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PDB: 830 results

5N7M
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BU of 5n7m by Molmil
Protruding domain of GI.1 norovirus in complex with 2-fucosyllactose (2FL)
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1, SODIUM ION, ...
Authors:Hansman, G.S, Koromyslova, A.D.
Deposit date:2017-02-20
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Human norovirus inhibition by a human milk oligosaccharide.
Virology, 508, 2017
3B62
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BU of 3b62 by Molmil
EmrE multidrug transporter in complex with P4P, P21 crystal form
Descriptor: Multidrug transporter emrE, TETRAPHENYLPHOSPHONIUM
Authors:Chang, G, Chen, Y.J.
Deposit date:2007-10-26
Release date:2007-12-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:X-ray structure of EmrE supports dual topology model.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4X7E
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BU of 4x7e by Molmil
Crystal structure of norovirus GII.10 P domain in complex with Nano-85
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Capsid protein, ...
Authors:Hansman, G.H, Koromyslova, A.D.
Deposit date:2014-12-09
Release date:2014-12-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Nanobody binding to a conserved epitope promotes norovirus particle disassembly.
J.Virol., 89, 2015
1SWW
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BU of 1sww by Molmil
Crystal structure of the phosphonoacetaldehyde hydrolase D12A mutant complexed with magnesium and substrate phosphonoacetaldehyde
Descriptor: MAGNESIUM ION, PHOSPHONOACETALDEHYDE, phosphonoacetaldehyde hydrolase
Authors:Zhang, G, Morais, M.C, Dai, J, Zhang, W, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2004-03-30
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily
Biochemistry, 43, 2004
1O80
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BU of 1o80 by Molmil
Crystal structure of IP-10 H-Form
Descriptor: SMALL INDUCIBLE CYTOKINE B10
Authors:Swaminathan, G.J, Holloway, D.E, Papageorgiou, A.C, Acharya, K.R.
Deposit date:2002-11-20
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Oligomeric Forms of the Ip-10/Cxcl10 Chemokine
Structure, 11, 2003
1O7Z
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BU of 1o7z by Molmil
Crystal structure of IP-10 T-form
Descriptor: SMALL INDUCIBLE CYTOKINE B10
Authors:Swaminathan, G.J, Holloway, D.E, Papageorgiou, A.C, Acharya, K.R.
Deposit date:2002-11-20
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal Structures of Oligomeric Forms of the Ip-10/Cxcl10 Chemokine
Structure, 11, 2003
1O7Y
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BU of 1o7y by Molmil
Crystal structure of IP-10 M-form
Descriptor: SMALL INDUCIBLE CYTOKINE B10, SULFATE ION
Authors:Swaminathan, G.J, Holloway, D.E, Papageorgiou, A.C, Acharya, K.R.
Deposit date:2002-11-20
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structures of Oligomeric Forms of the Ip-10/Cxcl10 Chemokine
Structure, 11, 2003
1SWV
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BU of 1swv by Molmil
Crystal structure of the D12A mutant of phosphonoacetaldehyde hydrolase complexed with magnesium
Descriptor: MAGNESIUM ION, phosphonoacetaldehyde hydrolase
Authors:Zhang, G, Morais, M.C, Dai, J, Zhang, W, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2004-03-30
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily
Biochemistry, 43, 2004
3ONY
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BU of 3ony by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with Fucose
Descriptor: 1,2-ETHANEDIOL, Capsid protein, alpha-L-fucopyranose
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-08-30
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability.
J.Virol., 85, 2011
3ONU
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BU of 3onu by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026
Descriptor: 1,2-ETHANEDIOL, Capsid protein
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-08-30
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability.
J.Virol., 85, 2011
3PA1
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BU of 3pa1 by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type A
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ...
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-10-18
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability.
J.Virol., 85, 2011
1ZOL
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BU of 1zol by Molmil
native beta-PGM
Descriptor: MAGNESIUM ION, beta-phosphoglucomutase
Authors:Zhang, G, Tremblay, L.W, Dai, J, Wang, L, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-05-13
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic cycling in beta-phosphoglucomutase: a kinetic and structural analysis
Biochemistry, 44, 2005
2BRS
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BU of 2brs by Molmil
EMBP Heparin complex
Descriptor: 2-O-sulfo-beta-L-altropyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, EOSINOPHIL-GRANULE MAJOR BASIC PROTEIN, SULFATE ION
Authors:Swaminathan, G.J, Myszka, D.G, Katsamba, P.S, Ohnuki, L.E, Gleich, G.J, Acharya, K.R.
Deposit date:2005-05-11
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Eosinophil-Granule Major Basic Protein, a C-Type Lectin, Binds Heparin
Biochemistry, 44, 2005
3Q38
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BU of 3q38 by Molmil
Crystal structure of P domain from norwalk virus strain vietnam 026 in complex with HBGA type B (triglycan)
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ...
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-12-21
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
3Q3A
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BU of 3q3a by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type H2 (triglycan)
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ...
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-12-21
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
3PA2
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BU of 3pa2 by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type Ley
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ...
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-10-18
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability.
J.Virol., 85, 2011
3RFZ
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BU of 3rfz by Molmil
Crystal structure of the FimD usher bound to its cognate FimC:FimH substrate
Descriptor: Chaperone protein fimC, Outer membrane usher protein, type 1 fimbrial synthesis, ...
Authors:Phan, G, Remaut, H, Lebedev, A, Geibel, S, Waksman, G.
Deposit date:2011-04-07
Release date:2011-06-01
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the FimD usher bound to its cognate FimC-FimH substrate.
Nature, 474, 2011
3Q39
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BU of 3q39 by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type H2 (diglycan)
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE, ...
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2010-12-21
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
3PNR
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BU of 3pnr by Molmil
Structure of PbICP-C in complex with falcipain-2
Descriptor: CADMIUM ION, Falcipain 2, GLYCEROL, ...
Authors:Hansen, G, Hilgenfeld, R.
Deposit date:2010-11-19
Release date:2011-07-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the regulation of cysteine-protease activity by a new class of protease inhibitors in Plasmodium.
Structure, 19, 2011
3Q6Q
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BU of 3q6q by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lea
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE
Authors:Hansman, G.S, Biertumpfel, C, Chen, L, Georgiev, I, McLellan, J.S, Katayama, K, Kwong, P.D.
Deposit date:2011-01-03
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
3Q6R
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BU of 3q6r by Molmil
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex
Descriptor: 1,2-ETHANEDIOL, Capsid protein, IMIDAZOLE
Authors:Hansman, G.S, Biertumpfel, C, McLellan, J.S, Chen, L, Georgiev, I, Katayama, K, Kwong, P.D.
Deposit date:2011-01-03
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
2KTP
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BU of 2ktp by Molmil
Structure of the 1,N2-ethenodeoxyguanosine lesion opposite a one-base deletion in duplex DNA
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*(GNE)P*GP*AP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*TP*CP*AP*TP*GP*CP*G)-3')
Authors:Shanmugam, G, Kozekov, I.D, Guengerich, P.F, Rizzo, C.J, Stone, M.P.
Deposit date:2010-02-05
Release date:2010-03-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the 1,N(2)-etheno-2'-deoxyguanosine lesion in the 3'-G(epsilon dG)T-5' sequence opposite a one-base deletion.
Biochemistry, 49, 2010
2P5B
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BU of 2p5b by Molmil
The complex structure of JMJD2A and trimethylated H3K36 peptide
Descriptor: FE (II) ION, Histone H3, JmjC domain-containing histone demethylation protein 3A, ...
Authors:Zhang, G, Chen, Z, Zang, J, Hong, X, Shi, Y.
Deposit date:2007-03-14
Release date:2007-06-12
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis of the recognition of a methylated histone tail by JMJD2A.
Proc.Natl.Acad.Sci.USA, 104, 2007
1QKQ
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BU of 1qkq by Molmil
CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX
Descriptor: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose
Authors:Swaminathan, G.J, Leonidas, D.D, Acharya, K.R.
Deposit date:1999-07-31
Release date:2000-01-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution.
Biochemistry, 38, 1999
5HZB
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BU of 5hzb by Molmil
Crystal structure of GII.10 P domain in complex with 2-fucosyllactose (2'FL)
Descriptor: 1,2-ETHANEDIOL, Capsid protein, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hansman, G.S, Koromyslova, A.D, Singh, B.K.S.
Deposit date:2016-02-02
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.553 Å)
Cite:Structural Basis for Norovirus Inhibition by Human Milk Oligosaccharides.
J.Virol., 90, 2016

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