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PDB: 120 results

5ZQJ
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Crystal structure of beta-xylosidase from Bacillus pumilus
Descriptor: Beta-xylosidase, GLYCEROL
Authors:Ha, N.C, Hong, S, Jo, I.
Deposit date:2018-04-19
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structure-based protein engineering of bacterial beta-xylosidase to increase the production yield of xylobiose from xylose
Biochem. Biophys. Res. Commun., 501, 2018
5ZQX
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Crystal structure of beta-xylosidase mutant (E186Q) from Bacillus pumilus
Descriptor: Beta-xylosidase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Ha, N.C, Hong, S, Jo, I.
Deposit date:2018-04-20
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based protein engineering of bacterial beta-xylosidase to increase the production yield of xylobiose from xylose
Biochem. Biophys. Res. Commun., 501, 2018
5Y9S
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BU of 5y9s by Molmil
Crystal structure of VV2_1132, a LysR family transcriptional regulator
Descriptor: BROMIDE ION, VV2_1132
Authors:Jang, Y, Hong, S, Jo, I, Ahn, J, Ha, N.C.
Deposit date:2017-08-28
Release date:2018-03-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator inVibrio vulnificus
Mol. Cells, 41, 2018
5YDW
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Full-length structure of HypT from Salmonella typhimuriuma (hypochlorite-specific LysR-type transcriptional regulator)
Descriptor: Cell density-dependent motility repressor
Authors:Jo, I, Hong, S, Ahn, J, Ha, N.C.
Deposit date:2017-09-15
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YDV
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BU of 5ydv by Molmil
Regulatory domain of HypT from Salmonella typhimurium complexed with HOCl (HOCl-bound form)
Descriptor: Cell density-dependent motility repressor, SULFATE ION, hypochlorous acid
Authors:Jo, I, Hong, S, Ahn, J, Ha, N.C.
Deposit date:2017-09-14
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YEZ
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Regulatory domain of HypT M206Q mutant from Salmonella typhimurium
Descriptor: Cell density-dependent motility repressor
Authors:Jo, I, Hong, S, Ahn, J, Ha, N.C.
Deposit date:2017-09-20
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YER
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BU of 5yer by Molmil
Regulatory domain of HypT from Salmonella typhimurium (Bromide ion-bound)
Descriptor: BROMIDE ION, Cell density-dependent motility repressor, SULFATE ION
Authors:Jo, I, Hong, S, Ahn, J, Ha, N.C.
Deposit date:2017-09-19
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YDO
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BU of 5ydo by Molmil
Regulatory domain of HypT from Salmonella typhimurium (apo-form)
Descriptor: Cell density-dependent motility repressor, SULFATE ION
Authors:Jo, I, Hong, S, Ahn, J, Ha, N.C.
Deposit date:2017-09-13
Release date:2018-11-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7CXY
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BU of 7cxy by Molmil
Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (zinc-bound form)
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
7CXX
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Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (disulfide-bonded form)
Descriptor: ACETATE ION, Carbonic anhydrase, SULFATE ION
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
7CXW
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BU of 7cxw by Molmil
Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (C116 flipped form)
Descriptor: ACETATE ION, Carbonic anhydrase
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
7DNZ
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BU of 7dnz by Molmil
Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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BU of 7dny by Molmil
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
5ZNX
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BU of 5znx by Molmil
Crystal structure of CM14-treated HlyU from Vibrio vulnificus
Descriptor: Transcriptional activator
Authors:Park, N, Kim, S, Jo, I, Ahn, J, Hong, S, Jeong, S, Baek, Y.
Deposit date:2018-04-11
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.114 Å)
Cite:Small-molecule inhibitor of HlyU attenuates virulence of Vibrio species.
Sci Rep, 9, 2019
1IE5
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BU of 1ie5 by Molmil
NMR STRUCTURE OF THE THIRD IMMUNOGLOBULIN DOMAIN FROM THE NEURAL CELL ADHESION MOLECULE.
Descriptor: NEURAL CELL ADHESION MOLECULE
Authors:Atkins, A.R, Chung, J, Deechongkit, S, Little, E.B, Edelman, G.M, Wright, P.E, Cunningham, B.A, Dyson, H.J.
Deposit date:2001-04-06
Release date:2001-08-08
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the third immunoglobulin domain of the neural cell adhesion molecule N-CAM: can solution studies define the mechanism of homophilic binding?
J.Mol.Biol., 311, 2001
6JJC
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BU of 6jjc by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) semi-empty VLP
Descriptor: CALCIUM ION, Capsid protein
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-05-01
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) semi-empty VLP
To Be Published
6JJA
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BU of 6jja by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii extra small virus (XSV) VLP
Descriptor: CALCIUM ION, Nucleocapsid protein CP17
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-07-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii extra small virus (XSV) VLP
To Be Published
6JJD
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BU of 6jjd by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) full VLP
Descriptor: CALCIUM ION, Capsid protein
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-05-01
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) full VLP
To Be Published
2KAE
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BU of 2kae by Molmil
data-driven model of MED1:DNA complex
Descriptor: 5'-D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP*DTP*DTP*DTP*DCP*DCP*DG)-3', GATA-type transcription factor, ZINC ION
Authors:Lowry, J.A, Gamsjaeger, R, Thong, S, Hung, W, Kwan, A.H, Broitman-Maduro, G, Matthews, J.M, Maduro, M, Mackay, J.P.
Deposit date:2008-11-04
Release date:2009-01-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Analysis of MED-1 Reveals Unexpected Diversity in the Mechanism of DNA Recognition by GATA-type Zinc Finger Domains.
J.Biol.Chem., 284, 2009
2XU7
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BU of 2xu7 by Molmil
Structural basis for RbAp48 binding to FOG-1
Descriptor: HISTONE-BINDING PROTEIN RBBP4, TETRAETHYLENE GLYCOL, ZINC FINGER PROTEIN ZFPM1
Authors:Lejon, S, Thong, S.Y, Murthy, A, Blobel, G.A, Mackay, J.P, Murzina, N.V, Laue, E.D.
Deposit date:2010-10-15
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights Into Association of the Nurd Complex with Fog-1 from the Crystal Structure of an Rbap48-Fog- 1 Complex.
J.Biol.Chem., 286, 2011

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