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PDB: 17801 results

1S5Q
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Solution Structure of Mad1 SID-mSin3A PAH2 Complex
Descriptor: MAD protein, Sin3a protein
Authors:Swanson, K.A, Knoepfler, P.S, Huang, K, Kang, R.S, Cowley, S.M, Laherty, C.D, Eisenman, R.N, Radhakrishnan, I.
Deposit date:2004-01-21
Release date:2004-07-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations.
Nat.Struct.Mol.Biol., 11, 2004
6GK6
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BU of 6gk6 by Molmil
Crystal structure of myxobacterial cytochrome P450 CYP267B1 in complex with myristic acid
Descriptor: Cytochrome P450 CYP267B1 protein, MYRISTIC ACID, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2018-05-18
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into oxidation of medium-chain fatty acids and flavanone by myxobacterial cytochrome P450 CYP267B1.
Biochem. J., 475, 2018
1W6R
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BU of 1w6r by Molmil
Complex of TcAChE with galanthamine derivative
Descriptor: (-)-GALANTHAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Greenblatt, H.M, Guillou, C, Guenard, D, Badet, B, Thal, C, Silman, I, Sussman, J.L.
Deposit date:2004-08-23
Release date:2004-11-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design.
J.Am.Chem.Soc., 126, 2004
5LW6
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Crystal structure of a Se-Met substituted Dictyostelium discoideum ADP-ribose binding macrodomain (residues 342-563) of DDB_G0293866
Descriptor: DDB_G0293866
Authors:Leys, D, Barkauskaite, E, Pinero, B.B, Ahel, I.
Deposit date:2016-09-15
Release date:2016-09-28
Last modified:2016-10-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of ADP-ribosylation in regulating DNA interstrand crosslink repair.
J.Cell.Sci., 129, 2016
8BRI
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BU of 8bri by Molmil
VaPomAB MSP1D1 nanodisc
Descriptor: Chemotaxis protein PomA, Flagellar motor protein
Authors:Hu, H, Taylor, N.M.I.
Deposit date:2022-11-23
Release date:2023-06-14
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit.
Nat Commun, 14, 2023
5LCY
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BU of 5lcy by Molmil
Formaldehyde-Responsive Regulator FrmR E64H variant from Salmonella enterica serovar Typhimurium
Descriptor: Frmr
Authors:Pohl, E, Robinson, N, Osman, D, Piergentili, C, Uson, I.
Deposit date:2016-06-22
Release date:2016-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The Effectors and Sensory Sites of Formaldehyde-responsive Regulator FrmR and Metal-sensing Variant.
J.Biol.Chem., 291, 2016
6B0N
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BU of 6b0n by Molmil
Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp140, ...
Authors:Sarkar, A, Irimia, A, Wilson, I.A.
Deposit date:2017-09-14
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of a cleavage-independent HIV Env recapitulates the glycoprotein architecture of the native cleaved trimer.
Nat Commun, 9, 2018
1W75
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BU of 1w75 by Molmil
Native Orthorhombic form of Torpedo californica acetylcholinesterase (AChE)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE
Authors:Greenblatt, H.M, Botti, S, Argaman, A, Silman, I, Sussman, J.L.
Deposit date:2004-08-29
Release date:2004-11-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design.
J.Am.Chem.Soc., 126, 2004
8BI4
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BU of 8bi4 by Molmil
Helical shell of CCMV capsid protein on DNA origami 6HB-2k
Descriptor: Coat protein
Authors:Kumpula, E.-P, Seitz, I, Kostiainen, M.A, Huiskonen, J.T.
Deposit date:2022-11-01
Release date:2023-07-05
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:DNA-origami-directed virus capsid polymorphism.
Nat Nanotechnol, 18, 2023
4JHX
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BU of 4jhx by Molmil
Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with carbamoylphosphate and arginine
Descriptor: ARGININE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shabalin, I.G, Bacal, P, Winsor, J, Grimshaw, S, Grabowski, M, Chordia, M.D, Shuvalova, L, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-03-05
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
To be Published
2XNU
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BU of 2xnu by Molmil
Acetylcholine binding protein (AChBP) as template for hierarchical in silico screening procedures to identify structurally novel ligands for the nicotinic receptors
Descriptor: 2-(2-(4-PHENYLPIPERIDIN-1-YL)ETHYL)-1H-INDOLE, SOLUBLE ACETYLCHOLINE RECEPTOR
Authors:Rucktooa, P, Akdemir, A, deEsch, I, Sixma, T.K.
Deposit date:2010-08-06
Release date:2011-08-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Acetylcholine Binding Protein (Achbp) as Template for Hierarchical in Silico Screening Procedures to Identify Structurally Novel Ligands for the Nicotinic Receptors.
Bioorg.Med.Chem., 19, 2011
8BJA
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BU of 8bja by Molmil
Structure of the human UBR5 Dimer.
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Hodakova, Z, Grishkovskaya, I, Haselbach, D.
Deposit date:2022-11-03
Release date:2023-07-12
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of the chain-elongating E3 ubiquitin ligase UBR5.
Embo J., 42, 2023
3HVU
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BU of 3hvu by Molmil
1.95 Angstrom Crystal Structure of Complex of Hypoxanthine-Guanine Phosphoribosyltransferase from Bacillus anthracis with 2-(N-morpholino)ethanesulfonic acid (MES)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Hypoxanthine phosphoribosyltransferase, SODIUM ION
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-06-16
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:1.95 Angstrom Crystal Structure of Complex of Hypoxanthine-Guanine Phosphoribosyltransferase from Bacillus anthracis with 2-(N-morpholino)ethanesulfonic acid (MES)
TO BE PUBLISHED
3QQO
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BU of 3qqo by Molmil
Crystal structure of HA2 R106H mutant of H2 hemagglutinin, acidic pH form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Xu, R, Wilson, I.A.
Deposit date:2011-02-15
Release date:2011-03-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin.
J.Virol., 85, 2011
2XPC
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BU of 2xpc by Molmil
Second-generation sulfonamide inhibitors of MurD: Activity optimisation with conformationally rigid analogues of D-glutamic acid
Descriptor: (1R,3R,4S)-4-[({6-[(4-CYANO-2-FLUOROBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)AMINO]CYCLOHEXANE-1,3-DICARBOXYLIC ACID, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Sosic, I, Barreteau, H, Simcic, M, Sink, R, Cesar, J, Golic-Grdadolnik, S, Contreras-Martel, C, Dessen, A, Amoroso, A, Joris, B, Blanot, D, Gobec, S.
Deposit date:2010-08-26
Release date:2011-05-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Second-Generation Sulfonamide Inhibitors of D- Glutamic Acid-Adding Enzyme: Activity Optimisation with Conformationally Rigid Analogues of D- Glutamic Acid.
Eur.J.Med.Chem, 46, 2011
6GYG
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BU of 6gyg by Molmil
X-ray structure of the apo form of the establishement gene regulator Reg576 of the G+ plasmid p576
Descriptor: Transcription regulator Reg576
Authors:Crespo, I, Meijer, W.J.J, Boer, D.R.
Deposit date:2018-06-29
Release date:2018-10-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Novel regulatory mechanism of establishment genes of conjugative plasmids.
Nucleic Acids Res., 46, 2018
3I6A
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BU of 3i6a by Molmil
Human GST A1-1 GIMF mutant with Glutathione
Descriptor: GLUTATHIONE, Glutathione S-transferase A1
Authors:Balogh, L.M, Le Trong, I, Stenkamp, R.E, Atkins, W.M.
Deposit date:2009-07-06
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural analysis of a glutathione transferase A1-1 mutant tailored for high catalytic efficiency with toxic alkenals.
Biochemistry, 48, 2009
6HAR
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BU of 6har by Molmil
Crystal structure of Mesotrypsin in complex with APPI-M17C/I18F/F34C
Descriptor: 1,2-ETHANEDIOL, Amyloid-beta A4 protein, CALCIUM ION, ...
Authors:Shahar, A, Cohen, I, Radisky, E, Papo, N.
Deposit date:2018-08-08
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Disulfide engineering of human Kunitz-type serine protease inhibitors enhances proteolytic stability and target affinity toward mesotrypsin.
J.Biol.Chem., 294, 2019
5WBD
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BU of 5wbd by Molmil
Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins - N49A
Descriptor: ACETATE ION, Streptavidin, [N-(2-{bis[2-(pyridin-2-yl-kappaN)ethyl]amino-kappaN}ethyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamide](hydroxy)copper
Authors:Mann, S.I, Heinisch, T, Ward, T.R, Borovik, A.S.
Deposit date:2017-06-28
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins.
J. Am. Chem. Soc., 139, 2017
3QKK
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Spirochromane Akt Inhibitors
Descriptor: GSK-3 beta peptide, N-(2-ethoxyethyl)-N-{(2S)-2-hydroxy-3-[(2R)-6-hydroxy-4-oxo-3,4-dihydro-1'H-spiro[chromene-2,3'-piperidin]-1'-yl]propyl}-2,6-dimethylbenzenesulfonamide, RAC-alpha serine/threonine-protein kinase
Authors:Kallan, N.C, Spencer, K.L, Blake, J.F, Xu, R, Heizer, J, Bencsik, J.R, Mitchell, I.S, Gloor, S.L, Martinson, M, Risom, T, Gross, S.D, Morales, T, Vigers, G.P.A, Brandhuber, B.J, Skelton, N.J.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and SAR of spirochromane Akt inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
3A24
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BU of 3a24 by Molmil
Crystal structure of BT1871 retaining glycosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, alpha-galactosidase
Authors:Okuyama, M, Kitamura, M, Hondoh, H, Tanaka, I, Yao, M.
Deposit date:2009-04-28
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of retaining alpha-galactosidase belonging to glycoside hydrolase family 97.
J.Mol.Biol., 392, 2009
4L27
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BU of 4l27 by Molmil
Crystal structure of delta1-39 and delta516-525 human cystathionine beta-synthase D444N mutant containing C-terminal 6xHis tag
Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE
Authors:Ereno, J, Majtan, T, Oyenarte, I, Kraus, J.P, Martinez, L.A.
Deposit date:2013-06-04
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.391 Å)
Cite:Structural basis of regulation and oligomerization of human cystathionine beta-synthase, the central enzyme of transsulfuration.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KZW
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BU of 4kzw by Molmil
Structure of the carbohydrate-recognition domain of the C-type lectin mincle
Descriptor: C-TYPE LECTIN MINCLE, CALCIUM ION, CITRATE ANION, ...
Authors:Feinberg, H, Jegouzo, S.A.F, Rowntree, T.J.W, Guan, Y, Brash, M.A, Taylor, M.E, Weis, W.I, Drickamer, K.
Deposit date:2013-05-30
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism for Recognition of an Unusual Mycobacterial Glycolipid by the Macrophage Receptor Mincle.
J.Biol.Chem., 288, 2013
4L3V
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BU of 4l3v by Molmil
Crystal structure of delta516-525 human cystathionine beta-synthase
Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE
Authors:Ereno, J, Majtan, T, Oyenarte, I, Kraus, J.P, Martinez, L.A.
Deposit date:2013-06-07
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.628 Å)
Cite:Structural basis of regulation and oligomerization of human cystathionine beta-synthase, the central enzyme of transsulfuration.
Proc.Natl.Acad.Sci.USA, 110, 2013
6HXA
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AntI from P. luminescens catalyses terminal polyketide shortening in the biosynthesis of anthraquinones
Descriptor: AntI, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL
Authors:Zhou, Q, Braeuer, A, Grammbitter, G, Schmalhofer, M, Saura, P, Adihou, H, Kaila, V.R.I, Groll, M, Bode, H.
Deposit date:2018-10-16
Release date:2019-08-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular mechanism of polyketide shortening in anthraquinone biosynthesis ofPhotorhabdus luminescens.
Chem Sci, 10, 2019

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