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PDB: 261 results

5W08
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A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2017-05-30
Release date:2018-02-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Memory B Cells that Cross-React with Group 1 and Group 2 Influenza A Viruses Are Abundant in Adult Human Repertoires.
Immunity, 48, 2018
5A22
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Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy
Descriptor: VESICULAR STOMATITIS VIRUS L POLYMERASE, ZINC ION
Authors:Liang, B, Li, Z, Jenni, S, Rameh, A.A, Morin, B.M, Grant, T, Grigorieff, N, Harrison, S.C, Whelan, S.P.J.
Deposit date:2015-05-06
Release date:2015-08-19
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the L Protein of Vesicular Stomatitis Virus from Electron Cryomicroscopy.
Cell(Cambridge,Mass.), 162, 2015
2XX8
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Crystal structure of N,N-dimethyl-4-(3-(trifluoromethyl)-4,5,6,7- tetrahydro-1H-indazol-1-yl)benzamide in complex with the ligand binding domain of the Rat GluA2 receptor and glutamate at 2.2A resolution.
Descriptor: GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, N,N-DIMETHYL-4-[3-(TRIFLUOROMETHYL)-4,5,6,7-TETRAHYDRO-1H-INDAZOL-1-YL]BENZAMIDE, ...
Authors:Ward, S.E, Harries, M, Aldegheri, L, Austin, N.E, Ballantine, S, Ballini, E, Bradley, D.M, Bax, B.D, Clarke, B.P, Harris, A.J, Harrison, S.A, Melarange, R.A, Mookherjee, C, Mosley, J, DalNegro, G, Oliosi, B, Smith, K.J, Thewlis, K.M, Woollard, P.M, Yusaf, S.P.
Deposit date:2010-11-09
Release date:2011-04-27
Last modified:2011-09-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Integration of Lead Optimization with Crystallography for a Membrane-Bound Ion Channel Target: Discovery of a New Class of Ampa Receptor Positive Allosteric Modulators.
J.Med.Chem., 54, 2011
6WXE
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Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
2XXI
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BU of 2xxi by Molmil
Crystal structure of 1-((4-(3-(trifluoromethyl)-6,7-dihydropyrano(4,3- c(pyrazol-1(4H)-yl)phenyl)methyl)-2-pyrrolidinone in complex with the ligand binding domain of the Rat GluA2 receptor and glutamate at 1.6A resolution.
Descriptor: 1-({4-[3-(TRIFLUOROMETHYL)-6,7-DIHYDROPYRANO[4,3-C]PYRAZOL-1(4H)-YL]PHENYL}METHYL)-2-PYRROLIDINONE, GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, ...
Authors:Ward, S.E, Harries, M, Aldegheri, L, Austin, N.E, Ballantine, S, Ballini, E, Bradley, D.M, Bax, B.D, Clarke, B.P, Harris, A.J, Harrison, S.A, Melarange, R.A, Mookherjee, C, Mosley, J, DalNegro, G, Oliosi, B, Smith, K.J, Thewlis, K.M, Woollard, P.M, Yusaf, S.P.
Deposit date:2010-11-10
Release date:2011-04-06
Last modified:2011-09-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Integration of Lead Optimization with Crystallography for a Membrane-Bound Ion Channel Target: Discovery of a New Class of Ampa Receptor Positive Allosteric Modulators.
J.Med.Chem., 54, 2011
6WUC
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The yeast Ctf3 complex with Cnn1-Wip1
Descriptor: Inner kinetochore subunit CNN1, Inner kinetochore subunit CTF3, Inner kinetochore subunit MCM16, ...
Authors:Hinshaw, S.M, Harrison, S.C.
Deposit date:2020-05-04
Release date:2020-06-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:The Structural Basis for Kinetochore Stabilization by Cnn1/CENP-T.
Curr.Biol., 30, 2020
6XCJ
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Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH650 Fab Heavy Chain, DH650 Fab Light Chain, ...
Authors:Raymond, D.D, Chug, H, Harrison, S.C.
Deposit date:2020-06-08
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.
Science, 371, 2021
3ZXA
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Structure and Assembly of Turnip Crinkle Virus I. X-ray Crystallographic Structure Analysis at 3.2 A Resolution
Descriptor: CAPSID PROTEIN
Authors:Hogle, J.M, Maeda, A, Harrison, S.C.
Deposit date:2011-08-08
Release date:2012-02-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Assembly of Turnip Crinkle Virus. I. X-Ray Crystallographic Structure Analysis at 3.2 A Resolution.
J.Mol.Biol., 191, 1986
6Q0O
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human antibody H2227 lineage 652 in complex with influenza hemagglutinin head domain of A/Solomon Islands/3/2006(H1N1)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2019-08-02
Release date:2019-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Affinity maturation in a human humoral response to influenza hemagglutinin.
Proc.Natl.Acad.Sci.USA, 2019
6U1X
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Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor (3.0 A resolution)
Descriptor: Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION
Authors:Jenni, S, Bloyet, L.M, Dias-Avalos, R, Liang, B, Wheelman, S.P.J, Grigorieff, N, Harrison, S.C.
Deposit date:2019-08-17
Release date:2020-01-22
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the Vesicular Stomatitis Virus L Protein in Complex with Its Phosphoprotein Cofactor.
Cell Rep, 30, 2020
6V05
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BU of 6v05 by Molmil
Cryo-EM structure of a substrate-engaged Bam complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Tomasek, D, Rawson, S, Lee, J, Wzorek, J.S, Harrison, S.C, Li, Z, Kahne, D.
Deposit date:2019-11-18
Release date:2020-06-10
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of a nascent membrane protein as it folds on the BAM complex.
Nature, 583, 2020
5F6I
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BU of 5f6i by Molmil
Crystal Structure of Tier 2 Neutralizing Antibody DH428 from a Rhesus Macaque
Descriptor: DH428 Antibody Heavy Chain, DH428 Antibody Light Chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2015-12-06
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Constraints of Vaccine-Induced Tier-2 Autologous HIV Neutralizing Antibodies Targeting the Receptor-Binding Site.
Cell Rep, 14, 2016
1BGW
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BU of 1bgw by Molmil
TOPOISOMERASE RESIDUES 410-1202,
Descriptor: TOPOISOMERASE
Authors:Berger, J.M, Gamblin, S.J, Harrison, S.C, Wang, J.C.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and mechanism of DNA topoisomerase II.
Nature, 379, 1996
5F6H
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BU of 5f6h by Molmil
Crystal Structure of Tier 2 Neutralizing Antibody DH427 from a Rhesus Macaque
Descriptor: DH427 Antibody Heavy Chain, DH427 Antibody Light Chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2015-12-06
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural Constraints of Vaccine-Induced Tier-2 Autologous HIV Neutralizing Antibodies Targeting the Receptor-Binding Site.
Cell Rep, 14, 2016
5F6J
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BU of 5f6j by Molmil
Crystal Structure of Tier 2 Neutralizing Antibody DH427 from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Descriptor: DH427 Antibody Heavy Chain, DH427 Antibody Light Chain, ENVELOPE GLYCOPROTEIN GP120 of HIV-1 clade C
Authors:Fera, D, Harrison, S.C.
Deposit date:2015-12-06
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (6.63 Å)
Cite:Structural Constraints of Vaccine-Induced Tier-2 Autologous HIV Neutralizing Antibodies Targeting the Receptor-Binding Site.
Cell Rep, 14, 2016
6UEB
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BU of 6ueb by Molmil
Structure of Rabies SAD-B19 L-P complex from cryo-EM
Descriptor: Large structural protein, Phosphoprotein,Phosphoprotein, ZINC ION
Authors:Horwitz, J.A, Harrison, S.C.
Deposit date:2019-09-20
Release date:2020-02-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a rabies virus polymerase complex from electron cryo-microscopy.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XPX
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BU of 6xpx by Molmil
Human antibody S1V2-51 in complex with the influenza hemagglutinin head domain of A/Aichi/2/1968 (X-31)(H3N2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BICINE, GLYCEROL, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2020-07-09
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:A Prevalent Focused Human Antibody Response to the Influenza Virus Hemagglutinin Head Interface.
Mbio, 12, 2021
6XPO
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BU of 6xpo by Molmil
Influenza hemagglutinin A/Bangkok/01/1979(H3N2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2020-07-08
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Prevalent Focused Human Antibody Response to the Influenza Virus Hemagglutinin Head Interface.
Mbio, 12, 2021
5EN2
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BU of 5en2 by Molmil
Molecular basis for antibody-mediated neutralization of New World hemorrhagic fever mammarenaviruses
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Mahmutovic, S, Clark, L, Levis, S, Briggiler, A, Enria, D, Harrison, S.C, Abraham, J.
Deposit date:2015-11-09
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:Molecular Basis for Antibody-Mediated Neutralization of New World Hemorrhagic Fever Mammarenaviruses.
Cell Host Microbe, 18, 2015
4YK4
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BU of 4yk4 by Molmil
Human antibody 641 I-9 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 641 I-9 VHCH antibody, 641 I-9 VLCL antibody, ...
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2015-03-03
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Viral receptor-binding site antibodies with diverse germline origins.
Cell, 161, 2015
3IYV
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BU of 3iyv by Molmil
Clathrin D6 coat as full-length Triskelions
Descriptor: Clathrin heavy chain, Clathrin light chain A
Authors:Johnson, G.T, Fotin, A, Cheng, Y, Sliz, P, Grigorieff, N, Harrison, S.C, Kirchhausen, T, Walz, T.
Deposit date:2010-06-17
Release date:2010-07-21
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Molecular model for a complete clathrin lattice from electron cryomicroscopy.
Nature, 432, 2004
6WXF
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BU of 6wxf by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Intermediate conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
6WXG
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BU of 6wxg by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Reversed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
4YJZ
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Human antibody H2526 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, scFv H2526
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2015-03-03
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Viral receptor-binding site antibodies with diverse germline origins.
Cell, 161, 2015
7KQH
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BU of 7kqh by Molmil
Antibodies that engage the hemagglutinin receptor-binding site of influenza B viruses
Descriptor: 2365 Fab heavy chain, 2365 Fab light chain, Hemagglutinin, ...
Authors:Bajic, G, Harrison, S.C.
Deposit date:2020-11-16
Release date:2020-12-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Antibodies That Engage the Hemagglutinin Receptor-Binding Site of Influenza B Viruses.
Acs Infect Dis., 7, 2021

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