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PDB: 473 results

7YLO
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BU of 7ylo by Molmil
Conversion of indole-3-acetic acid into indole-3-aldehyde in bacteria Metabolic network of tryptophan around the indole-3-aldehyde formation
Descriptor: Dyp-type peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cheng, J, Luo, Y, Zhu, J, Tan, R, Wang, N, Lebedev, A.A.
Deposit date:2022-07-26
Release date:2023-07-05
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Conversion of indole-3-acetic acid into indole-3-aldehyde in bacteria Metabolic network of tryptophan around the indole-3-aldehyde formation
To Be Published
1D68
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BU of 1d68 by Molmil
SOLUTION STRUCTURE OF [D(GCGTATACGC)]2
Descriptor: DNA (5'-D(P*GP*CP*GP*TP*AP*TP*AP*CP*GP*C)-3')
Authors:Cheng, J.-W, Chou, S.-H, Salazar, M, Reid, B.R.
Deposit date:1992-04-15
Release date:1993-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of [d(GCGTATACGC)]2.
J.Mol.Biol., 228, 1992
4P0U
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BU of 4p0u by Molmil
YhdE E33A p4 space group
Descriptor: Maf-like protein YceF
Authors:Zheng, J, Jin, J, Wang, N, Jia, Z.
Deposit date:2014-02-23
Release date:2014-05-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:YhdE E33A p4 space group
To Be Published
4PT1
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BU of 4pt1 by Molmil
Crystal structure of Locusta migratoria odorant binding proteins lmigOBP1
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, Odorant-binding protein 1d
Authors:Zheng, J, Li, J, Chen, Z.
Deposit date:2014-03-10
Release date:2014-12-31
Last modified:2015-10-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the Locusta migratoria odorant binding protein.
Biochem.Biophys.Res.Commun., 456, 2015
4IQS
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BU of 4iqs by Molmil
RNA 8mer duplex modified with 4-Se-Uridine
Descriptor: RNA (5'-R(*GP*UP*GP*(S5)P*AP*CP*AP*C)-3')
Authors:Sheng, J, Gan, J, Soares, A, Huang, Z.
Deposit date:2013-01-13
Release date:2013-12-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights of non-canonical U*U pair and Hoogsteen interaction probed with Se atom.
Nucleic Acids Res., 41, 2013
3LCB
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BU of 3lcb by Molmil
The crystal structure of isocitrate dehydrogenase kinase/phosphatase in complex with its substrate, isocitrate dehydrogenase, from Escherichia coli.
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Isocitrate dehydrogenase [NADP], ...
Authors:Zheng, J, Jia, Z.
Deposit date:2010-01-10
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Nature, 465, 2010
3LTR
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BU of 3ltr by Molmil
5-OMe-dU containing DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3', MAGNESIUM ION
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
Deposit date:2010-02-16
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone.
Nucleic Acids Res., 40, 2012
3FRQ
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BU of 3frq by Molmil
Structure of the macrolide biosensor protein, MphR(A), with erythromcyin
Descriptor: CHLORIDE ION, ERYTHROMYCIN A, GLYCEROL, ...
Authors:Zheng, J, Sagar, V, Smolinsky, A, Bourke, C, LaRonde-LeBlanc, N, Cropp, T.A.
Deposit date:2009-01-08
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure and function of the macrolide biosensor protein, MphR(A), with and without erythromycin
J.Mol.Biol., 387, 2009
1U5W
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BU of 1u5w by Molmil
Crystal structure of hypothetical protein yjjX from Escherichia coli
Descriptor: Hypothetical UPF0244 protein yjjX, SULFATE ION
Authors:Zheng, J, Singh, V.K, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2004-07-28
Release date:2005-08-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of an ITPase/XTPase in Escherichia coli by Structural and Biochemical Analysis
Structure, 13, 2005
3MJS
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BU of 3mjs by Molmil
Structure of A-type Ketoreductases from Modular Polyketide Synthase
Descriptor: (2S)-2-hydroxybutanedioic acid, AmphB, D-MALATE, ...
Authors:Zheng, J, Taylor, C.A, Piasecki, S.K, Keatinge-Clay, A.T.
Deposit date:2010-04-13
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Functional Analysis of A-Type Ketoreductases from the Amphotericin Modular Polyketide Synthase.
Structure, 18, 2010
4F2U
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BU of 4f2u by Molmil
Structure of the N254Y/H258Y double mutant of the Phosphatidylinositol-Specific Phospholipase C from S.aureus
Descriptor: 1-phosphatidylinositol phosphodiesterase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION
Authors:Cheng, J, Goldstein, R, Stec, B, Gershenson, A, Roberts, M.F.
Deposit date:2012-05-08
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Competition between Anion Binding and Dimerization Modulates Staphylococcus aureus Phosphatidylinositol-specific Phospholipase C Enzymatic Activity.
J.Biol.Chem., 287, 2012
4F2T
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BU of 4f2t by Molmil
Modulation of S.aureus Phosphatidylinositol-Specific Phospholipase C Membrane Binding.
Descriptor: 1-phosphatidylinositol phosphodiesterase, ACETATE ION
Authors:Cheng, J, Goldstein, R, Stec, B, Gershenson, A, Roberts, M.F.
Deposit date:2012-05-08
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Competition between Anion Binding and Dimerization Modulates Staphylococcus aureus Phosphatidylinositol-specific Phospholipase C Enzymatic Activity.
J.Biol.Chem., 287, 2012
4F2B
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BU of 4f2b by Molmil
Modulation of S.Aureus Phosphatidylinositol-Specific Phospholipase C Membrane Binding
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase
Authors:Cheng, J, Goldstein, R, Stec, B, Gershenson, A, Roberts, M.F.
Deposit date:2012-05-07
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Competition between Anion Binding and Dimerization Modulates Staphylococcus aureus Phosphatidylinositol-specific Phospholipase C Enzymatic Activity.
J.Biol.Chem., 287, 2012
2QKA
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BU of 2qka by Molmil
Structural and Kinetic Study of the Differences between Human and E.coli Manganese Superoxide Dismutases
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Zheng, J, Domsic, J.F, Cabelli, D, McKenna, R, Silverman, D.N.
Deposit date:2007-07-10
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic study of differences between human and Escherichia coli manganese superoxide dismutases.
Biochemistry, 46, 2007
4J1S
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BU of 4j1s by Molmil
Crystal structure of a ketoreductase domain from the bacillaene assembly line
Descriptor: Polyketide synthase PksJ
Authors:Zheng, J, Keatinge-Clay, A.T.
Deposit date:2013-02-01
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural and functional studies of a trans-acyltransferase polyketide assembly line enzyme that catalyzes stereoselective alpha- and beta-ketoreduction.
Proteins, 82, 2014
4J1Q
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BU of 4j1q by Molmil
Crystal structure of a ketoreductase domain from the bacillaene assembly line
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase PksJ
Authors:Zheng, J, Keatinge-Clay, A.T.
Deposit date:2013-02-01
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and functional studies of a trans-acyltransferase polyketide assembly line enzyme that catalyzes stereoselective alpha- and beta-ketoreduction.
Proteins, 82, 2014
3G56
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BU of 3g56 by Molmil
Structure of the macrolide biosensor protein, MphR(A)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Regulator of macrolide 2'-phosphotransferase I
Authors:Zheng, J, Sagar, V, Smolinsky, A, Bourke, C, LaRonde-LeBlanc, N, Cropp, T.A.
Deposit date:2009-02-04
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and function of the macrolide biosensor protein, MphR(A), with and without erythromycin
J.Mol.Biol., 387, 2009
4L4X
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BU of 4l4x by Molmil
An A2-type ketoreductase from a modular polyketide synthase
Descriptor: AmphI, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zheng, J, Keatinge-Clay, A.T.
Deposit date:2013-06-10
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Studies of an A2-Type Modular Polyketide Synthase Ketoreductase Reveal Features Controlling alpha-Substituent Stereochemistry.
Acs Chem.Biol., 8, 2013
4IMP
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BU of 4imp by Molmil
The missing linker: a dimerization motif located within polyketide synthase modules
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase extender modules 3-4
Authors:Zheng, J, Keatinge-Clay, A.T.
Deposit date:2013-01-03
Release date:2013-03-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The missing linker: a dimerization motif located within polyketide synthase modules.
Acs Chem.Biol., 8, 2013
1ZYL
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BU of 1zyl by Molmil
Crystal Structure of Hypothetical Protein YihE from Escherichia coli
Descriptor: Hypothetical protein yihE
Authors:Zheng, J, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2005-06-10
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a novel prokaryotic Ser/Thr kinase and its implication in the Cpx stress response pathway.
Mol.Microbiol., 63, 2007
3EPS
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BU of 3eps by Molmil
The crystal structure of isocitrate dehydrogenase kinase/phosphatase from E. coli
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Isocitrate dehydrogenase kinase/phosphatase, ...
Authors:Zheng, J, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2008-09-29
Release date:2010-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Nature, 465, 2010
3LC6
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BU of 3lc6 by Molmil
The alternative conformation structure of isocitrate dehydrogenase kinase/phosphatase from E. Coli
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Isocitrate dehydrogenase kinase/phosphatase, ...
Authors:Zheng, J, Jia, Z.
Deposit date:2010-01-09
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Nature, 465, 2010
3IFF
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BU of 3iff by Molmil
2'-SeMe-A modified DNA decamer
Descriptor: DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3'), MAGNESIUM ION
Authors:Sheng, J, Gan, J, Salon, J, Huang, Z.
Deposit date:2009-07-24
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Selenium modification at 2'-position of adenosine for nucleic acid structure studies
To be Published
3IFI
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BU of 3ifi by Molmil
2'-SeMe-dG modified octamer DNA
Descriptor: DNA (5'-D(*GP*TP*(XUG)P*TP*AP*CP*AP*C)-3')
Authors:Sheng, J, Gan, J, Salon, J, Huang, Z.
Deposit date:2009-07-24
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Synthesis and crystal structure of 2'-se-modified guanosine containing DNA.
J.Org.Chem., 75, 2010
3MJC
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BU of 3mjc by Molmil
Structure of A-type Ketoreductases from Modular Polyketide Synthase
Descriptor: AmphB, GLYCEROL
Authors:Zheng, J, Taylor, C.A, Piasecki, S.K, Keatinge-Clay, A.T.
Deposit date:2010-04-12
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural and Functional Analysis of A-Type Ketoreductases from the Amphotericin Modular Polyketide Synthase.
Structure, 18, 2010

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