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PDB: 613 results

2YU2
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BU of 2yu2 by Molmil
Crystal structure of hJHDM1A without a-ketoglutarate
Descriptor: FE (II) ION, JmjC domain-containing histone demethylation protein 1A
Authors:Han, Z.
Deposit date:2007-04-05
Release date:2007-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for histone demethylation by JHDM1
To be Published
2YU1
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BU of 2yu1 by Molmil
Crystal structure of hJHDM1A complexed with a-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1A
Authors:Han, Z.
Deposit date:2007-04-05
Release date:2007-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for histone demethylation by JHDM1
To be Published
4D4Z
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BU of 4d4z by Molmil
STRUCTURE OF HUMAN DEOXYHYPUSINE HYDROXYLASE in complex with glycerol
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYHYPUSINE HYDROXYLASE, FE (III) ION, ...
Authors:Han, Z, Sakai, N, Hilgenfeld, R.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Peroxo-Diiron(III) Intermediate of Deoxyhypusine Hydroxylase, an Oxygenase Involved in Hypusination.
Structure, 23, 2015
4D50
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BU of 4d50 by Molmil
Structure of human deoxyhypusine hydroxylase
Descriptor: DEOXYHYPUSINE HYDROXYLASE, FE (III) ION, GUANIDINE, ...
Authors:Han, Z, Sakai, N, Hilgenfeld, R.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Peroxo-Diiron(III) Intermediate of Deoxyhypusine Hydroxylase, an Oxygenase Involved in Hypusination.
Structure, 23, 2015
6KRY
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BU of 6kry by Molmil
Structure of staphylococcal enterotoxin SEN
Descriptor: Enterotoxin SEN variant
Authors:Han, Z, Zeng, C.
Deposit date:2019-08-22
Release date:2019-12-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Staphylococcal Enterotoxin N: Implications for Binding Properties to Its Cellular Proteins.
Int J Mol Sci, 20, 2019
2QXV
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BU of 2qxv by Molmil
Structural basis of EZH2 recognition by EED
Descriptor: Embryonic ectoderm development, Enhancer of zeste homolog 2
Authors:Han, Z.
Deposit date:2007-08-13
Release date:2007-08-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural basis of EZH2 recognition by EED
Structure, 15, 2007
8BDP
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BU of 8bdp by Molmil
A GH20 family sulfoglycosidase Bt4394 in complex with NAG-thiazoline and sulfite
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION
Authors:Zhang, Z, He, Y, Jin, Y.
Deposit date:2022-10-19
Release date:2023-01-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Mechanistic and Structural Insights into the Specificity and Biological Functions of Bacterial Sulfoglycosidases
Acs Catalysis, 2022
1HQW
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BU of 1hqw by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF CONCANAVALIN A WITH A TRIPEPTIDE YPY
Descriptor: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION, ...
Authors:Zhang, Z, Qian, M, Huang, Q, Jia, Y, Tang, Y, Wang, K, Cui, D, Li, M.
Deposit date:2000-12-20
Release date:2003-10-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the complex of concanavalin A and tripeptide
J.PROTEIN CHEM., 20, 2001
6Y5Q
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BU of 6y5q by Molmil
human 17S U2 snRNP
Descriptor: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, Probable ATP-dependent RNA helicase DDX46, ...
Authors:Zhang, Z, Will, C.L, Bertram, K, Luehrmann, R, Stark, H.
Deposit date:2020-02-25
Release date:2020-06-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Molecular architecture of the human 17S U2 snRNP.
Nature, 583, 2020
6Y50
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BU of 6y50 by Molmil
5'domain of human 17S U2 snRNP
Descriptor: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, Probable ATP-dependent RNA helicase DDX46, ...
Authors:Zhang, Z, Will, C.L, Bertram, K, Luehrmann, R, Stark, H.
Deposit date:2020-02-24
Release date:2020-07-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Molecular architecture of the human 17S U2 snRNP.
Nature, 583, 2020
8HNC
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BU of 8hnc by Molmil
Cryo-EM structure of human OATP1B1 in complex with bilirubin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, ...
Authors:Shan, Z, Yang, X, Liu, H, Nan, J, Yuan, Y, Zhang, Y.
Deposit date:2022-12-07
Release date:2023-09-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
8HNB
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BU of 8hnb by Molmil
Cryo-EM structure of human OATP1B1 in apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier organic anion transporter family member 1B1
Authors:Shan, Z, Yang, X, Zhang, Y.
Deposit date:2022-12-07
Release date:2023-09-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
8HNH
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BU of 8hnh by Molmil
Cryo-EM structure of human OATP1B1 in complex with simeprevir
Descriptor: (2R,3aR,10Z,11aS,12aR,14aR)-N-(cyclopropylsulfonyl)-2-({7-methoxy-8-methyl-2-[4-(1-methylethyl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-4,14-dioxo-2,3,3a,4,5,6,7,8,9,11a,12,13,14,14a-tetradecahydrocyclopenta[c]cyclopropa[g][1,6]diazacyclotetradecine-12a(1H)-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shan, Z, Yang, X, Zhang, Y.
Deposit date:2022-12-07
Release date:2023-09-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
8HND
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BU of 8hnd by Molmil
Cryo-EM structure of human OATP1B1 in complex with estrone-3-sulfate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier organic anion transporter family member 1B1, ...
Authors:Shan, Z, Yang, X, Liu, H, Nan, J, Yuan, Y, Zhang, Y.
Deposit date:2022-12-07
Release date:2023-09-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
6Y53
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BU of 6y53 by Molmil
human 17S U2 snRNP low resolution part
Descriptor: HIV Tat-specific factor 1, Probable ATP-dependent RNA helicase DDX46, Small nuclear ribonucleoprotein E, ...
Authors:Zhang, Z, Will, C.L, Bertram, K, Luehrmann, R, Stark, H.
Deposit date:2020-02-24
Release date:2020-06-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Molecular architecture of the human 17S U2 snRNP.
Nature, 583, 2020
3FKD
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BU of 3fkd by Molmil
The crystal structure of L-threonine-O-3-phosphate decarboxylase from Porphyromonas gingivalis
Descriptor: L-threonine-O-3-phosphate decarboxylase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-16
Release date:2009-02-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of L-threonine-O-3-phosphate decarboxylase from Porphyromonas gingivalis
To be Published
5JO4
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BU of 5jo4 by Molmil
Antibody Fab Fragment Complex
Descriptor: D80 Fab Heavy Chain, D80 Fab Light Chain, G6 Fab Heavy Chain, ...
Authors:Zhang, Z, Prachanronarong, K.P, Marasco, W.A, Schiffer, C.A.S.
Deposit date:2016-05-01
Release date:2017-11-08
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural Basis of an Influenza Hemagglutinin Stem-Directed Antibody Retaining the G6 Idiotype
To Be Published
5JQD
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BU of 5jqd by Molmil
Antibody Fab Fragment
Descriptor: D80 Fab Fragment Heavy Chain, D80 Fab Fragment Light Chain
Authors:Zhang, Z, Prachanronarong, K, Gellatly, K, Marasco, W.A, Schiffer, C.A.
Deposit date:2016-05-04
Release date:2017-11-08
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural Basis of an Influenza Hemagglutinin Stem-Directed Antibody Retaining the G6 Idiotype
To Be Published
3EVZ
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BU of 3evz by Molmil
Crystal structure of Methyltransferase from Pyrococcus furiosus
Descriptor: methyltransferase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-13
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of methyltransferase from Pyrococcus furiosus
To be Published
7OQB
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BU of 7oqb by Molmil
The U2 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: ACT1 pre-mRNA (delta-BS-A), Cold sensitive U2 snRNA suppressor 1, Pre-mRNA-processing ATP-dependent RNA helicase PRP5, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
7OQE
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BU of 7oqe by Molmil
Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA (delta BS-A), Cold sensitive U2 snRNA suppressor 1, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
7OQC
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BU of 7oqc by Molmil
The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A), Pre-mRNA-processing factor 39, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
3GG4
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BU of 3gg4 by Molmil
The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, glycerol kinase
Authors:Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-27
Release date:2009-03-31
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
To be Published
3GBT
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BU of 3gbt by Molmil
Crystal structure of gluconate kinase from Lactobacillus acidophilus
Descriptor: Gluconate kinase
Authors:Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-20
Release date:2009-03-10
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of gluconate kinase from Lactobacillus acidophilus
To be Published
3DZB
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BU of 3dzb by Molmil
Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
Descriptor: Prephenate dehydrogenase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
To be Published

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PDB entries from 2024-07-17

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