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PDB: 524 件

8WQH
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cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
分子名称: Coiled-coil domain-containing protein 89, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
著者Chen, X, Zhang, K, Xu, C.
登録日2023-10-11
公開日2024-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8WQE
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Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 1)
分子名称: Cullin-2, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ...
著者Chen, X, Zhang, K, Xu, C.
登録日2023-10-11
公開日2024-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8WQA
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Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
分子名称: Coiled-coil domain-containing protein 89, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
著者Chen, X, Zhang, K, Xu, C.
登録日2023-10-11
公開日2024-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
4Y9L
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Crystal Structure of Caenorhabditis elegans ACDH-11
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b
著者Li, Z.J, Zhai, Y.J, Zhang, K, Sun, F.
登録日2015-02-17
公開日2015-06-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
3F7O
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BU of 3f7o by Molmil
Crystal structure of Cuticle-Degrading Protease from Paecilomyces lilacinus (PL646)
分子名称: (MSU)(ALA)(ALA)(PRO)(VAL), CALCIUM ION, Serine protease
著者Liang, L, Lou, Z, Meng, Z, Rao, Z, Zhang, K.
登録日2008-11-10
公開日2009-11-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structures of two cuticle-degrading proteases from nematophagous fungi and their contribution to infection against nematodes.
Faseb J., 24, 2010
6A40
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complex structure of Alginate lyase AlyF-OU02 with G4
分子名称: alginate lyase AlyF-OU02, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
登録日2018-06-18
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
5CHB
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BU of 5chb by Molmil
Crystal structure of nvPizza2-S16H58 coordinating a CdCl2 nanocrystal
分子名称: CADMIUM ION, CHLORIDE ION, SULFATE ION, ...
著者Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
登録日2015-07-10
公開日2015-07-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein
Angew.Chem.Int.Ed.Engl., 54, 2015
5XG5
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BU of 5xg5 by Molmil
Crystal structure of Mitsuba-1 with bound NAcGal
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MITSUBA-1
著者Terada, D, Voet, A.R.D, Kamata, K, Zhang, K.Y.J, Tame, J.R.H.
登録日2017-04-12
公開日2017-07-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.
Sci Rep, 7, 2017
8JHK
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BU of 8jhk by Molmil
Cryo-EM structure of the DOCK5/ELMO1 complex, focused on one protomer
分子名称: Dedicator of cytokinesis protein 5, Engulfment and cell motility protein 1
著者Kukimoto-Niino, M, Katsura, K, Ishizuka-Katsura, Y, Mishima-Tsumagari, C, Yonemochi, M, Inoue, M, Nakagawa, R, Kaushik, R, Zhang, K.Y.J, Shirouzu, M.
登録日2023-05-23
公開日2024-05-29
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.76 Å)
主引用文献RhoG facilitates a conformational transition in the guanine nucleotide exchange factor complex DOCK5/ELMO1 to an open state.
J.Biol.Chem., 300, 2024
3UR6
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BU of 3ur6 by Molmil
1.5A resolution structure of apo Norwalk Virus Protease
分子名称: 3C-like protease
著者Lovell, S, Battaile, K.P, Kim, Y, Tiew, K.C, Mandadapu, S.R, Alliston, K.R, Groutas, W.C, Chang, K.O.
登録日2011-11-21
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Broad-Spectrum Antivirals against 3C or 3C-Like Proteases of Picornaviruses, Noroviruses, and Coronaviruses.
J.Virol., 86, 2012
8UGP
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BU of 8ugp by Molmil
In-situ structure of typeA supercomplex in respiratory chain ( local refined map focused on CI iron-sulfur cluster regions )
分子名称: IRON/SULFUR CLUSTER, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
8UGE
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BU of 8uge by Molmil
In-situ complex III, state II
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
8UGL
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BU of 8ugl by Molmil
High resolution in-situ structure of complex IV in respiratory supercomplex
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
8UGK
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BU of 8ugk by Molmil
High resolution in-situ structure of complex III in respiratory supercomplex (composite)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
7XSN
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BU of 7xsn by Molmil
Native Tetrahymena ribozyme conformation
分子名称: RNA (387-MER)
著者Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
登録日2022-05-14
公開日2022-08-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
8UGD
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BU of 8ugd by Molmil
In-situ complex III, state I
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
7XSM
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BU of 7xsm by Molmil
Misfolded Tetrahymena ribozyme conformation 3
分子名称: RNA (388-MER)
著者Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
登録日2022-05-14
公開日2022-08-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.01 Å)
主引用文献Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSL
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BU of 7xsl by Molmil
Misfolded Tetrahymena ribozyme conformation 2
分子名称: RNA (388-MER)
著者Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
登録日2022-05-14
公開日2022-08-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XSK
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BU of 7xsk by Molmil
Misfolded Tetrahymena ribozyme conformation 1
分子名称: RNA (388-MER)
著者Li, S, Palo, M, Pintilie, G, Zhang, X, Su, Z, Kappel, K, Chiu, W, Zhang, K, Das, R.
登録日2022-05-14
公開日2022-08-03
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Topological crossing in the misfolded Tetrahymena ribozyme resolved by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
8UGG
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BU of 8ugg by Molmil
In-situ complex III, state IV
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
8UGF
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BU of 8ugf by Molmil
In-situ complex III, state III
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
6G6N
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BU of 6g6n by Molmil
Crystal structure of the computationally designed Tako8 protein in C2
分子名称: Tako8
著者Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
登録日2018-04-01
公開日2018-11-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
8JVB
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BU of 8jvb by Molmil
Cryo-EM structure of the Type II secretion system protein from Acidithiobacillus caldus
分子名称: Type II and III secretion system protein
著者Liu, R.H, Zhang, K, Feng, Q.S, Dai, X, Fu, Y, Li, Y.
登録日2023-06-28
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Cryo-EM structure of the Type II secretion system protein from Acidithiobacillus caldus
To Be Published
6G6P
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Crystal structure of the computationally designed Ika8 protein: crystal packing No.2 in P63
分子名称: Ika8
著者Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
登録日2018-04-01
公開日2018-11-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
5AFU
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BU of 5afu by Molmil
Cryo-EM structure of dynein tail-dynactin-BICD2N complex
分子名称: ACTIN, CYTOPLASMIC 1, ADENOSINE-5'-DIPHOSPHATE, ...
著者Urnavicius, L, Zhang, K, Diamant, A.G, Motz, C, Schlager, M.A, Yu, M, Patel, N.A, Robinson, C.V, Carter, A.P.
登録日2015-01-26
公開日2015-03-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献The Structure of the Dynactin Complex and its Interaction with Dynein.
Science, 347, 2015

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