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PDB: 37 件
3C6Q
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BU of 3c6q by Molmil
Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
分子名称: Sugar ABC transporter, periplasmic sugar-binding protein, beta-D-xylopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2008-02-05
公開日2008-02-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Open to closed transition of a thermophilic glucose binding protein
To be Published
8TG1
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BU of 8tg1 by Molmil
Caldicellulosiruptor saccharolyticus periplasmic urea-binding protein
分子名称: BROMIDE ION, Extracellular ligand-binding receptor, UREA
著者Allert, M.J, Kumar, S, Wang, Y, Beese, L.S, Hellinga, H.W.
登録日2023-07-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure-based functional analysis reveals multiple roles and widespread use of urea-binding proteins in nitrogen metabolism
To Be Published
3I5O
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BU of 3i5o by Molmil
The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellopentaose
分子名称: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2009-07-06
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein Fold.
J.Biol.Chem., 284, 2009
8FXT
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BU of 8fxt by Molmil
Escherichia coli periplasmic Glucose-Binding Protein glucose complex: Acrylodan conjugate attached at W183C
分子名称: 1-[6-(dimethylamino)naphthalen-2-yl]propan-1-one, CALCIUM ION, D-galactose/methyl-galactoside binding periplasmic protein MglB, ...
著者Allert, M.J, Kumar, S, Wang, Y, Beese, L.S, Hellinga, H.W.
登録日2023-01-25
公開日2023-08-30
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Chromophore carbonyl twisting in fluorescent biosensors encodes direct readout of protein conformations with multicolor switching.
Commun Chem, 6, 2023
8FXU
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BU of 8fxu by Molmil
Thermoanaerobacter thermosaccharolyticum periplasmic Glucose-Binding Protein glucose complex: Badan conjugate attached at F17C
分子名称: 2-bromo-1-[6-(dimethylamino)naphthalen-2-yl]ethan-1-one, CALCIUM ION, CHLORIDE ION, ...
著者Allert, M.J, Kumar, S, Beese, L.S, Hellinga, H.W.
登録日2023-01-25
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Chromophore carbonyl twisting in fluorescent biosensors encodes direct readout of protein conformations with multicolor switching.
Commun Chem, 6, 2023
2O7I
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BU of 2o7i by Molmil
The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellobiose
分子名称: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-12-11
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein Fold.
J.Biol.Chem., 284, 2009
2B3B
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BU of 2b3b by Molmil
Thermus thermophilus Glucose/Galactose Binding Protein With Bound Glucose
分子名称: alpha-D-glucopyranose, beta-D-glucopyranose, glucose-binding protein
著者Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
登録日2005-09-20
公開日2006-07-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
2B3F
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Thermus thermophilus Glucose/Galactose Binding Protein Bound With Galactose
分子名称: beta-D-galactopyranose, glucose-binding protein
著者Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
登録日2005-09-20
公開日2006-07-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
3QEB
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BU of 3qeb by Molmil
Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), Exonuclease 1, ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
3QE9
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BU of 3qe9 by Molmil
Crystal structure of human exonuclease 1 Exo1 (D173A) in complex with DNA (complex I)
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
3QEA
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BU of 3qea by Molmil
Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA (complex II)
分子名称: BARIUM ION, DNA (5'-D(P*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
著者Orans, J, McSweeney, E.A, Iyer, R.R, Hast, M.A, Hellinga, H.W, Modrich, P, Beese, L.S.
登録日2011-01-20
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.
Cell(Cambridge,Mass.), 145, 2011
2GX6
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BU of 2gx6 by Molmil
Rational stabilization of E. coli ribose binding protein
分子名称: D-ribose-binding periplasmic protein, beta-D-ribopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-05-08
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Rational stabilization of E. coli ribose binding protein
To be Published
2HPG
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BU of 2hpg by Molmil
The crystal structure of a thermophilic TRAP periplasmic binding protein
分子名称: ABC transporter, periplasmic substrate-binding protein
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-07-17
公開日2007-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of a periplasmic binding protein in the tripartite ATP-independent transporter family reveals a tetrameric assembly that may have a role in ligand transport.
J.Biol.Chem., 283, 2008
2HPH
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BU of 2hph by Molmil
High resolution structure of E. coli glucose/galactose binding protein bound with glucose
分子名称: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-07-17
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献High resolution structure of E. coli glucose/galactose binding protein bound with glucose
To be Published
2FN9
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BU of 2fn9 by Molmil
Thermotoga maritima Ribose Binding Protein Unliganded Form
分子名称: ribose ABC transporter, periplasmic ribose-binding protein
著者Cuneo, M.J, Changela, A, Tian, Y, Beese, L.S, Hellinga, H.W.
登録日2006-01-10
公開日2007-01-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Ligand-induced conformational changes in a thermophilic ribose-binding protein.
Bmc Struct.Biol., 8, 2008
2IPM
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BU of 2ipm by Molmil
Crystal structure of a disulfide mutant glucose binding protein
分子名称: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-10-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2IPN
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BU of 2ipn by Molmil
Crystal structure of a disulfide mutant glucose binding protein
分子名称: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-10-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2GH9
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Thermus thermophilus maltotriose binding protein bound with maltotriose
分子名称: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose/maltodextrin-binding protein
著者Cuneo, M.J, Changela, A, Beese, L.S, Hellinga, H.W.
登録日2006-03-27
公開日2007-02-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural adaptations that modulate monosaccharide, disaccharide, and trisaccharide specificities in periplasmic maltose-binding proteins.
J.Mol.Biol., 389, 2009
2GHB
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BU of 2ghb by Molmil
Thermotoga maritima maltotriose binding protein, ligand free form
分子名称: maltose ABC transporter, periplasmic maltose-binding protein
著者Cuneo, M.J, Changela, A, Hocker, B, Beese, L.S, Hellinga, H.W.
登録日2006-03-27
公開日2007-02-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献T. maritima maltotriose binding protein open form
To be Published
2IOY
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BU of 2ioy by Molmil
Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein
分子名称: Periplasmic sugar-binding protein, beta-D-ribopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-10-11
公開日2007-03-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog.
Bmc Struct.Biol., 8, 2008
2IPL
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BU of 2ipl by Molmil
Crystal structure of a disulfide mutant glucose binding protein
分子名称: CALCIUM ION, D-galactose-binding periplasmic protein, beta-D-glucopyranose
著者Cuneo, M.J, Hellinga, H.W.
登録日2006-10-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The free energy cost of domain reorganization in E. coli glucose binding protein
To be Published
2GHA
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BU of 2gha by Molmil
Thermotoga maritima maltotriose binding protein bound with maltotriose
分子名称: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose ABC transporter, periplasmic maltose-binding protein
著者Cuneo, M.J, Changela, A, Hocker, B, Beese, L.S, Hellinga, H.W.
登録日2006-03-27
公開日2007-02-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献T. maritima maltotriose binding protein
To be Published
3SRY
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BU of 3sry by Molmil
Engineered high-affinity halide-binding protein derived from YFP: halide-free
分子名称: Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-07
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.159 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
3SVB
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BU of 3svb by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: fluoride complex
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-12
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
3SST
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BU of 3sst by Molmil
Engineered low-affinity halide-binding protein derived from YFP: chloride complex
分子名称: CHLORIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.403 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published

 

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件を2024-08-07に公開中

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