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PDB: 258 件

3S2D
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RNA Polymerase II Initiation Complex with a 5-nt RNA containing a 5Br-U
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*AP*CP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1Q
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RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
5VDI
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Crystal Structure of Human Glycine Receptor alpha-3 Mutant N38Q Bound to AM-3607, Glycine, and Ivermectin
分子名称: (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, (3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one, GLYCINE, ...
著者Shaffer, P.L, Huang, X, Chen, H.
登録日2017-04-03
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structures of Human GlyR alpha 3 Bound to Ivermectin.
Structure, 25, 2017
3S17
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RNA Polymerase II Initiation Complex with a 9-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S15
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RNA Polymerase II Initiation Complex with a 7-nt RNA
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-14
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S2H
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BU of 3s2h by Molmil
RNA Polymerase II Initiation Complex with a 6-nt RNA containing a 2[prime]-iodo ATP
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-16
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
3S1M
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RNA Polymerase II Initiation Complex with a 5-nt RNA (variant 1)
分子名称: DNA (5'-D(*CP*TP*AP*CP*CP*GP*AP*TP*AP*AP*GP*CP*AP*GP*AP*CP*GP*AP*TP*CP*GP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Liu, X, Bushnell, D.A, Silva, D.A, Huang, X, Kornberg, R.D.
登録日2011-05-15
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Initiation complex structure and promoter proofreading.
Science, 333, 2011
5VDH
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BU of 5vdh by Molmil
Crystal Structure of Human Glycine Receptor alpha-3 Bound to AM-3607, Glycine, and Ivermectin
分子名称: (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, (3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Shaffer, P.L, Huang, X, Chen, H.
登録日2017-04-03
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal Structures of Human GlyR alpha 3 Bound to Ivermectin.
Structure, 25, 2017
6WJH
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BU of 6wjh by Molmil
Crystal structure of MAGE-A11 bound to the PCF11 degron
分子名称: Fusion protein of PCF11 and MAGE-A11
著者Miller, D.J, Huang, X.
登録日2020-04-13
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis for substrate recognition and chemical inhibition of oncogenic MAGE ubiquitin ligases.
Nat Commun, 11, 2020
1XC9
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BU of 1xc9 by Molmil
Structure of a high-fidelity polymerase bound to a benzo[a]pyrene adduct that blocks replication
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA polymerase I, DNA primer strand, ...
著者Hsu, G.W, Huang, X, Luneva, N.P, Geacintov, N.E, Beese, L.S.
登録日2004-09-01
公開日2004-12-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a High Fidelity DNA Polymerase Bound to a Benzo[a]pyrene Adduct That Blocks Replication
J.Biol.Chem., 280, 2005
1Y9H
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BU of 1y9h by Molmil
Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*AP*TP*(5CM)P*(BPG)P*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'
著者Zhang, N, Lin, C, Huang, X, Kolbanovskiy, A, Hingerty, B.E, Amin, S, Broyde, S, Geacintov, N.E, Patel, D.J.
登録日2004-12-15
公開日2005-03-22
最終更新日2024-04-24
実験手法SOLUTION NMR
主引用文献Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
J.Mol.Biol., 346, 2005
1T36
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BU of 1t36 by Molmil
Crystal structure of E. coli carbamoyl phosphate synthetase small subunit mutant C248D complexed with uridine 5'-monophosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Carbamoyl-phosphate synthase large chain, ...
著者Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
登録日2004-04-24
公開日2004-09-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Long-range allosteric transitions in carbamoyl phosphate synthetase.
Protein Sci., 13, 2004
5GNS
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BU of 5gns by Molmil
Structures of human Mitofusin 1 provide insight into mitochondrial tethering
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Mitofusin-1
著者Qi, Y, Yan, L, Yu, C, Guo, X, Zhou, X, Hu, X, Huang, X, Rao, Z, Lou, Z, Hu, J.
登録日2016-07-24
公開日2016-12-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structures of human Mitofusin 1 provide insight into mitochondrial tethering
To Be Published
9AXC
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BU of 9axc by Molmil
Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, GST26/CRAF chimera, N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide
著者Quade, B, Cohen, S.E, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (4.16 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AYA
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BU of 9aya by Molmil
Crystal structure of CRAF/MEK complex with NST-628 and active RAF dimer
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide, ...
著者Quade, B, Huang, X.
登録日2024-03-07
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AXA
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BU of 9axa by Molmil
CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
分子名称: 14-3-3 protein sigma, Dual specificity mitogen-activated protein kinase kinase 1, GST26/CRAF chimera, ...
著者Quade, B, Cohen, S.E, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AY7
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BU of 9ay7 by Molmil
Crystal structure of CRAF/MEK1 complex with NST-628 and inactive RAF
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Quade, B, Huang, X.
登録日2024-03-07
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AXH
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BU of 9axh by Molmil
Crystal structure of KSR1/MEK1 complex heterotetramer with NST-628
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Quade, B, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AXM
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BU of 9axm by Molmil
Crystal structure of ARAF/MEK1 complex with NST-628 and a RAF dimer
分子名称: 1,2-ETHANEDIOL, Dual specificity mitogen-activated protein kinase kinase 1, GLYCEROL, ...
著者Quade, B, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
5J97
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BU of 5j97 by Molmil
Dimerization domain of cytoplasmic activation/proliferation-associated protein-2 (caprin-2)
分子名称: Caprin-2
著者Wu, Y, Zhu, J, Huang, X, Du, Z.
登録日2016-04-08
公開日2017-08-09
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Dimerization domain of cytoplasmic activation/proliferation-associated protein-2 (caprin-2)
To Be Published
9AXY
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BU of 9axy by Molmil
Crystal structure of BRAF/MEK complex with NST-628 and inactive RAF
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, N-[3-fluoro-4-({7-[(3-fluoropyridin-2-yl)oxy]-4-methyl-2-oxo-2H-1-benzopyran-3-yl}methyl)pyridin-2-yl]-N'-methylsulfuric diamide, ...
著者Quade, B, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
9AXX
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BU of 9axx by Molmil
Crystal structure of BRAF/MEK1 complex with NST-628 and an active RAF dimer
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Quade, B, Huang, X.
登録日2024-03-06
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The pan-RAF-MEK non degrading molecular glue NST-628 is a potent and brain penetrant inhibitor of the RAS-MAPK pathway with activity across diverse RAS- and RAF-driven cancers.
Cancer Discov, 2024
6UGL
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BU of 6ugl by Molmil
VqmA bound to DPO
分子名称: 3,5-dimethylpyrazin-2(1H)-one, Helix-turn-helix transcriptional regulator
著者Paczkowski, J.E, Huang, X.
登録日2019-09-26
公開日2020-01-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Mechanism underlying autoinducer recognition in theVibrio choleraeDPO-VqmA quorum-sensing pathway.
J.Biol.Chem., 295, 2020
4ODE
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BU of 4ode by Molmil
Co-Crystal Structure of MDM2 with Inhibitor Compound 4
分子名称: (2-{[(3R,5R,6S)-1-[(1S)-2-(tert-butylsulfonyl)-1-cyclopropylethyl]-6-(4-chloro-3-fluorophenyl)-5-(3-chlorophenyl)-3-methyl-2-oxopiperidin-3-yl]methyl}-1,3-thiazol-5-yl)acetic acid, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
著者Shaffer, P.L, Huang, X, Yakowec, P, Long, A.M.
登録日2014-01-10
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel Inhibitors of the MDM2-p53 Interaction Featuring Hydrogen Bond Acceptors as Carboxylic Acid Isosteres.
J.Med.Chem., 57, 2014
4OGV
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BU of 4ogv by Molmil
Co-Crystal Structure of MDM2 with Inhibitor Compound 49
分子名称: E3 ubiquitin-protein ligase Mdm2, [(2S,5R,6R)-4-[(2S)-1-(tert-butylsulfonyl)butan-2-yl]-6-(3-chlorophenyl)-5-(4-chlorophenyl)-3-oxomorpholin-2-yl]acetic acid
著者Shaffer, P.L, Huang, X, Yakowec, P, Long, A.M.
登録日2014-01-16
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Novel Inhibitors of the MDM2-p53 Interaction Featuring Hydrogen Bond Acceptors as Carboxylic Acid Isosteres.
J.Med.Chem., 57, 2014

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