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PDB: 17892 results

2C1G
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BU of 2c1g by Molmil
Structure of Streptococcus pneumoniae peptidoglycan deacetylase (SpPgdA)
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, PEPTIDOGLYCAN GLCNAC DEACETYLASE, ...
Authors:Blair, D.E, Schuttelkopf, A.W, MacRae, J.I, van Aalten, D.M.F.
Deposit date:2005-09-14
Release date:2005-09-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and metal-dependent mechanism of peptidoglycan deacetylase, a streptococcal virulence factor.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
6EQT
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BU of 6eqt by Molmil
CRYSTAL STRUCTURE OF THE HUMAN KINETOCHORE PROTEIN CENP-N
Descriptor: Centromere protein N
Authors:Pentakota, S, Vetter, I.R, Petrovic, A, Musacchio, A.
Deposit date:2017-10-15
Release date:2018-01-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.735 Å)
Cite:Decoding the centromeric nucleosome through CENP-N.
Elife, 6, 2017
7KYU
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BU of 7kyu by Molmil
The crystal structure of SARS-CoV-2 Main Protease with the formation of Cys145-1H-indole-5-carboxylate
Descriptor: 1,2-ETHANEDIOL, 1-[(1H-indole-5-carbonyl)oxy]-1H-benzotriazole, 3C-like proteinase
Authors:Tan, K, Maltseva, N.I, Jedrzejczak, R.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-12-08
Release date:2020-12-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The crystal structure of SARS-CoV-2 Main Protease with the formation of Cys145-1H-indole-5-carboxylate
To Be Published
6KB8
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BU of 6kb8 by Molmil
X-ray structure of human PPARalpha ligand binding domain-GW7647 co-crystals obtained by cross-seeding
Descriptor: 2-[(4-{2-[(4-cyclohexylbutyl)(cyclohexylcarbamoyl)amino]ethyl}phenyl)sulfanyl]-2-methylpropanoic acid, GLYCEROL, Peroxisome proliferator-activated receptor alpha
Authors:Kamata, S, Suda, K, Saito, K, Oyama, T, Ishii, I.
Deposit date:2019-06-24
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates.
Iscience, 23, 2020
3DRY
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BU of 3dry by Molmil
X-ray crystal structure of human KCTD5 protein crystallized in low-salt buffer
Descriptor: BTB/POZ domain-containing protein KCTD5
Authors:Tereshko, V, Dementieva, I, Goldstein, S.A.N.
Deposit date:2008-07-11
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Pentameric assembly of potassium channel tetramerization domain-containing protein 5.
J.Mol.Biol., 387, 2009
3RKV
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BU of 3rkv by Molmil
C-terminal domain of protein C56C10.10, a putative peptidylprolyl isomerase, from Caenorhabditis elegans
Descriptor: putative peptidylprolyl isomerase
Authors:Osipiuk, J, Tesar, C, Gu, M, Van Oosten-Hawle, P, Morimoto, R.I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-18
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:C-terminal domain of protein C56C10.10, a putative peptidylprolyl isomerase, from Caenorhabditis elegans
To be Published
6TJE
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BU of 6tje by Molmil
Crystal structure of the computationally designed Cake5 protein
Descriptor: Cake5
Authors:Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
1MW0
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BU of 1mw0 by Molmil
Amylosucrase mutant E328Q co-crystallized with maltoheptaose then soaked with maltoheptaose.
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, amylosucrase, ...
Authors:Skov, L.K, Mirza, O, Sprogoe, D, Dar, I, Remaud-Simeon, M, Albenne, C, Monsan, P, Gajhede, M.
Deposit date:2002-09-27
Release date:2002-12-18
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Oligosaccharide and Sucrose Complexes of Amylosucrase. STRUCTURAL IMPLICATIONS FOR THE POLYMERASE ACTIVITY
J.BIOL.CHEM., 277, 2002
7L63
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BU of 7l63 by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with L-fucose-(alpha 1-2)-D-galactose-(beta1-4)-D-glucose
Descriptor: CALCIUM ION, Macrophage mannose receptor 1, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-12-23
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
6G7G
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BU of 6g7g by Molmil
Structure of SPH (Self-Incompatibility Protein Homologue) proteins, a widespread family of small, highly stable, secreted proteins from plants
Descriptor: S-protein homolog 15
Authors:Rajasekar, K.V, Coulthard, R.J, Ride, J.P, Ji, S, Winn, P.J, Wheeler, M.P, Hyde, E.I, Smith, L.J.
Deposit date:2018-04-06
Release date:2019-03-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of SPH (self-incompatibility protein homologue) proteins: a widespread family of small, highly stable, secreted proteins.
Biochem.J., 476, 2019
6TE4
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BU of 6te4 by Molmil
Structural insights into Pseudomonas aeruginosa Type six secretion system exported effector 8: Tse8 in complex with a peptide
Descriptor: Pro-Pro-Leu-Ala-Ser-Lys, Tse8
Authors:Sainz-Polo, M.A, Capuni, R, Lucas, M, Altuna, J, Fucini, P, Montanchez, I, Albesa-Jove, D.
Deposit date:2019-11-11
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural insights into Pseudomonas aeruginosaType six secretion system exported effector 8.
J.Struct.Biol., 212, 2020
3R2X
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BU of 3r2x by Molmil
Crystal structure of the de novo designed binding protein HB36.3 in complex the the 1918 influenza virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HB36.3, designed hemagglutinin binding protein, ...
Authors:Ekiert, D.C, Wilson, I.A.
Deposit date:2011-03-14
Release date:2011-05-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Computational design of proteins targeting the conserved stem region of influenza hemagglutinin.
Science, 332, 2011
1N1N
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BU of 1n1n by Molmil
Structure of Mispairing of the Deoxycytosine with Deoxyadenosine 5' to the 8,9-Dihydro-8-(N7-guanyl)-9-Hydroxy-Aflatoxin B1 Adduct
Descriptor: 5'-D(*AP*CP*AP*TP*CP*GP*AP*TP*CP*T)-3', 5'-D(*AP*GP*AP*TP*CP*AP*AP*TP*GP*T)-3', 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
Authors:Stone, M.P, Giri, I.
Deposit date:2002-10-18
Release date:2003-10-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Wobble dC.dA pairing 5' to the cationic guanine N7 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 adduct: implications for nontargeted AFB1 mutagenesis.
Biochemistry, 42, 2003
6GF0
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BU of 6gf0 by Molmil
Lysozyme structure determined from SFX data using a Sheet-on-Sheet chipless chip
Descriptor: Lysozyme C
Authors:Doak, R.B, Gorel, A, Foucar, L, Gruenbein, M.L, Hilpert, M, Kloos, M, Nass Kovacs, G, Roome, C, Shoeman, R.L, Stricker, M, Tono, K, You, D, Ueda, K, Sherrel, D, Owen, R, Barends, T.R.M, Schlichting, I.
Deposit date:2018-04-27
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystallography on a chip - without the chip: sheet-on-sheet sandwich.
Acta Crystallogr D Struct Biol, 74, 2018
4ZET
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BU of 4zet by Molmil
Blood dendritic cell antigen 2 (BDCA-2) complexed with GalGlcNAcMan
Descriptor: C-type lectin domain family 4 member C, CALCIUM ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose
Authors:Jegouzo, S.A.F, Feinberg, H, Dungarwalla, T, Drickamer, K, Weis, W.I, Taylor, M.E.
Deposit date:2015-04-20
Release date:2015-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Novel Mechanism for Binding of Galactose-terminated Glycans by the C-type Carbohydrate Recognition Domain in Blood Dendritic Cell Antigen 2.
J.Biol.Chem., 290, 2015
1N6T
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BU of 1n6t by Molmil
Solution Structure of the Tachykinin Peptide Neurokinin A
Descriptor: Neurokinin A
Authors:Chandrashekar, I.R, Cowsik, S.M.
Deposit date:2002-11-12
Release date:2003-12-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the mammalian tachykinin peptide neurokinin A bound to lipid micelles.
Biophys.J., 85, 2003
1YT6
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BU of 1yt6 by Molmil
NMR structure of peptide SD
Descriptor: peptide SD
Authors:Murata, T, Hemmi, H, Nakamura, S, Shimizu, K, Suzuki, Y, Yamaguchi, I.
Deposit date:2005-02-10
Release date:2005-09-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure, epitope mapping, and docking simulation of a gibberellin mimic peptide as a peptidyl mimotope for a hydrophobic ligand.
Febs J., 272, 2005
3DRX
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BU of 3drx by Molmil
X-ray crystal structure of human KCTD5 protein crystallized in high-salt buffer
Descriptor: BTB/POZ domain-containing protein KCTD5
Authors:Tereshko, V, Dementieva, I, Goldstein, S.A.N.
Deposit date:2008-07-11
Release date:2009-02-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Pentameric assembly of potassium channel tetramerization domain-containing protein 5.
J.Mol.Biol., 387, 2009
1N7K
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BU of 1n7k by Molmil
Unique tetrameric structure of deoxyribose phosphate aldolase from Aeropyrum pernix
Descriptor: deoxyribose-phosphate aldolase
Authors:Tsuge, H, Sakuraba, H, Shimoya, I, Katunuma, N, Ago, H, Miyano, M, Ohshima, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-11-15
Release date:2003-03-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The First Crystal Structure of Archaeal Aldolase. UNIQUE TETRAMERIC STRUCTURE of 2-DEOXY-D-RIBOSE-5-PHOSPHATE ALDOLASE FROM THE HYPERTHERMOPHILIC ARCHAEA Aeropyrum pernix.
J.Biol.Chem., 278, 2003
1N9N
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BU of 1n9n by Molmil
Crystal structure of the Phot-LOV1 domain from Chlamydomonas reinhardtii in illuminated state. Data set of a single crystal.
Descriptor: FLAVIN MONONUCLEOTIDE, putative blue light receptor
Authors:Fedorov, R, Schlichting, I, Hartmann, E, Domratcheva, T, Fuhrmann, M, Hegemann, P.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii.
Biophys.J., 84, 2003
4N18
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BU of 4n18 by Molmil
Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase family protein from Klebsiella pneumoniae 342
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CITRIC ACID, D-isomer specific 2-hydroxyacid dehydrogenase family protein
Authors:Bacal, P, Shabalin, I.G, Cooper, D.R, Majorek, K.A, Osinski, T, Hillerich, B.S, Hammonds, J, Nawar, A, Stead, M, Chowdhury, S, Gizzi, A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-10-03
Release date:2013-10-16
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase family protein from Klebsiella pneumoniae 342
To be Published
1YFC
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BU of 1yfc by Molmil
Solution nmr structure of a yeast iso-1-ferrocytochrome C
Descriptor: HEME C, YEAST ISO-1-FERROCYTOCHROME C
Authors:Baistrocchi, P, Banci, L, Bertini, I, Turano, P, Bren, K.L, Gray, H.B.
Deposit date:1996-08-08
Release date:1997-03-12
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of Saccharomyces cerevisiae reduced iso-1-cytochrome c.
Biochemistry, 35, 1996
1YIC
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BU of 1yic by Molmil
THE OXIDIZED SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C, ISO-1, HEME C
Authors:Banci, L, Bertini, I, Bren, K.L, Gray, H.B, Sompornpisut, P, Turano, P.
Deposit date:1997-02-18
Release date:1997-07-23
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Solution structure of oxidized Saccharomyces cerevisiae iso-1-cytochrome c.
Biochemistry, 36, 1997
6GK5
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BU of 6gk5 by Molmil
Crystal structure of cytochrome P450 CYP267B1 from Sorangium cellulosum So ce56
Descriptor: Cytochrome P450 CYP267B1 protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2018-05-18
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into oxidation of medium-chain fatty acids and flavanone by myxobacterial cytochrome P450 CYP267B1.
Biochem. J., 475, 2018
6AZI
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BU of 6azi by Molmil
1.75 Angstrom Resolution Crystal Structure of D-alanyl-D-alanine Endopeptidase from Enterobacter cloacae in Complex with Covalently Bound Boronic Acid
Descriptor: BORATE ION, D-alanyl-D-alanine endopeptidase
Authors:Minasov, G, Wawrzak, Z, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-09-11
Release date:2017-10-04
Last modified:2023-05-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:1.75 Angstrom Resolution Crystal Structure of D-alanyl-D-alanine Endopeptidase from Enterobacter cloacae in Complex with Covalently Bound Boronic Acid.
To be Published

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