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PDB: 17892 件

2F95
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M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
3R5L
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BU of 3r5l by Molmil
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Deazaflavin-dependent nitroreductase
著者Cellitti, S.E, Shaffer, J, Jones, D.H, Mukherjee, T, Gurumurthy, M, Bursulaya, B, Boshoff, H.I.M, Choi, I, Nayyar, A, Lee, Y.S, Cherian, J, Niyomrattanakit, P, Dick, T, Manjunatha, U.H, Barry, C.E, Spraggon, G, Geierstanger, B.H.
登録日2011-03-18
公開日2012-01-18
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Structure, 20, 2012
8S0N
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BU of 8s0n by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
分子名称: Transmembrane protease serine 2, nanobody A07
著者Duquerroy, S, Fernandez, I, Rey, F.
登録日2024-02-14
公開日2024-06-26
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of TMPRSS2 zymogen activation and recognition by the HKU1 seasonal coronavirus.
Cell, 187, 2024
135D
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BU of 135d by Molmil
SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES
分子名称: DNA TRIPLEX
著者Radhakrishnan, I, Patel, D.J.
登録日1993-08-30
公開日1994-04-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples.
Structure, 1, 1993
8SFN
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BU of 8sfn by Molmil
WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (30-MER), DNA (31-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
To Be Published
8SFI
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BU of 8sfi by Molmil
WT CRISPR-Cas12a with a 8bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a with a 8bp R-loop
To Be Published
3RO7
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BU of 3ro7 by Molmil
Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Thymine.
分子名称: Apolipoprotein A-I-binding protein, SULFATE ION, THYMINE
著者Shumilin, I.A, Jha, K.N, Cymborowski, M, Herr, J.C, Minor, W.
登録日2011-04-25
公開日2012-07-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
5HCQ
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BU of 5hcq by Molmil
Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
登録日2016-01-04
公開日2016-04-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
4MHI
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BU of 4mhi by Molmil
Crystal structure of a H5N1 influenza virus hemagglutinin from A/goose/Guangdong/1/96
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Zhu, X, Wilson, I.A.
登録日2013-08-29
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献A Unique and Conserved Neutralization Epitope in H5N1 Influenza Viruses Identified by an Antibody against the A/Goose/Guangdong/1/96 Hemagglutinin.
J.Virol., 87, 2013
8SFQ
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BU of 8sfq by Molmil
WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
To Be Published
4KAS
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BU of 4kas by Molmil
Crystal structure of FDTS from T. maritima mutant (H53D) with FAD and dUMP
分子名称: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mathews, I.I.
登録日2013-04-22
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Flavin-Dependent Thymidylate Synthase as a Drug Target for Deadly Microbes: Mutational Study and a Strategy for Inhibitor Design.
J Bioterror Biodef, Suppl 12, 2013
8SFO
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BU of 8sfo by Molmil
WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (35-MER), DNA (40-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
To Be Published
1AMQ
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BU of 1amq by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAMINE 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN THREE FORMS
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
著者Miyahara, I, Hirotsu, K, Hayashi, H, Kagamiyama, H.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms.
J.Biochem.(Tokyo), 116, 1994
3GG6
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BU of 3gg6 by Molmil
Crystal structure of the NUDIX domain of human NUDT18
分子名称: Nucleoside diphosphate-linked moiety X motif 18
著者Tresaugues, L, Siponen, M.I, Lehtio, L, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Nordlund, P, Structural Genomics Consortium (SGC)
登録日2009-02-27
公開日2009-03-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the NUDIX domain of human NUDT18
To be Published
1AO2
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BU of 1ao2 by Molmil
cobalt(III)-deglycopepleomycin determined by NMR studies
分子名称: AGLYCON OF PEPLOMYCIN, COBALT (III) ION, HYDROGEN PEROXIDE
著者Caceres-Cortes, J, Sugiyama, H, Ikudome, K, Saito, I, Wang, A.H.-J.
登録日1997-07-16
公開日1999-07-30
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Structures of cobalt(III)-pepleomycin and cobalt(III)-deglycopepleomycin (green forms) determined by NMR studies.
Eur.J.Biochem., 244, 1997
8SFR
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BU of 8sfr by Molmil
WT CRISPR-Cas12a post nontarget strand cleavage.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a post nontarget strand cleavage.
To Be Published
2F80
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BU of 2f80 by Molmil
HIV-1 Protease mutant D30N complexed with inhibitor TMC114
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, POL POLYPROTEIN, ...
著者Kovalevsky, A.Y, Weber, I.T.
登録日2005-12-01
公開日2006-03-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Effectiveness of Nonpeptide Clinical Inhibitor TMC-114 on HIV-1 Protease with Highly Drug Resistant Mutations D30N, I50V, and L90M.
J.Med.Chem., 49, 2006
2F93
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BU of 2f93 by Molmil
K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
8SFJ
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BU of 8sfj by Molmil
WT CRISPR-Cas12a with a 10bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*AP*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献WT CRISPR-Cas12a with a 10bp R-loop
To Be Published
8SFH
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BU of 8sfh by Molmil
WT CRISPR-Cas12a with a 5bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (32-MER), RNA (27-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献WT CRISPR-Cas12a with a 5bp R-loop
To Be Published
1AI1
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BU of 1ai1 by Molmil
HIV-1 V3 LOOP MIMIC
分子名称: AIB142, IGG1-KAPPA 59.1 FAB (HEAVY CHAIN), IGG1-KAPPA 59.1 FAB (LIGHT CHAIN)
著者Ghiara, J.B, Wilson, I.A.
登録日1996-11-06
公開日1997-05-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-based design of a constrained peptide mimic of the HIV-1 V3 loop neutralization site.
J.Mol.Biol., 266, 1997
8SFL
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BU of 8sfl by Molmil
WT CRISPR-Cas12a with a 15bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (40-MER), RNA (34-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 15bp R-loop
To Be Published
1A6G
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BU of 1a6g by Molmil
CARBONMONOXY-MYOGLOBIN, ATOMIC RESOLUTION
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Vojtechovsky, J, Chu, K, Berendzen, J, Sweet, R.M, Schlichting, I.
登録日1998-02-25
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structures of myoglobin-ligand complexes at near-atomic resolution.
Biophys.J., 77, 1999
8SFP
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BU of 8sfp by Molmil
WT CRISPR-Cas12a with the target strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (40-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献WT CRISPR-Cas12a with the target strand in the RuvC active site.
To Be Published
2RQG
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BU of 2rqg by Molmil
Structure of GSPT1/ERF3A-PABC
分子名称: G1 to S phase transition 1, Polyadenylate-binding protein 1
著者Osawa, M, Nakanishi, T, Hosoda, N, Uchida, S, Hoshino, T, Katada, I, Shimada, I.
登録日2009-05-08
公開日2010-05-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Eukaryotic Translation Termination Factor Gspt/Erf3 Recognizes Pabp with Chemical Exchange Using Two Overlapping Motifs
To be Published

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