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PDB: 2074 results

6P0S
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BU of 6p0s by Molmil
Crystal structure of ternary DNA complex "FX2" containing E. coli Fis and phage lambda Xis
Descriptor: DNA (27-MER), FX1-2, DNA-binding protein Fis, ...
Authors:Hancock, S.P, Cascio, D, Johnson, R.C.
Deposit date:2019-05-17
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cooperative DNA binding by proteins through DNA shape complementarity.
Nucleic Acids Res., 47, 2019
5MFD
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BU of 5mfd by Molmil
Designed armadillo repeat protein YIIIM''6AII in complex with pD_(KR)5
Descriptor: CALCIUM ION, Capsid decoration protein,pD_(KR)5, YIIIM''6AII
Authors:Hansen, S, Kiefer, J, Madhurantakam, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of designed armadillo repeat proteins binding to peptides fused to globular domains.
Protein Sci., 26, 2017
5MA5
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BU of 5ma5 by Molmil
GFP-binding DARPin fusion gc_K11
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Green fluorescent protein, ...
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
4P1V
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BU of 4p1v by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with H-type 2 HBGA
Descriptor: P domain of VPI, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-02-27
Release date:2014-04-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5497 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
3SLN
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BU of 3sln by Molmil
Structural characterization of a GII.4 2004 norovirus variant (TCH05) bound to H pentasaccharide
Descriptor: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Shanker, S, Choi, J.-M, Sankaran, B, Atmar, R.L, Estes, M.K, Prasad, B.V.V.
Deposit date:2011-06-24
Release date:2011-07-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Structural Analysis of Histo-Blood Group Antigen Binding Specificity in a Norovirus GII.4 Epidemic Variant: Implications for Epochal Evolution.
J.Virol., 85, 2011
5GVX
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BU of 5gvx by Molmil
Structural insight into dephosphorylation by Trehalose 6-phosphate Phosphatase (OtsB2) from Mycobacterium Tuberculosis
Descriptor: MAGNESIUM ION, Trehalose-phosphate phosphatase
Authors:Shan, S, Min, H, Liu, T, Jiang, D, Rao, Z.
Deposit date:2016-09-07
Release date:2017-09-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Structural insight into dephosphorylation by trehalose 6-phosphate phosphatase (OtsB2) from Mycobacterium tuberculosis.
FASEB J., 30, 2016
6FXB
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BU of 6fxb by Molmil
Bovine beta-lactoglobulin variant A at pH 4.0
Descriptor: DI(HYDROXYETHYL)ETHER, Major allergen beta-lactoglobulin, NITRATE ION
Authors:Khan, S, Ipsen, R, Almdal, K, Svensson, B, Harris, P.
Deposit date:2018-03-08
Release date:2018-05-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Revealing the Dimeric Crystal and Solution Structure of beta-Lactoglobulin at pH 4 and Its pH and Salt Dependent Monomer-Dimer Equilibrium.
Biomacromolecules, 19, 2018
4JFA
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BU of 4jfa by Molmil
Crystal Structure of Plasmodium falciparum Tryptophanyl-tRNA synthetase
Descriptor: BETA-MERCAPTOETHANOL, POTASSIUM ION, TRYPTOPHAN, ...
Authors:Khan, S, Garg, A, Manickam, Y, Sharma, A.
Deposit date:2013-02-28
Release date:2014-01-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An appended domain results in an unusual architecture for malaria parasite tryptophanyl-tRNA synthetase
Plos One, 8, 2013
1Y67
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BU of 1y67 by Molmil
Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans
Descriptor: FE (III) ION, Manganese Superoxide dismutase
Authors:Chan, S, Tanaka, S, Sawaya, M.R, Perry, L.J.
Deposit date:2004-12-03
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans
To be Published
3SJP
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BU of 3sjp by Molmil
Structural characterization of a GII.4 2004 norovirus variant (TCH05)
Descriptor: Capsid, ZINC ION
Authors:Shanker, S, Choi, J.-M, Sankaran, B, Atmar, R.L, Estes, M.K, Prasad, B.V.V.
Deposit date:2011-06-21
Release date:2011-07-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural Analysis of Histo-Blood Group Antigen Binding Specificity in a Norovirus GII.4 Epidemic Variant: Implications for Epochal Evolution.
J.Virol., 85, 2011
4P2N
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BU of 4p2n by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with LeX HBGA
Descriptor: Major capsid protein, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-03-04
Release date:2014-04-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4LRG
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BU of 4lrg by Molmil
Structure of BRD4 bromodomain 1 with a dimethyl thiophene isoxazole azepine carboxamide
Descriptor: 2-[(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-[1,2]oxazolo[5,4-c]thieno[2,3-e]azepin-6-yl]acetamide, Bromodomain-containing protein 4
Authors:Ravichandran, S, Jayaram, H, Poy, F, Gehling, V, Hewitt, M, Vaswani, R, Leblanc, Y, Cote, A, Nasveschuk, C, Taylor, A, Harmange, J.-C, Audia, J, Pardo, E, Joshi, S, Sandy, P, Mertz, J, Sims, R, Bergeron, L, Bryant, B, Yellapuntala, S, Nandana, B.S, Birudukota, S, Albrecht, B, Bellon, S.
Deposit date:2013-07-19
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Discovery, Design, and Optimization of Isoxazole Azepine BET Inhibitors.
ACS Med Chem Lett, 4, 2013
5XWI
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BU of 5xwi by Molmil
Crystal Structure of SPAP, an alkaline phosphatase from Sphingomonas showing covalent intermediate
Descriptor: Alkaline phosphatase PhoK, CALCIUM ION, GLYCEROL, ...
Authors:Bihani, S.C.
Deposit date:2017-06-29
Release date:2018-07-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.872 Å)
Cite:Crystal Structure of SPAP, an alkaline phosphatase from Sphingomonas showing covalent intermediate
To Be Published
1KAW
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BU of 1kaw by Molmil
STRUCTURE OF SINGLE STRANDED DNA BINDING PROTEIN (SSB)
Descriptor: SINGLE-STRANDED DNA BINDING PROTEIN
Authors:Raghunathan, S, Waksman, G.
Deposit date:1996-12-06
Release date:1997-12-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution.
Proc.Natl.Acad.Sci.USA, 94, 1997
4R42
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BU of 4r42 by Molmil
Crystal structure of KatB, a manganese catalase from Anabaena PCC7120
Descriptor: Alr3090 protein, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bihani, S.C.
Deposit date:2014-08-19
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:KatB, a cyanobacterial Mn-catalase with unique active site configuration: Implications for enzyme function.
Free Radic. Biol. Med., 93, 2016
2PH9
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BU of 2ph9 by Molmil
Galanthamine bound to an ACh-binding Protein
Descriptor: (-)-GALANTHAMINE, Soluble acetylcholine receptor, TETRAETHYLENE GLYCOL
Authors:Hansen, S.B, Taylor, P.
Deposit date:2007-04-10
Release date:2007-07-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Galanthamine and non-competitive inhibitor binding to ACh-binding protein: evidence for a binding site on non-alpha-subunit interfaces of heteromeric neuronal nicotinic receptors.
J.Mol.Biol., 369, 2007
3THF
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BU of 3thf by Molmil
Crystal structure of the SD2 domain from Drosophila Shroom
Descriptor: Protein Shroom
Authors:Mohan, S, VanDemark, A.P.
Deposit date:2011-08-18
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6951 Å)
Cite:Structure of Shroom domain 2 reveals a three-segmented coiled-coil required for dimerization, Rock binding, and apical constriction.
Mol Biol Cell, 23, 2012
7DT9
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BU of 7dt9 by Molmil
D30N HIV Protease in complex with Saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, Protease
Authors:Bihani, S.C, Hosur, M.V.
Deposit date:2021-01-04
Release date:2022-01-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:D30N HIV Protease in complex with Saquinavir
To Be Published
5YXZ
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BU of 5yxz by Molmil
Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI484
Descriptor: 1,2-ETHANEDIOL, 1-[4-[6-chloranyl-8-fluoranyl-7-(2-fluorophenyl)quinazolin-4-yl]piperazin-1-yl]propan-1-one, GTPase KRas, ...
Authors:Swaminathan, S, Thakur, M.K, Kandan, S, Gautam, A, Kanavalli, M, Simhadri, P, Gosu, R.
Deposit date:2017-12-07
Release date:2018-04-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI484
To Be Published
5YY1
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BU of 5yy1 by Molmil
Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI739
Descriptor: 1,2-ETHANEDIOL, 1-[4-[6-chloranyl-8-fluoranyl-7-[2-(trifluoromethyl)phenyl]quinazolin-4-yl]piperazin-1-yl]propan-1-one, GTPase KRas, ...
Authors:Swaminathan, S, Thakur, M.K, Kandan, S, Gautam, A, Kanavalli, M, Simhadri, P, Gosu, R.
Deposit date:2017-12-07
Release date:2018-04-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI739
To Be Published
1R9Y
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BU of 1r9y by Molmil
Bacterial cytosine deaminase D314A mutant.
Descriptor: Cytosine deaminase, FE (III) ION, GLYCEROL, ...
Authors:Mahan, S.D, Ireton, G.C, Stoddard, B.L, Black, M.E.
Deposit date:2003-10-31
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Random mutagenesis and selection of Escherichia coli cytosine deaminase for cancer gene therapy.
Protein Eng.Des.Sel., 17, 2004
2K43
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BU of 2k43 by Molmil
Acidic fibroblast growth factor solution structure in the FGF-1-C2A binary complex: key component in the fibroblast growthfactor non-classical pathway
Descriptor: Heparin-binding growth factor 1
Authors:Mohan, S.K, Yu, C.
Deposit date:2008-05-28
Release date:2009-06-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:FGF-1-C2A binary complex structure: key component in the acidic fibroblast growth factor release
To be Published
7FJH
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BU of 7fjh by Molmil
LecA from Pseudomonas aeruginosa in complex with 4-Phenylbutyryl hydroxamic acid (CAS: 32153-46-1)
Descriptor: CALCIUM ION, N-oxidanyl-4-phenyl-butanamide, PA-I galactophilic lectin
Authors:Shanina, S, Kuhaudomlarp, S, Siebs, E, Fuchsberger, F, Denis, M, da Silva Figueiredo Celstino Gomes, P, Clausen, M.H, Seeberger, P.H, Rognan, D, Titz, A, Imberty, A, Rademacher, C.
Deposit date:2021-08-04
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Targeting undruggable carbohydrate recognition sites through focused fragment library design.
Commun Chem, 5, 2022
5CHL
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BU of 5chl by Molmil
Structural basis of H2A.Z recognition by YL1 histone chaperone component of SRCAP/SWR1 chromatin remodeling complex
Descriptor: Histone H2A.Z, Vacuolar protein sorting-associated protein 72 homolog
Authors:Shan, S, Liang, X, Pan, L, Wu, C, Zhou, Z.
Deposit date:2015-07-10
Release date:2016-03-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Structural basis of H2A.Z recognition by SRCAP chromatin-remodeling subunit YL1
Nat.Struct.Mol.Biol., 23, 2016
4HPK
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BU of 4hpk by Molmil
Crystal structure of Clostridium histolyticum colg collagenase collagen-binding domain 3B at 1.35 Angstrom resolution in presence of calcium nitrate
Descriptor: CALCIUM ION, CHLORIDE ION, Collagenase, ...
Authors:Philominathan, S.T.L, Wilson, J.J, Bauer, R, Matsushita, O, Sakon, J.
Deposit date:2012-10-24
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Comparison of ColH and ColG Collagen-Binding Domains from Clostridium histolyticum.
J.Bacteriol., 195, 2013

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