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PDB: 108 件

6NSJ
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CryoEM structure of Helicobacter pylori urea channel in closed state
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel
著者Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H.
登録日2019-01-24
公開日2019-04-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
6NSK
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CryoEM structure of Helicobacter pylori urea channel in open state.
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel
著者Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H.
登録日2019-01-24
公開日2019-04-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
5J3R
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BU of 5j3r by Molmil
Crystal structure of yeast monothiol glutaredoxin Grx6 in complex with a glutathione-coordinated [2Fe-2S] cluster
分子名称: FE2/S2 (INORGANIC) CLUSTER, GLUTATHIONE, Monothiol glutaredoxin-6
著者Abdalla, M, Dai, Y.-N, Chi, C.-B, Cheng, W, Cao, D.-D, Zhou, K, Ali, W, Chen, Y, Zhou, C.-Z.
登録日2016-03-31
公開日2016-10-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Crystal structure of yeast monothiol glutaredoxin Grx6 in complex with a glutathione-coordinated [2Fe-2S] cluster
Acta Crystallogr.,Sect.F, 72, 2016
7N8N
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BU of 7n8n by Molmil
Melbournevirus nucleosome like particle
分子名称: DNA (147-MER), Histone H2B-H2A doublet, Histone H4-H3 doublet
著者Liu, Y, Toner, C.M, Zhou, K, Bowerman, S, Luger, K.
登録日2021-06-15
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Virus-encoded histone doublets are essential and form nucleosome-like structures.
Cell, 184, 2021
6IPP
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BU of 6ipp by Molmil
Non-native ferritin 8-mer mutant-C90A/C102A/C130A/D144C
分子名称: FE (III) ION, Ferritin heavy chain
著者Zang, J, Chen, H, Zhou, K, Zhao, G.
登録日2018-11-03
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.699 Å)
主引用文献Disulfide-mediated conversion of 8-mer bowl-like protein architecture into three different nanocages.
Nat Commun, 10, 2019
5IFG
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BU of 5ifg by Molmil
Crystal structure of HigA-HigB complex from E. Coli
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Yang, J.S, Zhou, K, Gao, z.Q, Liu, Q.S, Dong, Y.H.
登録日2016-02-26
公開日2017-03-01
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structural insight into the E. coli HigBA complex
Biochem. Biophys. Res. Commun., 478, 2016
6UZB
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Anthrax toxin protective antigen channels bound to edema factor
分子名称: CALCIUM ION, Calmodulin-sensitive adenylate cyclase, Protective antigen
著者Hardenbrook, N.J, Liu, S, Zhou, K, Zhou, Z.H, Krantz, B.A.
登録日2019-11-14
公開日2020-03-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Atomic structures of anthrax toxin protective antigen channels bound to partially unfolded lethal and edema factors.
Nat Commun, 11, 2020
6UZE
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Anthrax toxin protective antigen channels bound to edema factor
分子名称: CALCIUM ION, Calmodulin-sensitive adenylate cyclase, Protective antigen
著者Hardenbrook, N.J, Liu, S, Zhou, K, Zhou, Z.H, Krantz, B.A.
登録日2019-11-15
公開日2020-03-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Atomic structures of anthrax toxin protective antigen channels bound to partially unfolded lethal and edema factors.
Nat Commun, 11, 2020
6UZD
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BU of 6uzd by Molmil
Anthrax toxin protective antigen channels bound to edema factor
分子名称: CALCIUM ION, Calmodulin-sensitive adenylate cyclase, Protective antigen
著者Hardenbrook, N.J, Liu, S, Zhou, K, Zhou, Z.H, Krantz, B.A.
登録日2019-11-14
公開日2020-03-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Atomic structures of anthrax toxin protective antigen channels bound to partially unfolded lethal and edema factors.
Nat Commun, 11, 2020
6XA2
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Structure of the tirandamycin C-bound P450 monooxygenase TamI
分子名称: (3E)-3-{(2E,4E,6R)-1-hydroxy-4-methyl-6-[(1R,3R,4S,5R)-1,4,8-trimethyl-2,9-dioxabicyclo[3.3.1]non-7-en-3-yl]hepta-2,4-dien-1-ylidene}-2H-pyrrole-2,4(3H)-dione, PROTOPORPHYRIN IX CONTAINING FE, TamI
著者Newmister, S.A, Srivastava, K.R, Espinoza, R.V, Haatveit, K.C, Khatri, Y, Martini, R.M, Garcia-Borras, M, Podust, L.M, Houk, K.N, Sherman, D.H.
登録日2020-06-03
公開日2021-06-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.
Acs Catalysis, 10, 2020
6XA3
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Structure of the ligand free P450 monooxygenase TamI
分子名称: PROTOPORPHYRIN IX CONTAINING FE, TamI
著者Newmister, S.A, Srivastava, K.R, Espinoza, R.V, Haatveit, K.C, Khatri, Y, Martini, R.M, Garcia-Borras, M, Podust, L.M, Houk, K.N, Sherman, D.H.
登録日2020-06-03
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.
Acs Catalysis, 10, 2020
4K6N
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BU of 4k6n by Molmil
Crystal structure of yeast 4-amino-4-deoxychorismate lyase
分子名称: Aminodeoxychorismate lyase, PYRIDOXAL-5'-PHOSPHATE
著者Dai, Y.-N, Chi, C.-B, Zhou, K, Cheng, W, Jiang, Y.-L, Ren, Y.-M, Chen, Y, Zhou, C.-Z.
登録日2013-04-16
公開日2013-07-10
最終更新日2013-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and catalytic mechanism of yeast 4-amino-4-deoxychorismate lyase
J.Biol.Chem., 288, 2013
5M5C
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BU of 5m5c by Molmil
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
分子名称: Calmodulin-regulated spectrin-associated protein 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Akhmanova, A, Moores, C.A, Baldus, M, Steinmetz, M.O, Topf, M, Roberts, A.J, Grant, B.J, Scarabelli, G, Joseph, A.-P, van Hooff, J.J.E, Houben, K, Hua, S, Luo, Y, Stangier, M.M, Jiang, K, Atherton, J.
登録日2016-10-21
公開日2017-10-04
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.
Nat. Struct. Mol. Biol., 24, 2017
5M50
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BU of 5m50 by Molmil
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
分子名称: Calmodulin-regulated spectrin-associated protein 3, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Akhmanova, A, Moores, C.A, Baldus, M, Steinmetz, M.O, Topf, M, Roberts, A.J, Grant, B.J, Scarabelli, G, Joseph, A.-P, van Hooff, J.J.E, Houben, K, Hua, S, Luo, Y, Stangier, M.M, Jiang, K, Atherton, J.
登録日2016-10-20
公開日2017-10-04
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.
Nat. Struct. Mol. Biol., 24, 2017
5M54
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BU of 5m54 by Molmil
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
分子名称: Calmodulin-regulated spectrin-associated protein 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Akhmanova, A, Moores, C.A, Baldus, M, Steinmetz, M.O, Topf, M, Roberts, A.J, Grant, B.J, Scarabelli, G, Joseph, A.-J, van Hooff, J.J.E, Houben, K, Hua, S, Luo, Y, Stangier, M.M, Jiang, K, Atherton, J.
登録日2016-10-20
公開日2017-10-04
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.
Nat. Struct. Mol. Biol., 24, 2017
6XAI
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BU of 6xai by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Pro)
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, 1,2-ETHANEDIOL, NzeB, ...
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.489 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6XAK
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Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Pro) and cyclo-(L-Trp-L-Trp)
分子名称: (3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione, (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, 1,2-ETHANEDIOL, ...
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.479 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
5WXZ
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Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with D-aspartate
分子名称: D-ASPARTIC ACID, McyF
著者Cao, D.D, Zhou, K, Jiang, Y.L, Zhou, C.Z.
登録日2017-01-09
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the catalysis and substrate specificity of cyanobacterial aspartate racemase McyF.
Biochem.Biophys.Res.Commun., 514, 2019
5WXY
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Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with L-aspartate
分子名称: ASPARTIC ACID, McyF
著者Cao, D.D, Zhou, K, Jiang, Y.L, Zhou, C.Z.
登録日2017-01-09
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Structural insights into the catalysis and substrate specificity of cyanobacterial aspartate racemase McyF.
Biochem.Biophys.Res.Commun., 514, 2019
6QVW
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BU of 6qvw by Molmil
Solution structure of the free FOXO1 DNA binding domain
分子名称: Forkhead box protein O1
著者Psenakova, K, Obsil, T, Veverka, V, Obsilova, V, Kohoutova, K.
登録日2019-03-05
公開日2019-09-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Forkhead Domains of FOXO Transcription Factors Differ in both Overall Conformation and Dynamics.
Cells, 8, 2019
5WXX
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Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with citrate
分子名称: CITRIC ACID, McyF
著者Cao, D.D, Zhou, K, Jiang, Y.L, Zhou, C.Z.
登録日2017-01-09
公開日2018-01-17
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural insights into the catalysis and substrate specificity of cyanobacterial aspartate racemase McyF.
Biochem.Biophys.Res.Commun., 514, 2019
5G06
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BU of 5g06 by Molmil
Cryo-EM structure of yeast cytoplasmic exosome
分子名称: EXOSOME COMPLEX COMPONENT CSL4, EXOSOME COMPLEX COMPONENT MTR3, EXOSOME COMPLEX COMPONENT RRP4, ...
著者Liu, J.J, Niu, C.Y, Wu, Y, Tan, D, Wang, Y, Ye, M.D, Liu, Y, Zhao, W.W, Zhou, K, Liu, Q.S, Dai, J.B, Yang, X.R, Dong, M.Q, Huang, N, Wang, H.W.
登録日2016-03-17
公開日2016-06-15
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryoem Structure of Yeast Cytoplasmic Exosome Complex.
Cell Res., 26, 2016
6XAL
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Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Val)
分子名称: (3S,6S)-3-[(1H-indol-3-yl)methyl]-6-(propan-2-yl)piperazine-2,5-dione, NzeB, PROTOPORPHYRIN IX CONTAINING FE
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.349 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6XAM
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Crystal structure of NzeB in complex with cyclo-(L-Trp-L-homoalanine)
分子名称: (3S,6S)-3-ethyl-6-[(1H-indol-3-yl)methyl]piperazine-2,5-dione, 1,2-ETHANEDIOL, NzeB, ...
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6XAJ
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Crystal structure of NzeB
分子名称: 1,2-ETHANEDIOL, NzeB, PROTOPORPHYRIN IX CONTAINING FE
著者Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
登録日2020-06-04
公開日2021-06-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020

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