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PDB: 58 results

8E7F
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BU of 8e7f by Molmil
Crystal structure of the autotransporter Ssp from Serratia marcescens.
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Extracellular serine protease, ...
Authors:Hor, L, Pilapitiya, A, Panjikar, S, Paxman, J.J, Heras, B.
Deposit date:2022-08-23
Release date:2023-03-08
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a subtilisin-like autotransporter passenger domain reveals insights into its cytotoxic function.
Nat Commun, 14, 2023
4IK0
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BU of 4ik0 by Molmil
Crystal structure of diaminopimelate epimerase Y268A mutant from Escherichia coli
Descriptor: Diaminopimelate epimerase, IODIDE ION
Authors:Hor, L, Dobson, R.C.J, Hutton, C.A, Perugini, M.A.
Deposit date:2012-12-24
Release date:2013-02-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dimerization of bacterial diaminopimelate epimerase is essential for catalysis
J.Biol.Chem., 288, 2013
4IJZ
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Crystal structure of diaminopimelate epimerase from Escherichia coli
Descriptor: Diaminopimelate epimerase, NITRATE ION
Authors:Hor, L, Dobson, R.C.J, Hutton, C.A, Perugini, M.A.
Deposit date:2012-12-24
Release date:2013-02-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dimerization of bacterial diaminopimelate epimerase is essential for catalysis
J.Biol.Chem., 288, 2013
5DT5
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BU of 5dt5 by Molmil
Crystal structure of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7 in space group P21
Descriptor: Beta-glucosidase, SULFATE ION
Authors:Zanphorlin, L.M, Giuseppe, P.O, Tonoli, C.C.C, Murakami, M.T.
Deposit date:2015-09-17
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7.
Sci Rep, 6, 2016
5DT7
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BU of 5dt7 by Molmil
Crystal structure of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7 in space group C2221
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Beta-glucosidase, GLYCEROL, ...
Authors:Zanphorlin, L.M, Giuseppe, P.O, Tonoli, C.C.C, Murakami, M.T.
Deposit date:2015-09-17
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7.
Sci Rep, 6, 2016
6WIU
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BU of 6wiu by Molmil
Crystal structure of a beta-glucosidase from Exiguobacterium marinum
Descriptor: Beta-glucosidase
Authors:Zanphorlin, L.M, Morais, M.A.B, Murakami, M.T.
Deposit date:2020-04-10
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.511 Å)
Cite:A rationally identified marine GH1 beta-glucosidase has distinguishing functional features for simultaneous saccharification and fermentation
Biofuels, Bioprod Bioref, 2020
6MS3
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BU of 6ms3 by Molmil
Crystal structure of the GH43 protein BlXynB mutant (K247S) from Bacillus licheniformis
Descriptor: CALCIUM ION, GLYCEROL, Glycoside Hydrolase Family 43, ...
Authors:Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
Deposit date:2018-10-16
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
6MS2
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BU of 6ms2 by Molmil
Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
Descriptor: CALCIUM ION, Glycoside Hydrolase Family 43
Authors:Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
Deposit date:2018-10-16
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
1KRQ
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BU of 1krq by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CAMPYLOBACTER JEJUNI FERRITIN
Descriptor: ferritin
Authors:Hortolan, L, Saintout, N, Granier, G, Langlois d'Estaintot, B, Manigand, C, Mizunoe, Y, Wai, S.N, Gallois, B, Precigoux, G.
Deposit date:2002-01-10
Release date:2002-02-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:STRUCTURE OF CAMPYLOBACTER JEJUNI FERRITIN AT 2.7 A RESOLUTION
To be Published
4F6Z
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BU of 4f6z by Molmil
Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-b-lactamase active site
Descriptor: Beta-lactamase, CITRATE ANION, ZINC ION
Authors:Horton, L.B, Shanker, S, Sankaran, B, Mikulski, R, Brown, N.G, Phillips, K, Lykissa, E, Prasad, B.V.V, Palzkill, T.G.
Deposit date:2012-05-15
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-beta-lactamase active site
Antimicrob.Agents Chemother., 56, 2012
4F6H
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BU of 4f6h by Molmil
Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-b-lactamase active site
Descriptor: Beta-lactamase, PHOSPHATE ION, SULFATE ION, ...
Authors:Horton, L.B, Shanker, S, Sankaran, B, Mikulski, R, Brown, N.G, Phillips, K, Lykissa, E, Prasad, B.V.V, Palzkill, T.G.
Deposit date:2012-05-14
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.744 Å)
Cite:Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-beta-lactamase active site
Antimicrob.Agents Chemother., 56, 2012
7JVE
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BU of 7jve by Molmil
Crystal structure of Salmonella enterica Typhimurium BcfH
Descriptor: 1,2-ETHANEDIOL, DsbA family protein, MAGNESIUM ION, ...
Authors:Subedi, P, Heras, B, Hor, L, Paxman, J.J.
Deposit date:2020-08-21
Release date:2021-04-21
Last modified:2021-06-23
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Salmonella enterica BcfH Is a Trimeric Thioredoxin-Like Bifunctional Enzyme with Both Thiol Oxidase and Disulfide Isomerase Activities.
Antioxid.Redox Signal., 35, 2021
7KOB
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BU of 7kob by Molmil
Crystal structure of antigen 43b from Escherichia coli CFT073
Descriptor: Antigen 43b, GLYCEROL
Authors:Martinez-Ortiz, G.C, Hor, L, Paxman, J.J, Heras, B.
Deposit date:2020-11-07
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Variation of Antigen 43 self-association modulates bacterial compacting within aggregates and biofilms.
NPJ Biofilms Microbiomes, 8, 2022
7KO9
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BU of 7ko9 by Molmil
Crystal structure of antigen 43 from uropathogenic Escherichia coli UTI89
Descriptor: AidA-I family adhesin, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Vo, J.L, Hor, L, Paxman, J.J, Heras, B.
Deposit date:2020-11-07
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Variation of Antigen 43 self-association modulates bacterial compacting within aggregates and biofilms.
NPJ Biofilms Microbiomes, 8, 2022
4GUX
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BU of 4gux by Molmil
Crystal structure of trypsin:MCoTi-II complex
Descriptor: ACETATE ION, CALCIUM ION, Cationic trypsin, ...
Authors:King, G.J, Daly, N.L, Thorstholm, L, Greenwood, K.P, Rosengren, K.J, Heras, B, Craik, D.J, Martin, J.L.
Deposit date:2012-08-30
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structural insights into the role of the cyclic backbone in a squash trypsin inhibitor
J.Biol.Chem., 288, 2013
3DCG
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BU of 3dcg by Molmil
Crystal Structure of the HIV Vif BC-box in Complex with Human ElonginB and ElonginC
Descriptor: Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, Virion infectivity factor
Authors:Stanley, B.J, Ehrlich, E.S, Short, L, Yu, Y, Xiao, Z, Yu, X.-F, Xiong, Y.
Deposit date:2008-06-03
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into the human immunodeficiency virus Vif SOCS box and its role in human E3 ubiquitin ligase assembly
J.Virol., 82, 2008
4WBA
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BU of 4wba by Molmil
Q/E mutant SA11 NSP4_CCD
Descriptor: GLYCEROL, Non-structural glycoprotein NSP4, PHOSPHATE ION
Authors:Viskovska, M, Sastri, N.P, Hyser, J.M, Tanner, M.R, Horton, L.B, Sankaran, B, Prasad, B.V.V, Estes, M.K.
Deposit date:2014-09-02
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural Plasticity of the Coiled-Coil Domain of Rotavirus NSP4.
J.Virol., 88, 2014
4PN2
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BU of 4pn2 by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMU
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BU of 4pmu by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.857 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4GSO
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BU of 4gso by Molmil
structure of Jararacussin-I
Descriptor: Thrombin-like enzyme BjussuSP-1
Authors:Ullah, A, Souza, T.C.A.B, Zanphorlin, L.M, Mariutti, R, Sanata, S.V, Murakami, M.T, Arni, R.K.
Deposit date:2012-08-28
Release date:2012-12-12
Last modified:2013-01-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Jararacussin-I: The highly negatively charged catalytic interface contributes to macromolecular selectivity in snake venom thrombin-like enzymes.
Protein Sci., 22, 2013
4PMY
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BU of 4pmy by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose
Descriptor: CALCIUM ION, GLYCEROL, Xylanase, ...
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMX
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BU of 4pmx by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri in the native form
Descriptor: CALCIUM ION, Xylanase
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.304 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMV
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BU of 4pmv by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMZ
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BU of 4pmz by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4WB4
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BU of 4wb4 by Molmil
wt SA11 NSP4_CCD
Descriptor: CALCIUM ION, Non-structural glycoprotein NSP4
Authors:Viskovska, M, Sastri, N.P, Hyser, J.M, Tanner, M.R, Horton, L.B, Sankaran, B, Prasad, B.V.V, Estes, M.K.
Deposit date:2014-09-02
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural Plasticity of the Coiled-Coil Domain of Rotavirus NSP4.
J.Virol., 88, 2014

 

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数据于2024-07-17公开中

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