Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 20 件

2MTZ
DownloadVisualize
BU of 2mtz by Molmil
Haddock model of Bacillus subtilis L,D-transpeptidase in complex with a peptidoglycan hexamuropeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, Putative L,D-transpeptidase YkuD, intact bacterial peptidoglycan
著者Schanda, P, Triboulet, S, Laguri, C, Bougault, C, Ayala, I, Callon, M, Arthur, M, Simorre, J.
登録日2014-09-02
公開日2015-01-14
最終更新日2023-11-15
実験手法SOLID-STATE NMR
主引用文献Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan.
J.Am.Chem.Soc., 136, 2014
1EUI
DownloadVisualize
BU of 1eui by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
著者Ravishankar, R, Sagar, M.B, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
登録日1998-06-18
公開日1999-06-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献X-ray analysis of a complex of Escherichia coli uracil DNA glycosylase (EcUDG) with a proteinaceous inhibitor. The structure elucidation of a prokaryotic UDG.
Nucleic Acids Res., 26, 1998
1LQG
DownloadVisualize
BU of 1lqg by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
著者Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
登録日2002-05-10
公開日2002-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
6R8N
DownloadVisualize
BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
分子名称: Tetrahedral aminopeptidase, ZINC ION
著者Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
登録日2019-04-02
公開日2019-08-14
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
主引用文献Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
6F3K
DownloadVisualize
BU of 6f3k by Molmil
Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii
分子名称: Tetrahedral aminopeptidase, ZINC ION
著者Gauto, D.F, Estrozi, L.F, Schwieters, C.D, Effantin, G, Macek, P, Sounier, R, Kerfah, R, Sivertsen, A.C, Colletier, J.P, Boisbouvier, J, Schoehn, G, Favier, A, Schanda, P.
登録日2017-11-28
公開日2018-03-14
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.1 Å), SOLID-STATE NMR, SOLUTION NMR
主引用文献Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
4XOL
DownloadVisualize
BU of 4xol by Molmil
Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Peixiang, M, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4XOF
DownloadVisualize
BU of 4xof by Molmil
Observing the overall rocking motion of a protein in a crystal - Orthorhombic Ubiquitin crystals without Zinc.
分子名称: Ubiquitin
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4XOK
DownloadVisualize
BU of 4xok by Molmil
Observing the overall rocking motion of a protein in a crystal.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
6HWN
DownloadVisualize
BU of 6hwn by Molmil
Structure of Thermus thermophilus ClpP in complex with a tripeptide.
分子名称: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, Unknown tripeptide
著者Felix, J, Schanda, P, Fraga, H, Morlot, C.
登録日2018-10-12
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
6HWM
DownloadVisualize
BU of 6hwm by Molmil
Structure of Thermus thermophilus ClpP in complex with bortezomib
分子名称: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE
著者Felix, J, Schanda, P, Fraga, H, Morlot, C.
登録日2018-10-12
公開日2019-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
1EZT
DownloadVisualize
BU of 1ezt by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
分子名称: REGULATOR OF G-PROTEIN SIGNALING 4
著者Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
登録日2000-05-11
公開日2001-01-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
1EZY
DownloadVisualize
BU of 1ezy by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
分子名称: REGULATOR OF G-PROTEIN SIGNALING 4
著者Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
登録日2000-05-12
公開日2001-01-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
2K0Q
DownloadVisualize
BU of 2k0q by Molmil
Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34
分子名称: Putative uncharacterized protein copK
著者Bersch, B, Favier, A, Schanda, P, Coves, J, van Aelst, S, Vallaeys, T, Wattiez, R, Mergeay, M.
登録日2008-02-12
公開日2008-05-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge.
J.Mol.Biol., 380, 2008
1S1G
DownloadVisualize
BU of 1s1g by Molmil
Crystal Structure of Kv4.3 T1 Domain
分子名称: Potassium voltage-gated channel subfamily D member 3, ZINC ION
著者Scannevin, R.H, Wang, K.W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.X, Xu, Z.B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
登録日2004-01-06
公開日2004-03-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
1S1E
DownloadVisualize
BU of 1s1e by Molmil
Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
分子名称: CALCIUM ION, Kv channel interacting protein 1
著者Scannevin, R.H, Wang, K.-W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.-X, Xu, Z.-B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
登録日2004-01-06
公開日2005-01-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
2L3Z
DownloadVisualize
BU of 2l3z by Molmil
Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin
分子名称: Ubiquitin
著者Huber, M, Hiller, S, Schanda, P, Ernst, M, Bockmann, A, Verel, R, Meier, B.H.
登録日2010-09-27
公開日2011-02-16
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination.
Chemphyschem, 12, 2011
1FLS
DownloadVisualize
BU of 1fls by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC FRAGMENT OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR
分子名称: CALCIUM ION, COLLAGENASE-3, N-HYDROXY-2-[(4-METHOXY-BENZENESULFONYL)-PYRIDIN-3-YLMETHYL-AMINO]-3-METHYL-BENZAMIDE, ...
著者Moy, F.J, Chanda, P.K, Chen, J.M, Cosmi, S, Edris, W, Levin, J.I, Powers, R.
登録日2000-08-15
公開日2001-08-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High-resolution solution structure of the catalytic fragment of human collagenase-3 (MMP-13) complexed with a hydroxamic acid inhibitor.
J.Mol.Biol., 302, 2000
1FM1
DownloadVisualize
BU of 1fm1 by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC FRAGMENT OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR
分子名称: CALCIUM ION, COLLAGENASE-3, N-HYDROXY-2-[(4-METHOXY-BENZENESULFONYL)-PYRIDIN-3-YLMETHYL-AMINO]-3-METHYL-BENZAMIDE, ...
著者Moy, F.J, Chanda, P.K, Chen, J.M, Cosmi, S, Edris, W, Levin, J.I, Powers, R.
登録日2000-08-15
公開日2001-08-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High-resolution solution structure of the catalytic fragment of human collagenase-3 (MMP-13) complexed with a hydroxamic acid inhibitor.
J.Mol.Biol., 302, 2000
2LXT
DownloadVisualize
BU of 2lxt by Molmil
Allosteric communication in the KIX domain proceeds through dynamic re-packing of the hydrophobic core
分子名称: CREB-binding protein, Cyclic AMP-responsive element-binding protein 1, Histone-lysine N-methyltransferase MLL
著者Bruschweiler, S, Schanda, P, Konrat, R, Tollinger, M.
登録日2012-08-31
公開日2013-06-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Allosteric communication in the KIX domain proceeds through dynamic repacking of the hydrophobic core.
Acs Chem.Biol., 8, 2013
2LXS
DownloadVisualize
BU of 2lxs by Molmil
Allosteric communication in the KIX domain proceeds through dynamic re-packing of the hydrophobic core
分子名称: CREB-binding protein, Histone-lysine N-methyltransferase MLL
著者Bruschweiler, S, Schanda, P, Konrat, R, Tollinger, M.
登録日2012-08-31
公開日2013-06-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Allosteric communication in the KIX domain proceeds through dynamic repacking of the hydrophobic core.
Acs Chem.Biol., 8, 2013

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon