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PDB: 473 results

3IJK
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BU of 3ijk by Molmil
5-OMe modified DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Zhang, W, Hassan, A.E.A, Gan, J, Huang, Z.
Deposit date:2009-08-04
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
7VWA
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BU of 7vwa by Molmil
Helicoverpa armigera pheromone-binding protein PBP1 with Z-9-hexadecenal
Descriptor: (Z)-hexadec-9-enal, PBP1
Authors:Zheng, J, Chen, Z.
Deposit date:2021-11-10
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Ligand-Binding and -Releasing Mechanism of Helicoverpa armigera Pheromone-Binding Protein PBP1.
Int J Mol Sci, 23, 2022
7VW8
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BU of 7vw8 by Molmil
Helicoverpa armigera pheromone-binding protein PBP1 at pH 7.5
Descriptor: PBP1
Authors:Zheng, J, Chen, Z.
Deposit date:2021-11-09
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Insights into the Ligand-Binding and -Releasing Mechanism of Helicoverpa armigera Pheromone-Binding Protein PBP1.
Int J Mol Sci, 23, 2022
7VW9
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BU of 7vw9 by Molmil
Helicoverpa armigera pheromone-binding protein PBP1 at pH 5.5
Descriptor: PBP1
Authors:Zheng, J, Chen, Z.
Deposit date:2021-11-10
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Ligand-Binding and -Releasing Mechanism of Helicoverpa armigera Pheromone-Binding Protein PBP1.
Int J Mol Sci, 23, 2022
3LTU
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BU of 3ltu by Molmil
5-SeMe-dU containing DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(T5S)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
Deposit date:2010-02-16
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
3K18
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BU of 3k18 by Molmil
Tellurium modified DNA-8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Huang, Z.
Deposit date:2009-09-25
Release date:2010-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis and Structure Study of Oligonucleotides Derivatized with Tellurium Functionality
To be Published
3KQ8
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BU of 3kq8 by Molmil
5-Te-uridine derivatized DNA-8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3', MAGNESIUM ION
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Huang, Z.
Deposit date:2009-11-17
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synthesis and Structure studies of 5-Tellurium modified DNA
To be Published
3FA1
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BU of 3fa1 by Molmil
Crystal Structure of Tellurium Derivatized DNA
Descriptor: 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3'
Authors:Sheng, J, Tatsuya, M, Hassan, A.E, Huang, Z.
Deposit date:2008-11-14
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Tellurium Derivatized DNA
To be Published
5B5H
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BU of 5b5h by Molmil
Hydrophobic ice-binding site confer hyperactivity on antifreeze protein from a snow mold fungus
Descriptor: Antifreeze protein, SODIUM ION, SULFATE ION
Authors:Cheng, J, Hanada, Y, Miura, A, Tsuda, S, Kondo, H.
Deposit date:2016-05-06
Release date:2016-09-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Hydrophobic ice-binding sites confer hyperactivity of an antifreeze protein from a snow mold fungus.
Biochem.J., 473, 2016
5C56
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BU of 5c56 by Molmil
Crystal structure of USP7/HAUSP in complex with ICP0
Descriptor: Ubiquitin E3 ligase ICP0, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Cheng, J, Li, Z, Gong, R, Fang, J, Yang, Y, Sun, C, Yang, H, Xu, Y.
Deposit date:2015-06-19
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.685 Å)
Cite:Molecular mechanism for the substrate recognition of USP7.
Protein Cell, 6, 2015
3QP9
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BU of 3qp9 by Molmil
The Structure of a C2-type Ketoreductase from a Modular Polyketide Synthase
Descriptor: Type I polyketide synthase PikAII
Authors:Zheng, J, Keatinge-Clay, A.T.
Deposit date:2011-02-11
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and functional analysis of c2-type ketoreductases from modular polyketide synthases.
J.Mol.Biol., 410, 2011
7XNY
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BU of 7xny by Molmil
High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Cheng, J, Beckmann, R.
Deposit date:2022-04-30
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia.
Cancer Discov, 13, 2023
7XNX
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BU of 7xnx by Molmil
High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Cheng, J, Beckmann, R.
Deposit date:2022-04-30
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia.
Cancer Discov, 13, 2023
4MSR
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BU of 4msr by Molmil
RNA 10mer duplex with six 2'-5'-linkages
Descriptor: RNA 10mer duplex with six 2'-5'-linkages, STRONTIUM ION
Authors:Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
Deposit date:2013-09-18
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MS9
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BU of 4ms9 by Molmil
Native RNA-10mer Structure: ccggcgccgg
Descriptor: Native RNA duplex 10mer, STRONTIUM ION
Authors:Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
Deposit date:2013-09-18
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MSB
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BU of 4msb by Molmil
RNA 10mer duplex with two 2'-5'-linkages
Descriptor: RNA 10mer duplex with two 2'-5'-linkages, STRONTIUM ION
Authors:Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
Deposit date:2013-09-18
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
7XR8
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BU of 7xr8 by Molmil
Structure of the S8 family protease A4095
Descriptor: Major intracellular serine protease
Authors:Cheng, J.H, Cao, H.Y, Wang, P.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the S8 family protease A4095
To Be Published
7CTG
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BU of 7ctg by Molmil
Human Origin Recognition Complex, ORC1-5 State I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Origin recognition complex subunit 1, Origin recognition complex subunit 2, ...
Authors:Cheng, J, Li, N, Wang, X, Hu, J, Zhai, Y, Gao, N.
Deposit date:2020-08-18
Release date:2021-01-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structural insight into the assembly and conformational activation of human origin recognition complex.
Cell Discov, 6, 2020
7CTE
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BU of 7cte by Molmil
Human Origin Recognition Complex, ORC2-5
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Origin recognition complex subunit 2, Origin recognition complex subunit 3, ...
Authors:Cheng, J, Li, N, Wang, X, Hu, J, Zhai, Y, Gao, N.
Deposit date:2020-08-18
Release date:2021-01-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insight into the assembly and conformational activation of human origin recognition complex.
Cell Discov, 6, 2020
7CTF
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BU of 7ctf by Molmil
Human origin recognition complex 1-5 State II
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Origin recognition complex subunit 1, Origin recognition complex subunit 2, ...
Authors:Cheng, J, Li, N, Wang, X, Hu, J, Zhai, Y, Gao, N.
Deposit date:2020-08-18
Release date:2021-01-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural insight into the assembly and conformational activation of human origin recognition complex.
Cell Discov, 6, 2020
4IQS
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BU of 4iqs by Molmil
RNA 8mer duplex modified with 4-Se-Uridine
Descriptor: RNA (5'-R(*GP*UP*GP*(S5)P*AP*CP*AP*C)-3')
Authors:Sheng, J, Gan, J, Soares, A, Huang, Z.
Deposit date:2013-01-13
Release date:2013-12-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights of non-canonical U*U pair and Hoogsteen interaction probed with Se atom.
Nucleic Acids Res., 41, 2013
7V3U
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BU of 7v3u by Molmil
Cryo-EM structure of MCM double hexamer with structured Mcm4-NSD
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ...
Authors:Cheng, J, Li, N, Huo, Y, Dang, S, Tye, B, Gao, N, Zhai, Y.
Deposit date:2021-08-11
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural Insight into the MCM double hexamer activation by Dbf4-Cdc7 kinase.
Nat Commun, 13, 2022
7V3V
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BU of 7v3v by Molmil
Cryo-EM structure of MCM double hexamer bound with DDK in State I
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 7, DDK kinase regulatory subunit DBF4, ...
Authors:Cheng, J, Li, N, Huo, Y, Dang, S, Tye, B, Gao, N, Zhai, Y.
Deposit date:2021-08-11
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural Insight into the MCM double hexamer activation by Dbf4-Cdc7 kinase.
Nat Commun, 13, 2022
7WTO
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BU of 7wto by Molmil
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (without Rps2)
Descriptor: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ...
Authors:Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R.
Deposit date:2022-02-05
Release date:2022-10-19
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The nucleoplasmic phase of pre-40S formation prior to nuclear export.
Nucleic Acids Res., 50, 2022
7WTN
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BU of 7wtn by Molmil
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2)
Descriptor: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ...
Authors:Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R.
Deposit date:2022-02-05
Release date:2022-10-19
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The nucleoplasmic phase of pre-40S formation prior to nuclear export.
Nucleic Acids Res., 50, 2022

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