakunova, A.K, Nikolaeva, A.Y, Popov, V.O, Boyko, K.M.
登録日2024-03-21
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis complexed with 3-aminooxypropionic acid
To Be Published
1KFE
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CRYSTAL STRUCTURE OF ALPHAT183V MUTANT OF TRYPTOPHAN SYNTHASE FROM SALMONELLA TYPHIMURIUM WITH L-Ser Bound To The Beta Site
分子名称: SODIUM ION, TRYPTOPHAN SYNTHASE ALPHA CHAIN, TRYPTOPHAN SYNTHASE BETA CHAIN, ...
著者Kulik, V, Weyand, M, Siedel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I.
登録日2001-11-20
公開日2003-01-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献On the Role of AlphaTHR183 in the Allosteric Regulation and Catalytic Mechanism of Tryptophan Synthase
J.Mol.Biol., 324, 2002
1KKS
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Structure of the histone mRNA hairpin required for cell cycle regulation of histone gene expression
分子名称: 5'-R(*GP*GP*AP*AP*GP*GP*CP*CP*CP*UP*UP*UP*UP*CP*AP*GP*GP*GP*CP*CP*AP*CP*CP*C)-3'
著者Zanier, K, Luyten, I, Crombie, C, Muller, B, Schuemperli, D, Linge, J.P, Nilges, M, Sattler, M.
登録日2001-12-10
公開日2002-03-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the histone mRNA hairpin required for cell cycle regulation of histone gene expression.
RNA, 8, 2002
8YTS
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The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution
分子名称: Cytochrome C, HEME C
著者Varfolomeeva, L.A, Solovieva, A.Y, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O.
登録日2024-03-26
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution
To Be Published
1Y6J
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L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135
分子名称: L-lactate dehydrogenase
著者Chen, L, Yang, H, Kataeva, I, Chen, L.R, Tempel, W, Lee, D, Habel, J, Zhou, W, Lin, D, Ljungdahl, L, Liu, Z.-J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-12-06
公開日2004-12-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135
To be Published

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件を2024-09-11に公開中

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