Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 30 件

7B8S
DownloadVisualize
BU of 7b8s by Molmil
Fusidic acid bound structure of bacterial efflux pump.
分子名称: DARPin, FUSIDIC ACID, Multidrug efflux pump subunit AcrB,Multidrug efflux pump subunit AcrB
著者Wilhelm, J, Sjuts, H, Pos, K.M.
登録日2020-12-13
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional analysis of the promiscuous AcrB and AdeB efflux pumps suggests different drug binding mechanisms.
Nat Commun, 12, 2021
7B8T
DownloadVisualize
BU of 7b8t by Molmil
Levofloxacin bound structure of bacterial efflux pump.
分子名称: (3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid, DARPin, Multidrug efflux pump subunit AcrB,Multidrug efflux pump subunit AcrB
著者Wilhelm, J, Sjuts, H, Pos, K.M.
登録日2020-12-13
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional analysis of the promiscuous AcrB and AdeB efflux pumps suggests different drug binding mechanisms.
Nat Commun, 12, 2021
7B8R
DownloadVisualize
BU of 7b8r by Molmil
Doxycycline bound structure of bacterial efflux pump.
分子名称: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, DARPin, DI(HYDROXYETHYL)ETHER, ...
著者Wilhelm, J, Sjuts, H, Pos, K.M.
登録日2020-12-13
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional analysis of the promiscuous AcrB and AdeB efflux pumps suggests different drug binding mechanisms.
Nat Commun, 12, 2021
6SV3
DownloadVisualize
BU of 6sv3 by Molmil
Structure of coproheme-LmCpfC
分子名称: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Ferrochelatase, GLYCEROL
著者Hofbauer, S, Helm, J, Djinovic-Carugo, K, Furtmueller, P.G.
登録日2019-09-17
公開日2019-12-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.64000869 Å)
主引用文献Crystal structures and calorimetry reveal catalytically relevant binding mode of coproporphyrin and coproheme in coproporphyrin ferrochelatase.
Febs J., 287, 2020
6RWV
DownloadVisualize
BU of 6rwv by Molmil
Structure of apo-LmCpfC
分子名称: Ferrochelatase, GLYCEROL, PHOSPHATE ION, ...
著者Hofbauer, S, Helm, J, Djinovic-Carugo, K, Furtmueller, P.G.
登録日2019-06-06
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6386379 Å)
主引用文献Crystal structures and calorimetry reveal catalytically relevant binding mode of coproporphyrin and coproheme in coproporphyrin ferrochelatase.
Febs J., 287, 2020
4AIW
DownloadVisualize
BU of 4aiw by Molmil
GAPR-1 with bound inositol hexakisphosphate
分子名称: GOLGI-ASSOCIATED PLANT PATHOGENESIS-RELATED PROTEIN 1, INOSITOL HEXAKISPHOSPHATE
著者Schouten, A, Gros, P, Helms, J.B.
登録日2012-02-15
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Interaction of Gapr-1 with Lipid Bilayers is Regulated by Alternative Homodimerization.
Biochim.Biophys.Acta, 1818, 2012
1SMB
DownloadVisualize
BU of 1smb by Molmil
Crystal Structure of Golgi-Associated PR-1 protein
分子名称: 17kD fetal brain protein
著者Serrano, R.L, Kuhn, A, Hendricks, A, Helms, J.B, Sinning, I, Groves, M.R.
登録日2004-03-08
公開日2004-09-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural analysis of the human Golgi-associated plant pathogenesis related protein GAPR-1 implicates dimerization as a regulatory mechanism
J.Mol.Biol., 339, 2004
1Z9C
DownloadVisualize
BU of 1z9c by Molmil
Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
分子名称: DNA (29-MER), Organic hydroperoxide resistance transcriptional regulator
著者Hong, M, Fuangthong, M, Helmann, J.D, Brennan, R.G.
登録日2005-04-01
公開日2005-10-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family.
Mol.Cell, 20, 2005
2K2G
DownloadVisualize
BU of 2k2g by Molmil
Solution structure of the wild-type catalytic domain of human matrix metalloproteinase 12 (MMP-12) in complex with a tight-binding inhibitor
分子名称: Macrophage metalloelastase, N-(dibenzo[b,d]thiophen-3-ylsulfonyl)-L-valine, ZINC ION
著者Markus, M.A, Dwyer, B, Wolfrom, S, Li, J, Li, W, Malakian, K, Wilhelm, J, Tsao, D.H.H.
登録日2008-04-01
公開日2008-05-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of wild-type human matrix metalloproteinase 12 (MMP-12) in complex with a tight-binding inhibitor.
J.Biomol.Nmr, 41, 2008
4MRO
DownloadVisualize
BU of 4mro by Molmil
Human GKRP bound to AMG-5980 and S6P
分子名称: 2-(4-{4-[(6-aminopyridin-3-yl)sulfonyl]piperazin-1-yl}phenyl)-1,1,1,3,3,3-hexafluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者St Jean, D.J, Ashton, K.S, Bartberger, M.D, Chen, J, Chmait, S, Cupples, R, Galbreath, E, Helmering, J, Jordan, S.R, Liu, L, Kunz, K, Michelsen, K, Nishimura, N, Pennington, L.D, Poon, S.F, Sivits, G, Stec, M.M, Tamayo, N, Van, G, Yang, K, Norman, M.H, Fotsch, C, LLoyd, D.J, Hale, C.
登録日2013-09-17
公開日2014-05-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Small molecule disruptors of the glucokinase-glucokinase regulatory protein interaction: 2. Leveraging structure-based drug design to identify analogues with improved pharmacokinetic profiles.
J.Med.Chem., 57, 2014
4MSU
DownloadVisualize
BU of 4msu by Molmil
Human GKRP bound to AMG-6861 and Sorbitol-6-phosphate
分子名称: 1,1,1,3,3,3-hexafluoro-2-{4-[4-(thiophen-2-ylsulfonyl)piperazin-1-yl]phenyl}propan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者Ashton, K.S, Andrews, K.L, Bryan, M.C, Chen, J, Chen, K, Chen, M, Chmait, S, Croghan, M, Cupples, R, Fotsch, C, Helmering, J, Jordan, S.R, Kurzeja, R.J, Michelsen, K, Pennington, L.D, Poon, S.F, Sivits, G, Van, G, Vonderfecht, S.L, Wahl, R.C, Zhang, J, Lloyd, D.J, Hale, C, St Jean, D.J.
登録日2013-09-18
公開日2014-03-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Small Molecule Disruptors of the Glucokinase-Glucokinase Regulatory Protein Interaction: 1. Discovery of a Novel Tool Compound for in Vivo Proof-of-Concept.
J.Med.Chem., 57, 2014
4MQU
DownloadVisualize
BU of 4mqu by Molmil
Human GKRP complexed to AMG-3969 and S6P
分子名称: 2-{4-[(2S)-4-[(6-aminopyridin-3-yl)sulfonyl]-2-(prop-1-yn-1-yl)piperazin-1-yl]phenyl}-1,1,1,3,3,3-hexafluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者St Jean, D.J, Ashton, K.S, Bartberger, M.D, Chen, J, Chmait, S, Cupples, R, Galbreath, E, Helmering, J, Jordan, S.R, Liu, L.
登録日2013-09-16
公開日2014-05-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Small molecule disruptors of the glucokinase-glucokinase regulatory protein interaction: 2. Leveraging structure-based drug design to identify analogues with improved pharmacokinetic profiles.
J.Med.Chem., 57, 2014
1IJZ
DownloadVisualize
BU of 1ijz by Molmil
Solution Structure of Human IL-13
分子名称: INTERLEUKIN-13
著者Moy, F.J, Diblasio, E, Wilhelm, J, Powers, R.
登録日2001-05-01
公開日2002-05-01
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of human IL-13 and implication for receptor binding.
J.Mol.Biol., 310, 2001
1IK0
DownloadVisualize
BU of 1ik0 by Molmil
Solution Structure of Human IL-13
分子名称: INTERLEUKIN-13
著者Moy, F.J, Diblasio, E, Wilhelm, J, Powers, R.
登録日2001-05-01
公開日2002-05-01
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of human IL-13 and implication for receptor binding.
J.Mol.Biol., 310, 2001
3K1K
DownloadVisualize
BU of 3k1k by Molmil
Green fluorescent protein bound to enhancer nanobody
分子名称: Enhancer, Green Fluorescent Protein
著者Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
登録日2009-09-28
公開日2009-12-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
2EV0
DownloadVisualize
BU of 2ev0 by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to cadmium
分子名称: CADMIUM ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-10-30
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2EV5
DownloadVisualize
BU of 2ev5 by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to calcium
分子名称: CALCIUM ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-10-31
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2F5C
DownloadVisualize
BU of 2f5c by Molmil
Bacillus subtilis Manganese transport regulator (MNTR) bound to manganese, hexagonal crystal form
分子名称: MANGANESE (II) ION, SULFATE ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-11-25
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2F5F
DownloadVisualize
BU of 2f5f by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to manganese, AC conformation, pH 8.5
分子名称: MANGANESE (II) ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-11-25
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2F5D
DownloadVisualize
BU of 2f5d by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to manganese, AC conformation, pH 6.5
分子名称: MANGANESE (II) ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-11-25
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2EV6
DownloadVisualize
BU of 2ev6 by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to zinc
分子名称: CITRATE ANION, GLYCEROL, Transcriptional regulator mntR, ...
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-10-31
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
2F5E
DownloadVisualize
BU of 2f5e by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to manganese, AB conformation, pH 6.5
分子名称: MANGANESE (II) ION, Transcriptional regulator mntR
著者Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
登録日2005-11-25
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
1Z91
DownloadVisualize
BU of 1z91 by Molmil
x-ray crystal structure of apo-OhrRC15S in reduced form: MarR family protein
分子名称: Organic hydroperoxide resistance transcriptional regulator
著者Hong, M, Fuangthong, M, Helmann, J.D, Brennan, R.G.
登録日2005-03-31
公開日2005-10-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family.
Mol.Cell, 20, 2005
3G9A
DownloadVisualize
BU of 3g9a by Molmil
Green fluorescent protein bound to minimizer nanobody
分子名称: Green fluorescent protein, Minimizer
著者Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
登録日2009-02-13
公開日2009-12-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.614 Å)
主引用文献Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
2XV6
DownloadVisualize
BU of 2xv6 by Molmil
Crystal structure of the HIV-1 capsid protein C-terminal domain (146- 220) in complex with a camelid VHH.
分子名称: CAMELID VHH 9, CAPSID PROTEIN P24
著者Igonet, S, Vaney, M.C, Bartonova, V, Helma, J, Rothbauer, U, Leonhardt, H, Stura, E, Krausslich, H.-G, Rey, F.A.
登録日2010-10-22
公開日2011-10-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Targeting HIV-1 Virion Formation with Nanobodies -Implications for the Design of Assembly Inhibitors
To be Published

 

12>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon