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PDB: 307 件

9CEW
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Spizellomyces punctatus Fanzor (SpuFz) State 3
分子名称: DNA (29-MER), DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*CP*GP*GP*TP*AP*CP*CP*CP*GP*GP*GP*CP*AP*TP*A)-3'), ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CF3
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Parasitella parasitica Fanzor (PpFz) State 4
分子名称: DNA non-target strand, DNA target strand, MAGNESIUM ION, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CF0
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Parasitella parasitica Fanzor (PpFz) State 1
分子名称: DNA non-target strand, DNA target strand, Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CER
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Guillardia theta Fanzor (GtFz) State 1
分子名称: Maltose/maltodextrin-binding periplasmic protein,Guillardia theta Fanzor1, RNA (142-MER), ZINC ION
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CET
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Guillardia theta Fanzor (GtFz) State 3
分子名称: DNA (28-MER), DNA (5'-D(P*AP*TP*GP*AP*CP*TP*TP*CP*TP*CP*TP*TP*AP*AP*AP*GP*GP*CP*CP*CP*CP*GP*GP*G)-3'), Maltose/maltodextrin-binding periplasmic protein,Guillardia theta Fanzor1, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CEV
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BU of 9cev by Molmil
Spizellomyces punctatus Fanzor (SpuFz) State 2
分子名称: DNA (35-MER), DNA (5'-D(P*CP*GP*GP*TP*AP*CP*CP*CP*GP*GP*GP*CP*AP*TP*A)-3'), MAGNESIUM ION, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CEY
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BU of 9cey by Molmil
Spizellomyces punctatus Fanzor (SpuFz) State 5
分子名称: DNA (26-MER), DNA (36-MER), MAGNESIUM ION, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
9CEZ
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Spizellomyces punctatus Fanzor (SpuFz) State 6
分子名称: DNA (27-MER), DNA (5'-D(P*TP*AP*CP*CP*CP*GP*GP*GP*CP*AP*TP*A)-3'), MAGNESIUM ION, ...
著者Xu, P, Saito, M, Zhang, F.
登録日2024-06-27
公開日2024-09-11
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Cell, 187, 2024
5YJL
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BU of 5yjl by Molmil
Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with NADPH and GBP
分子名称: Glutamyl-tRNA reductase 1, Glutamyl-tRNA reductase-binding protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhao, A, Han, F.
登録日2017-10-11
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Arabidopsis thaliana glutamyl-tRNAGlureductase in complex with NADPH and glutamyl-tRNAGlureductase binding protein
Photosyn. Res., 137, 2018
8UAB
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BU of 8uab by Molmil
SARS-CoV-2 main protease (Mpro) complex with AC1115
分子名称: 3C-like proteinase nsp5, N-[(2S)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-1H-indole-2-carboxamide
著者DuPrez, K.T, Chao, A, Han, F.Q.
登録日2023-09-20
公開日2024-02-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献Olgotrelvir, a dual inhibitor of SARS-CoV-2 M pro and cathepsin L, as a standalone antiviral oral intervention candidate for COVID-19
Med, 5, 2024
8UAC
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CATHEPSIN L IN COMPLEX WITH AC1115
分子名称: Cathepsin L, N-[(2S)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-1H-indole-2-carboxamide
著者Chao, A, DuPrez, K.T, Han, F.Q.
登録日2023-09-20
公開日2024-02-07
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Olgotrelvir, a dual inhibitor of SARS-CoV-2 M pro and cathepsin L, as a standalone antiviral oral intervention candidate for COVID-19.
Med, 5, 2024
6LK0
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BU of 6lk0 by Molmil
Crystal structure of human wild type TRIP13
分子名称: Pachytene checkpoint protein 2 homolog
著者Wang, Y, Huang, J, Li, B, Xue, H, Tricot, G, Hu, L, Xu, Z, Sun, X, Chang, S, Gao, L, Tao, Y, Xu, H, Xie, Y, Xiao, W, Yu, D, Kong, Y, Chen, G, Sun, X, Lian, F, Zhang, N, Wu, X, Mao, Z, Zhan, F, Zhu, W, Shi, J.
登録日2019-12-17
公開日2020-01-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Small-Molecule Inhibitor Targeting TRIP13 Suppresses Multiple Myeloma Progression.
Cancer Res., 80, 2020
9J1R
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BU of 9j1r by Molmil
Structure of a triple-helix region of human Collagen type II from Trautec
分子名称: SULFATE ION, Triple-helix region of human collagen type II
著者Fan, X, Chu, Y, Zhai, Y, Fu, S, Li, D, Cao, K, Feng, P, Wang, X, Le, H, Tang, D, Zhang, F, Qian, S.
登録日2024-08-05
公開日2024-08-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of a triple-helix region of human Collagen type II from Trautec
To Be Published
7BBJ
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BU of 7bbj by Molmil
CD73 in complex with the humanized antagonistic antibody mAb19
分子名称: 5'-nucleotidase, MAGNESIUM ION, ZINC ION, ...
著者Boettcher, J, Han, F.
登録日2020-12-17
公開日2021-12-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献A Novel Antagonistic CD73 Antibody for Inhibition of the Immunosuppressive Adenosine Pathway.
Mol.Cancer Ther., 20, 2021
2RQQ
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BU of 2rqq by Molmil
Structure of C-terminal region of Cdt1
分子名称: DNA replication factor Cdt1
著者Jee, J.G, Mizuno, T, Kamada, K, Tochio, H, Hiroaki, H, Hanaoka, F, Shirakawa, M.
登録日2009-10-14
公開日2010-03-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and mutagenesis studies of the C-terminal region of licensing factor Cdt1 enable the identification of key residues for binding to replicative helicase Mcm proteins
J.Biol.Chem., 285, 2010
2YLQ
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BU of 2ylq by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
分子名称: 3-[1-[2-(4-METHYLPHENOXY)ETHYL]BENZIMIDAZOL-2-YL]SULFANYLPROPANOIC ACID, ANDROGEN RECEPTOR, SULFATE ION, ...
著者Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
登録日2011-06-04
公開日2011-07-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
2YLO
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BU of 2ylo by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
分子名称: 1-[2-(4-METHYLPHENOXY)ETHYL]-2-(2-PHENOXYETHYLSULFANYL)BENZIMIDAZOLE, ANDROGEN RECEPTOR, SULFATE ION, ...
著者Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
登録日2011-06-04
公開日2011-07-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
2YLP
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BU of 2ylp by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
分子名称: 3-[(2,4-DICHLOROPHENYL)METHYLSULFANYLMETHYL]BENZOIC ACID, ANDROGEN RECEPTOR, SULFATE ION, ...
著者Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
登録日2011-06-04
公開日2011-07-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
3DIP
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BU of 3dip by Molmil
Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
分子名称: SULFATE ION, enolase
著者Bonanno, J.B, Freeman, J, Bain, K.T, Zhang, F, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-20
公開日2008-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
To be Published
3CYJ
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BU of 3cyj by Molmil
Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus
分子名称: GLYCEROL, Mandelate racemase/muconate lactonizing enzyme-like protein, SODIUM ION
著者Bonanno, J.B, Freeman, J, Bain, K.T, Zhang, F, Bravo, J, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-04-25
公開日2008-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus.
To be Published
9C0J
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BU of 9c0j by Molmil
Structure of the elongating DRT2 reverse transcriptase in complex with its non-coding RNA and dNTPs
分子名称: DRT2 ncRNA, MAGNESIUM ION, POTASSIUM ION, ...
著者Wilkinson, M.E, Zhang, F.
登録日2024-05-25
公開日2024-09-04
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Phage-triggered reverse transcription assembles a toxic repetitive gene from a noncoding RNA.
Science, 386, 2024
5ZZO
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BU of 5zzo by Molmil
Crystal structure of CcpE regulatory domain in complex with citrate from Staphyloccocus aureus
分子名称: CITRATE ANION, LysR family transcriptional regulator
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2018-06-04
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Analysis of the Citrate-Responsive Mechanism of the Regulatory Domain of Catabolite Control Protein E from Staphylococcus aureus
Biochemistry, 57, 2018
5Z72
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Crystal structure of CcpC regulatory domain in complex with citrate from Bacillus amyloliquefaciens
分子名称: CITRATE ANION, CcpC, SODIUM ION
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2018-01-26
公開日2018-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insights from the crystal structures of a catabolite control protein C on citrate-responsive mechanism
To Be Published
4U63
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Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, DNA photolyase, ...
著者Scheerer, P, Zhang, F, Kalms, J, von Stetten, D, Krauss, N, Oberpichler, I, Lamparter, T.
登録日2014-07-26
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways.
J.Biol.Chem., 290, 2015
9B6G
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BU of 9b6g by Molmil
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist AMTB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, N-(3-aminopropyl)-2-[(3-methylphenyl)methoxy]-N-[(thiophen-2-yl)methyl]benzamide, ...
著者Yin, Y, Park, C.-G, Zhang, F, Fedor, J, Feng, S, Suo, Y, Im, W, Lee, S.-Y.
登録日2024-03-25
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Mechanisms of sensory adaptation and inhibition of the cold and menthol receptor TRPM8.
Sci Adv, 10, 2024

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件を2024-10-16に公開中

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