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PDB: 301 件

6J4Q
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Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and functional implications
分子名称: GLYCEROL, N-[(2S)-4-chloro-3-oxo-1-phenyl-butan-2-yl]-4-methyl-benzenesulfonamide, Small vasohibin-binding protein, ...
著者Wang, N, Bao, H, Huang, H.
登録日2019-01-10
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.
Nat.Struct.Mol.Biol., 26, 2019
7VJM
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Aca1 in complex with 19bp palindromic DNA substrate
分子名称: DNA (5'-D(*AP*TP*TP*AP*GP*GP*CP*AP*CP*AP*TP*TP*GP*TP*GP*CP*CP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*GP*GP*CP*AP*CP*AP*AP*TP*GP*TP*GP*CP*CP*TP*AP*A)-3'), anti-CRISPR-associated protein Aca1
著者Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
登録日2021-09-28
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
7VJP
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Selenomethionine-derived Pectobacterium phage ZF40 apo-Aca2
分子名称: SULFATE ION, anti-CRISPR-associated protein Aca2
著者Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
登録日2021-09-28
公開日2021-10-20
最終更新日2022-02-02
実験手法X-RAY DIFFRACTION (1.594 Å)
主引用文献Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
6M11
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BU of 6m11 by Molmil
Crystal structure of Rnase L in complex with Sunitinib
分子名称: 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE, N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide, PHOSPHATE ION, ...
著者Tang, J, Huang, H.
登録日2020-02-24
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Sunitinib inhibits RNase L by destabilizing its active dimer conformation.
Biochem.J., 477, 2020
6M13
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Crystal structure of Rnase L in complex with Toceranib
分子名称: 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-(2-pyrrolidin-1-ylethyl)-1H-pyrrole-3-carboxamide, PHOSPHATE ION, Ribonuclease L, ...
著者Tang, J, Huang, H.
登録日2020-02-24
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Sunitinib inhibits RNase L by destabilizing its active dimer conformation.
Biochem.J., 477, 2020
4A4S
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BU of 4a4s by Molmil
UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
分子名称: 5'-R(*GP*GP*AP*CP*CP*CP*GP*GP*CP*UP*CP*AP*CP*GP *CP*UP*GP*GP*GP*UP*CP*C)-3'
著者Zhao, Q, Huang, H, Nagaswamy, U, Xia, Y, Gao, X, Fox, G.
登録日2011-10-20
公開日2012-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unac Tetraloops: To What Extent Can They Mimic Gnra Tetraloops
Biopolymers, 97, 2012
4A4U
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UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
分子名称: 5'-R(*GP*GP*AP*CP*CP*CP*GP*GP*CP*UP*GP*AP*CP*GP *CP*UP*GP*GP*GP*UP*CP*C)-3'
著者Zhao, Q, Huang, H, Nagaswamy, U, Xia, Y, Gao, X, Fox, G.
登録日2011-10-20
公開日2012-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unac Tetraloops: To What Extent Can They Mimic Gnra Tetraloops
Biopolymers, 97, 2012
6J4P
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BU of 6j4p by Molmil
Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and functional implications
分子名称: N-[(3R)-4-ethoxy-3-hydroxy-4-oxobutanoyl]-L-tyrosine, Small vasohibin-binding protein, Tubulinyl-Tyr carboxypeptidase 2
著者Wang, N, Bao, H, Huang, H.
登録日2019-01-10
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.
Nat.Struct.Mol.Biol., 26, 2019
6J4U
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BU of 6j4u by Molmil
Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and functional implications
分子名称: Small vasohibin-binding protein, Tubulinyl-Tyr carboxypeptidase 1
著者Wang, N, Bao, H, Huang, H.
登録日2019-01-10
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.
Nat.Struct.Mol.Biol., 26, 2019
6KBU
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BU of 6kbu by Molmil
Crystal structure of yedK
分子名称: GLYCEROL, SOS response-associated protein
著者Wang, N, Bao, H, Huang, H.
登録日2019-06-26
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KIJ
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Crystal structure of yedK with ssDNA containing an abasic site
分子名称: DNA (5'-D(*GP*AP*TP*TP*CP*GP*TP*CP*G)-3'), GLYCEROL, PENTANE-3,4-DIOL-5-PHOSPHATE, ...
著者Wang, N, Bao, H, Huang, H.
登録日2019-07-18
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KBX
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Crystal structure of yedK in complex with ssDNA containing abasic site
分子名称: DNA 5'-D (*CP*GP*GP*TP* (PED)P*GP*AP*TP*TP*C)-3', SOS response-associated protein
著者Wang, N, Bao, H, Huang, H.
登録日2019-06-26
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.221 Å)
主引用文献Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KBS
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BU of 6kbs by Molmil
Crystal structure of yedK in complex with ssDNA
分子名称: DNA (5'-D(*CP*GP*GP*TP*CP*GP*AP*TP*TP*C)-3'), SOS response-associated protein
著者Wang, N, Bao, H, Huang, H.
登録日2019-06-26
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KCQ
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BU of 6kcq by Molmil
Crystal structure of yedK with ssDNA containing an abasic site
分子名称: DNA (5'-D(P*AP*AP*AP*(PED)P*AP*A)-3'), SOS response-associated protein
著者Wang, N, Bao, H, Huang, H.
登録日2019-06-28
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
5TVT
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BU of 5tvt by Molmil
Structure of Maternal Embryonic Leucine Zipper Kinase
分子名称: 9-(3,5-dichloro-4-hydroxyphenyl)-1-{trans-4-[(dimethylamino)methyl]cyclohexyl}-3-methyl-3,4-dihydropyrimido[5,4-c][1,5]naphthyridin-2(1H)-one, Maternal embryonic leucine zipper kinase
著者Seo, H.-Y, Huang, H, Gray, N.S, Dhe-Paganon, S.
登録日2016-11-10
公開日2017-11-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of Maternal Embryonic Leucine Zipper Kinase
To Be Published
7VJN
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BU of 7vjn by Molmil
Crystal structure of anti-CRISPR-associated protein Aca1 in Pseudomonas phage JBD30
分子名称: anti-CRISPR-associated protein Aca1
著者Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
登録日2021-09-28
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
6M12
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BU of 6m12 by Molmil
Crystal Structure of Rnase L in complex with SU11652
分子名称: 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE, PHOSPHATE ION, Ribonuclease L, ...
著者Tang, J, Huang, H.
登録日2020-02-24
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Sunitinib inhibits RNase L by destabilizing its active dimer conformation.
Biochem.J., 477, 2020
7XFZ
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BU of 7xfz by Molmil
CryoEM structure of type IV-A Csf-crRNAsp14-dsDNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG1
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BU of 7xg1 by Molmil
CryoEM structure of type IV-A Csf-crRNA binary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment
Mol.Cell, 83, 2023
7XG2
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BU of 7xg2 by Molmil
CryoEM structure of type IV-A NTS-nicked dsDNA bound Csf-crRNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG0
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BU of 7xg0 by Molmil
CryoEM structure of type IV-A Csf-crRNA-dsDNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG4
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BU of 7xg4 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex in a second state
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG3
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BU of 7xg3 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7Y84
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BU of 7y84 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease
分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y83
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CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to non-self RNA target
分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022

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件を2024-05-29に公開中

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