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PDB: 182 件

2VWA
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Crystal structure of a sporozoite protein essential for liver stage development of malaria parasite
分子名称: PHOSPHATIDYLETHANOLAMINE, PUTATIVE UNCHARACTERIZED PROTEIN PF13_0012
著者Sharma, A, Sharma, A, Yogavel, M, Gill, J, Akhouri, R.R.
登録日2008-06-20
公開日2008-07-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of Soluble Domain of Malaria Sporozoite Protein Uis3 in Complex with Lipid.
J.Biol.Chem., 283, 2008
3M57
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SET7/9 Y245A in complex with TAF10 peptide and AdoHcy
分子名称: GLYCEROL, Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
3M5A
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SET7/9 Y245A in complex with TAF10-K189me3 peptide and AdoHcy
分子名称: COBALT (II) ION, GLYCEROL, Histone-lysine N-methyltransferase SETD7, ...
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
3M59
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SET7/9 Y245A in complex with TAF10-K189me2 peptide and AdoHcy
分子名称: COBALT (II) ION, GLYCEROL, Histone-lysine N-methyltransferase SETD7, ...
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
7SQX
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Crystal Structure of Pseudomonas aeruginosa lytic polysaccharide monooxygenase CbpD
分子名称: AMMONIUM ION, Chitin-binding protein CbpD
著者Dade, C, Douzi, B, Ball, G, Voulhoux, R, Forest, K.T.
登録日2021-11-07
公開日2022-07-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of CbpD clarifies substrate-specificity motifs in chitin-active lytic polysaccharide monooxygenases.
Acta Crystallogr D Struct Biol, 78, 2022
4N0G
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Crystal Structure of PYL13-PP2CA complex
分子名称: Abscisic acid receptor PYL13, MAGNESIUM ION, Protein phosphatase 2C 37, ...
著者Li, W, Wang, L, Sheng, X, Yan, C, Zhou, R, Hang, J, Yin, P, Yan, N.
登録日2013-10-01
公開日2013-11-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.382 Å)
主引用文献Molecular basis for the selective and ABA-independent inhibition of PP2CA by PYL13
Cell Res., 23, 2013
3M56
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SET7/9 Y305F in complex with TAF10-K189me2 peptide and AdoHcy
分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10-K189me2 PEPTIDE
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
7WZO
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Crystal structure of the SARS-CoV-2 nucleocapsid protein N-terminal domain in complex with Ubl1
分子名称: Nucleoprotein, nsp3
著者Ni, X.C, Zhou, R.J, Lei, J.
登録日2022-02-18
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural insights into ribonucleoprotein dissociation by nucleocapsid protein interacting with non-structural protein 3 in SARS-CoV-2.
Commun Biol, 6, 2023
7D8X
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CryoEM structure of human gamma-secretase in complex with E2012 and L685458
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[(1S)-1-(4-fluorophenyl)ethyl]-3-[[3-methoxy-4-(4-methylimidazol-1-yl)phenyl]methylidene]piperidin-2-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yang, G, Zhou, R, Guo, X, Lei, J, Yan, C, Shi, Y.
登録日2020-10-11
公開日2021-01-27
最終更新日2021-02-03
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of gamma-secretase inhibition and modulation by small molecule drugs.
Cell, 184, 2021
7Y5X
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CryoEM structure of PS2-containing gamma-secretase treated with MRK-560
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2022-06-17
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
7Y5T
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CryoEM structure of PS1-containing gamma-secretase in complex with MRK-560
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2022-06-17
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
7Y5Z
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CryoEM structure of human PS2-containing gamma-secretase
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2022-06-18
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
3M54
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SET7/9 Y305F in complex with TAF10 peptide and AdoHcy
分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
2I6Y
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Structure and Mechanism of Mycobacterium tuberculosis Salicylate Synthase, MbtI
分子名称: Anthranilate synthase component I, putative
著者Zwahlen, J, Subramaniapillai, K, Zhou, R, Kisker, C, Tonge, P.J.
登録日2006-08-29
公開日2007-06-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and mechanism of MbtI, the salicylate synthase from Mycobacterium tuberculosis
Biochemistry, 46, 2007
4R12
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BU of 4r12 by Molmil
Crystal structure of the gamma-secretase component Nicastrin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Xie, T, Yan, C, Zhou, R, Zhao, Y, Sun, L, Yang, G, Lu, P, Ma, D, Shi, Y.
登録日2014-08-03
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the gamma-secretase component nicastrin.
Proc.Natl.Acad.Sci.USA, 111, 2014
8K8E
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Human gamma-secretase in complex with a substrate mimetic
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Shi, Y.G, Zhou, R, Wolfe, M.S.
登録日2023-07-29
公開日2024-01-31
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Familial Alzheimer mutations stabilize synaptotoxic gamma-secretase-substrate complexes.
Cell Rep, 43, 2024
3F9X
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Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y334F / H4-Lys20me2 / AdoHcy
分子名称: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
著者Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
登録日2008-11-14
公開日2008-11-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4PPS
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Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with an A-CD ring estrogen derivative
分子名称: (1S,3aR,5R,7aS)-5-(4-hydroxyphenyl)-7a-methyloctahydro-1H-inden-1-ol, Estrogen receptor, Nuclear receptor coactivator 2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Parent, A.A, Hughes, T.S, Pollock, J.A, Gjyshi, O, Cavett, V, Nowak, J, Garcia-Ordonez, R.D, Houtman, R, Griffin, P.R, Kojetin, D.J, Katzenellenbogen, J.A, Conkright, M.D, Nettles, K.W.
登録日2014-02-27
公開日2014-05-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.929 Å)
主引用文献Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
Elife, 3, 2014
3F9W
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Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y334F / H4-Lys20 / AdoHcy
分子名称: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
著者Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
登録日2008-11-14
公開日2008-11-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3F9Y
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Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y334F / H4-Lys20me1 / AdoHcy
分子名称: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
著者Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
登録日2008-11-14
公開日2008-11-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3F9Z
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Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y245F / H4-Lys20 / AdoHcy
分子名称: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
著者Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
登録日2008-11-14
公開日2008-11-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4PP6
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Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Resveratrol
分子名称: Estrogen receptor, Nuclear receptor coactivator 2, RESVERATROL
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Parent, A.A, Hughes, T.S, Pollock, J.A, Gjyshi, O, Cavett, V, Nowak, J, Garcia-Ordonez, R.D, Houtman, R, Griffin, P.R, Kojetin, D.J, Katzenellenbogen, J.A, Conkright, M.D, Nettles, K.W.
登録日2014-02-26
公開日2014-05-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
Elife, 3, 2014
4PPP
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Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Fluoro-Resveratrol
分子名称: 5-[(E)-2-(3-fluoro-4-hydroxyphenyl)ethenyl]benzene-1,3-diol, Estrogen receptor, Nuclear receptor coactivator 2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Parent, A.A, Hughes, T.S, Pollock, J.A, Gjyshi, O, Cavett, V, Nowak, J, Garcia-Ordonez, R.D, Houtman, R, Griffin, P.R, Kojetin, D.J, Katzenellenbogen, J.A, Conkright, M.D, Nettles, K.W.
登録日2014-02-27
公開日2014-05-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.686 Å)
主引用文献Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
Elife, 3, 2014
2EUA
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Structure and Mechanism of MenF, the Menaquinone-Specific Isochorismate Synthase from Escherichia Coli
分子名称: D(-)-TARTARIC ACID, Menaquinone-specific isochorismate synthase
著者Kolappan, S, Kisker, C, Zwahlen, J, Zhou, R, Tonge, P.J.
登録日2005-10-28
公開日2006-12-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Lysine 190 is the catalytic base in MenF, the menaquinone-specific isochorismate synthase from Escherichia coli: implications for an enzyme family.
Biochemistry, 46, 2007
3Q9O
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Full-length Cholix toxin from Vibrio cholerae in complex with NAD
分子名称: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, exotoxin A
著者Merrill, A.R, Jorgensen, R, Fieldhouse, R.J.
登録日2011-01-09
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.793 Å)
主引用文献The 1.8 a cholix toxin crystal structure in complex with NAD+ and evidence for a new kinetic model.
J.Biol.Chem., 287, 2012

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