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PDB: 2026 件
6VQY
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BU of 6vqy by Molmil
HLA-B*27:05 presenting an HIV-1 7mer peptide
分子名称: 7-mer peptide, ARGININE, Beta-2-microglobulin, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-06
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
3PU5
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BU of 3pu5 by Molmil
The crystal structure of a putative extracellular solute-binding protein from Bordetella parapertussis
分子名称: GLYCEROL, extracellular solute-binding protein
著者Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-12-03
公開日2010-12-22
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of aa putative extracellular solute-binding protein from Bordetella parapertussis
To be Published
6VQZ
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BU of 6vqz by Molmil
HLA-B*27:05 presenting an HIV-1 6mer peptide
分子名称: 6-mer peptide, ARGININE, Beta-2-microglobulin, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-06
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
6VPZ
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BU of 6vpz by Molmil
HLA-B*27:05 presenting an HIV-1 11mer peptide
分子名称: 11-mer peptide, Beta-2-microglobulin, GLYCEROL, ...
著者Pymm, P, Tenzer, S, Wee, E, Weimershaus, M, Burgevin, A, Kollnberger, S, Gerstoft, J, Josephs, T.M, Ladell, K, Mclaren, J.E, Appay, V, Price, D.A, Fugger, L, Bell, J.I, Hansjorg, S, Van Endert, P, Harkiolaki, M, Iversen, A.K.N.
登録日2020-02-04
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Epitope length variants balance protective immune responses and viral escape in HIV-1 infection
Cell Rep, 38, 2022
6RLS
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BU of 6rls by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (apo species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_apo
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2019-05-02
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
5ABG
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BU of 5abg by Molmil
Structure of GH84 with ligand
分子名称: 1,2-ETHANEDIOL, 2-[(2R,3S,4R,5R)-1-[3-(4-fluorophenyl)propyl]-5-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-2-yl]-N-methyl-ethanamide, CALCIUM ION, ...
著者Bergeron-Brlek, M, Goodwin-Tindall, J, Cekic, N, Varghese, V, Zandberg, W.F, Shan, X, Roth, C, Chan, S, Davies, G.J, Vocadlo, D.J, Britton, R.
登録日2015-08-05
公開日2015-11-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Convenient Approach to Stereoisomeric Iminocyclitols: Generation of Potent Brain-Permeable Oga Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
2B1N
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BU of 2b1n by Molmil
Crystal structure of a papain-fold protein without the catalytic cysteine from seeds of Pachyrhizus erosus
分子名称: SPE31, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose, peptide (LYS)(ALA)(SER)(VAL)(GLY)
著者Zhang, M, Wei, Z, Chang, S.
登録日2005-09-16
公開日2006-10-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a papain-fold protein without the catalytic residue: a novel member in the cysteine proteinase family
J.Mol.Biol., 358, 2006
6GYV
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BU of 6gyv by Molmil
Lariat-capping ribozyme (circular permutation form)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lariat-capping ribozyme, MAGNESIUM ION, ...
著者Masquida, B, Meyer, M, Nielsen, H, Olieric, V, Roblin, P, Johansen, S.D, Westhof, E.
登録日2018-07-02
公開日2018-08-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.50003624 Å)
主引用文献Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
5ABF
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BU of 5abf by Molmil
Structure of GH84 with ligand
分子名称: 1,2-ETHANEDIOL, 2-[(2S,3R,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide, CALCIUM ION, ...
著者Bergeron-Brlek, M, Goodwin-Tindall, J, Cekic, N, Varghese, V, Zandberg, W.F, Shan, X, Roth, C, Chan, S, Davies, G.J, Vocadlo, D.J, Britton, R.
登録日2015-08-05
公開日2015-11-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Convenient Approach to Stereoisomeric Iminocyclitols: Generation of Potent Brain-Permeable Oga Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
7SN3
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BU of 7sn3 by Molmil
Structure of human SARS-CoV-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable region)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, J, Abraham, J, Shankar, S.
登録日2021-10-27
公開日2021-12-08
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for continued antibody evasion by the SARS-CoV-2 receptor binding domain.
Science, 375, 2022
7SN2
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BU of 7sn2 by Molmil
Structure of human SARS-CoV-2 neutralizing antibody C1C-A3 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, J, Abraham, J, Yang, P, Shankar, S.
登録日2021-10-27
公開日2021-12-08
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis for continued antibody evasion by the SARS-CoV-2 receptor binding domain.
Science, 375, 2022
7FJC
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BU of 7fjc by Molmil
Crystal structure of SARS-CoV-2 Beta RBD complexed with P36-5D2 Fab
分子名称: P36-5D2 heavy chain, P36-5D2 light chain, Spike protein S1, ...
著者Zhang, L.Q, Wang, X.Q, Shan, S.S, Lan, J.
登録日2021-08-03
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Crystal structure of SARS-CoV-2 Beta RBD complexed with P36-5D2 Fab
To Be Published
7OYY
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BU of 7oyy by Molmil
E.coli's putrescine receptor variant PotF/D (4JDF) with mutation S247D in complex with spermidine
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Kroeger, P, Shanmugaratnam, S, Hocker, B.
登録日2021-06-25
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
J.Biol.Chem., 297, 2021
3RHA
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BU of 3rha by Molmil
The crystal structure of Oxidoreductase from Arthrobacter aurescens
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLYCEROL, Putrescine oxidase
著者Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-11
公開日2011-05-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献The crystal structure of Oxidoreductase from Arthrobacter aurescens
To be Published
6FY6
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BU of 6fy6 by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_major, MERCURY (II) ION
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2018-03-11
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
3RAZ
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BU of 3raz by Molmil
The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
分子名称: Thioredoxin-related protein
著者Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2011-03-28
公開日2011-05-11
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
To be Published
3RYS
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BU of 3rys by Molmil
The crystal structure of adenine deaminase (AAur1117) from Arthrobacter aurescens
分子名称: ADENINE, Adenosine deaminase 1, ZINC ION
著者Zhang, Z, Goble, A.M, Raushel, F.M, Swaminathan, S.
登録日2011-05-11
公開日2011-05-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献The crystal structure of adenine deaminase (AAur1117) from Arthrobacter aurescens
To be Published
3IWM
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BU of 3iwm by Molmil
The octameric SARS-CoV main protease
分子名称: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
著者Zhong, N, Zhang, S, Xue, F, Lou, Z, Rao, Z, Xia, B.
登録日2009-09-02
公開日2010-07-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Three-dimensional domain swapping as a mechanism to lock the active conformation in a super-active octamer of SARS-CoV main protease
Protein Cell, 1, 2010
3S6J
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BU of 3s6j by Molmil
The crystal structure of a hydrolase from Pseudomonas syringae
分子名称: CALCIUM ION, Hydrolase, haloacid dehalogenase-like family
著者Zhang, Z, Syed Ibrahim, B, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2011-05-25
公開日2011-07-13
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献The crystal structure of a hydrolase from Pseudomonas syringae
To be Published
4K3B
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BU of 4k3b by Molmil
The crystal structure of BamA from Neisseria gonorrhoeae
分子名称: Outer membrane protein assembly factor BamA
著者Noinaj, N, Lukacik, P, Chang, H, Easley, N, Buchanan, S.K.
登録日2013-04-10
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insight into the biogenesis of beta-barrel membrane proteins.
Nature, 501, 2013
2B1M
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BU of 2b1m by Molmil
Crystal structure of a papain-fold protein without the catalytic cysteine from seeds of Pachyrhizus erosus
分子名称: DI(HYDROXYETHYL)ETHER, SPE31, TETRAETHYLENE GLYCOL, ...
著者Zhang, M, Wei, Z, Chang, S.
登録日2005-09-16
公開日2006-10-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a papain-fold protein without the catalytic residue: a novel member in the cysteine proteinase family
J.Mol.Biol., 358, 2006
3RH9
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BU of 3rh9 by Molmil
The crystal structure of oxidoreductase from Marinobacter aquaeolei
分子名称: Succinate-semialdehyde dehydrogenase (NAD(P)(+))
著者Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-11
公開日2011-05-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献The crystal structure of oxidoreductase from Marinobacter aquaeolei
To be Published
3RHE
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BU of 3rhe by Molmil
The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
分子名称: NAD-dependent benzaldehyde dehydrogenase
著者Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-11
公開日2011-05-04
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (2.053 Å)
主引用文献The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
To be Published
3R03
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BU of 3r03 by Molmil
The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
分子名称: ADENOSINE-5'-DIPHOSPHATE, NUDIX hydrolase
著者Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2011-03-07
公開日2011-05-11
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
To be Published
3OXN
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BU of 3oxn by Molmil
The crystal structure of a putative transcriptional regulator from Vibrio parahaemolyticus
分子名称: Putative transcriptional regulator, LysR family, SULFATE ION
著者Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-09-21
公開日2010-10-13
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of a putative transcriptional regulator from Vibrio parahaemolyticus
To be Published

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件を2024-07-31に公開中

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