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PDB: 108 件
3UY8
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Designed protein KE59 R5_11/5F
分子名称: Kemp eliminase KE59 R5_11/5F, SULFATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-06
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UXD
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Designed protein KE59 R1 7/10H with dichlorobenzotriazole (DBT)
分子名称: 5,7-dichloro-1H-benzotriazole, Kemp eliminase KE59 R1 7/10H, PHOSPHATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-05
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UY7
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Designed protein KE59 R1 7/10H with G130S mutation
分子名称: Kemp eliminase KE59 R1 7/10H, SODIUM ION, SULFATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-06
公開日2012-06-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UXA
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BU of 3uxa by Molmil
Designed protein KE59 R1 7/10H
分子名称: Kemp eliminase KE59 R1 7/10H, PHOSPHATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-05
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UZ5
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Designed protein KE59 R13 3/11H
分子名称: 5,7-dichloro-1H-benzotriazole, Kemp eliminase KE59 R13 3/11H, PHOSPHATE ION, ...
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-07
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UYC
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Designed protein KE59 R8_2/7A
分子名称: Kemp eliminase KE59 R8_2/7A, PHOSPHATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-06
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
3MDC
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BU of 3mdc by Molmil
DNA polymerase lambda in complex with dFdCTP
分子名称: 2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate), DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3'), ...
著者Garcia-Diaz, M, Murray, M, Kunkel, T, Chou, K.M.
登録日2010-03-30
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Interaction between DNA Polymerase lambda and anticancer nucleoside analogs.
J.Biol.Chem., 285, 2010
3MDA
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DNA polymerase lambda in complex with araC
分子名称: DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(P*GP*CP*CP*G)-3'), ...
著者Garcia-Diaz, M, Murray, M, Kunkel, T, Chou, K.M.
登録日2010-03-30
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Interaction between DNA Polymerase lambda and anticancer nucleoside analogs.
J.Biol.Chem., 285, 2010
4CMQ
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BU of 4cmq by Molmil
Crystal structure of Mn-bound S.pyogenes Cas9
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MANGANESE (II) ION, SULFATE ION
著者Jinek, M, Jiang, F, Taylor, D.W, Sternberg, S.H, Kaya, E, Ma, E, Anders, C, Hauer, M, Zhou, K, Lin, S, Kaplan, M, Iavarone, A.T, Charpentier, E, Nogales, E, Doudna, J.A.
登録日2014-01-17
公開日2014-02-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structures of Cas9 Endonucleases Reveal RNA- Mediated Conformational Activation
Science, 343, 2014
6AL6
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BU of 6al6 by Molmil
Crystal structure HpiC1 in P42 space group
分子名称: 12-epi-hapalindole C/U synthase, CALCIUM ION
著者Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
登録日2017-08-07
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.088 Å)
主引用文献Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
1XFQ
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BU of 1xfq by Molmil
structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
登録日2004-09-15
公開日2005-08-16
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
1XFN
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NMR structure of the ground state of the photoactive yellow protein lacking the N-terminal part
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
登録日2004-09-15
公開日2005-08-16
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
6LFA
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BU of 6lfa by Molmil
Structure of the N-terminal domain of Wag31
分子名称: Cell wall synthesis protein Wag31, TRIETHYLENE GLYCOL
著者Chaudhuri, B.N, Choukate, K.
登録日2019-11-30
公開日2020-07-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of self-assembly in the lipid-binding domain of mycobacterial polar growth factor Wag31
Iucrj, 7, 2020
1GID
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BU of 1gid by Molmil
CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING
分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, P4-P6 RNA RIBOZYME DOMAIN
著者Cate, J.H, Gooding, A.R, Podell, E, Zhou, K, Golden, B.L, Kundrot, C.E, Cech, T.R, Doudna, J.A.
登録日1996-08-22
公開日1996-12-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a group I ribozyme domain: principles of RNA packing.
Science, 273, 1996
4CMP
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BU of 4cmp by Molmil
Crystal structure of S. pyogenes Cas9
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, SULFATE ION
著者Jinek, M, Jiang, F, Taylor, D.W, Sternberg, S.H, Kaya, E, Ma, E, Anders, C, Hauer, M, Zhou, K, Lin, S, Kaplan, M, Iavarone, A.T, Charpentier, E, Nogales, E, Doudna, J.A.
登録日2014-01-16
公開日2014-02-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation.
Science, 343, 2014
1H3J
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STRUCTURE OF RECOMBINANT COPRINUS CINEREUS PEROXIDASE DETERMINED TO 2.0 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ...
著者Petersen, J.F.W, Houborg, K, Harris, P, Larsen, S.
登録日2002-09-05
公開日2003-06-12
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Impact of the Physical and Chemical Environment on the Molecular Structure of Coprinus Cinereus Peroxidase
Acta Crystallogr.,Sect.D, 59, 2003
1KH6
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Crystal Structure of an RNA Tertiary Domain Essential to HCV IRES-mediated Translation Initiation.
分子名称: JIIIabc
著者Kieft, J.S, Zhou, K, Grech, A, Jubin, R, Doudna, J.A.
登録日2001-11-29
公開日2002-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of an RNA tertiary domain essential to HCV IRES-mediated translation initiation.
Nat.Struct.Biol., 9, 2002
2XLI
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BU of 2xli by Molmil
Crystal structure of the Csy4-crRNA complex, monoclinic form
分子名称: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
著者Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
登録日2010-07-20
公開日2010-09-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
1VC5
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BU of 1vc5 by Molmil
Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution
分子名称: Hepatitis Delta virus ribozyme, SODIUM ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-04
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VBZ
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Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution
分子名称: BARIUM ION, Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
2XLJ
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Crystal structure of the Csy4-crRNA complex, hexagonal form
分子名称: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
著者Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
登録日2010-07-20
公開日2010-09-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
2XLK
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BU of 2xlk by Molmil
Crystal structure of the Csy4-crRNA complex, orthorhombic form
分子名称: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
著者Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
登録日2010-07-21
公開日2010-09-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
1VBY
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BU of 1vby by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound
分子名称: Hepatitis Delta virus ribozyme, MANGANESE (II) ION, SODIUM ION, ...
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VBX
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Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution
分子名称: Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
1VC0
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Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution
分子名称: Hepatitis Delta virus ribozyme, STRONTIUM ION, U1 small nuclear ribonucleoprotein A
著者Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
登録日2004-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004

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