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PDB: 147 件

6ON0
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STRUCTURE OF N15 CRO COMPLEXED WITH CONSENSUS OPERATOR DNA
分子名称: DNA (5'-D(*TP*TP*TP*AP*TP*AP*GP*CP*TP*AP*GP*CP*TP*AP*TP*AP*A)-3'), Gp39
著者Hall, B.M, Roberts, S.A, Cordes, M.H.J.
登録日2019-04-19
公開日2019-05-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Extreme divergence between one-to-one orthologs: the structure of N15 Cro bound to operator DNA and its relationship to the lambda Cro complex.
Nucleic Acids Res., 47, 2019
3BD1
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Structure of the Cro protein from putative prophage element Xfaso 1 in Xylella fastidiosa strain Ann-1
分子名称: CHLORIDE ION, Cro protein, GLYCEROL, ...
著者Hall, B.M, Roberts, S.A, Montfort, W.R, Cordes, M.H.
登録日2007-11-13
公開日2008-03-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Transitive homology-guided structural studies lead to discovery of Cro proteins with 40% sequence identity but different folds
Proc.Natl.Acad.Sci.Usa, 105, 2008
2OVG
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Lambda Cro Q27P/A29S/K32Q triple mutant at 1.35 A in space group P3221
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Phage lambda Cro, SULFATE ION
著者Hall, B.M, Heroux, A, Roberts, S.A, Cordes, M.H.
登録日2007-02-13
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Two structures of a lambda Cro variant highlight dimer flexibility but disfavor major dimer distortions upon specific binding of cognate DNA.
J.Mol.Biol., 375, 2008
7M1L
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Crystal structure of Pseudomonas aeruginosa ClpP2
分子名称: ATP-dependent Clp protease proteolytic subunit, PHOSPHATE ION
著者Hall, B.M, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2021-03-13
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
2ECS
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Lambda Cro mutant Q27P/A29S/K32Q at 1.4 A in space group C2
分子名称: ACETATE ION, CHLORIDE ION, LITHIUM ION, ...
著者Hall, B.M, Roberts, S.A, Cordes, M.H.
登録日2007-02-14
公開日2008-01-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Two structures of a lambda Cro variant highlight dimer flexibility but disfavor major dimer distortions upon specific binding of cognate DNA.
J.Mol.Biol., 375, 2008
2FVV
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Human Diphosphoinositol polyphosphate phosphohydrolase 1
分子名称: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, INOSITOL HEXAKISPHOSPHATE, ...
著者Hallberg, B.M, Kursula, P, Ogg, D, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Persson, C, Structural Genomics Consortium (SGC)
登録日2006-01-31
公開日2006-03-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of human diphosphoinositol phosphatase 1
Proteins, 77, 2009
7A29
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Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Neutralising sybody (Sb23), ...
著者Hallberg, B.M, Das, H.
登録日2020-08-16
公開日2020-10-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2.
Nat Commun, 11, 2020
6ZXN
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Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing nanobodies (Ty1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Ty1, ...
著者Hallberg, B.M, Das, H.
登録日2020-07-30
公開日2020-09-23
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献An alpaca nanobody neutralizes SARS-CoV-2 by blocking receptor interaction.
Nat Commun, 11, 2020
7B17
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SARS-CoV-spike RBD bound to two neutralising nanobodies.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SARS-CoV-2 neutralizing biparatopic nanobody VE,nanobody E from Lama glama,SARS-CoV-2 neutralizing biparatopic nanobody VE,nanobody E from Lama glama, Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2020-11-23
公開日2021-02-10
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (4.01 Å)
主引用文献Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Science, 371, 2021
7A25
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BU of 7a25 by Molmil
Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Hallberg, B.M, Das, H.
登録日2020-08-16
公開日2020-11-25
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2.
Nat Commun, 11, 2020
7B14
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Nanobody E bound to Spike-RBD in a localized reconstruction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2, Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2020-11-23
公開日2021-04-28
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Science, 371, 2021
7B18
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SARS-CoV-spike bound to two neutralising nanobodies
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2 VHH E, ...
著者Hallberg, B.M, Das, H.
登録日2020-11-24
公開日2021-04-28
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape.
Science, 371, 2021
8A96
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SARS Cov2 Spike RBD in complex with Fab47
分子名称: Fab47 Heavy chain (variable domain), Fab47 Light chain (variable domain), Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2022-06-27
公開日2023-05-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies.
Immunity, 56, 2023
8A99
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BU of 8a99 by Molmil
SARS Cov2 Spike in 1-up conformation complex with Fab47
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab47 (Heavy chain variable domain), ...
著者Hallberg, B.M, Das, H.
登録日2022-06-28
公開日2023-05-10
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies.
Immunity, 56, 2023
8A94
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BU of 8a94 by Molmil
SARS CoV2 Spike in the 2-up state in complex with Fab47.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab47 (Heavy chain Variable domain), ...
著者Hallberg, B.M, Das, H.
登録日2022-06-27
公開日2023-05-03
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies.
Immunity, 56, 2023
8A95
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BU of 8a95 by Molmil
SARS Cov2 Spike RBD in complex with Fab47
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab47 (Heavy chain variable domain), ...
著者Hallberg, B.M, Das, H.
登録日2022-06-27
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies.
Immunity, 56, 2023
3BXD
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BU of 3bxd by Molmil
Crystal structure of Mouse Myo-inositol oxygenase (re-refined)
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, FE (III) ION, FORMIC ACID, ...
著者Hallberg, B.M.
登録日2008-01-13
公開日2008-02-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and biophysical characterization of human myo-inositol oxygenase.
J.Biol.Chem., 283, 2008
7KSG
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BU of 7ksg by Molmil
SARS-CoV-2 spike in complex with nanobodies E
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2 glycoprotein, Spike glycoprotein
著者Hallberg, B.M, Das, H.
登録日2020-11-22
公開日2021-01-20
最終更新日2021-06-30
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape.
Science, 371, 2021
2A98
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Crystal structure of the catalytic domain of human inositol 1,4,5-trisphosphate 3-kinase C
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate 3-kinase C
著者Hallberg, B.M, Ogg, D, Ehn, M, Graslund, S, Hammarstrom, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Persson, C, Sagemark, J, Schuler, H, Stenmark, P, Thorsell, A.-G, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Structural Genomics Consortium (SGC)
登録日2005-07-11
公開日2005-07-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of the catalytic domain of human inositol 1,4,5-trisphosphate 3-kinase C
To be Published
1D7D
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CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CADMIUM ION, CELLOBIOSE DEHYDROGENASE, ...
著者Hallberg, B.M, Bergfors, T, Backbro, K, Divne, C.
登録日1999-10-16
公開日2000-10-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A new scaffold for binding haem in the cytochrome domain of the extracellular flavocytochrome cellobiose dehydrogenase.
Structure Fold.Des., 8, 2000
1D7C
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CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CADMIUM ION, CELLOBIOSE DEHYDROGENASE, ...
著者Hallberg, B.M, Bergfors, T, Backbro, K, Divne, C.
登録日1999-10-16
公開日2000-10-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A new scaffold for binding haem in the cytochrome domain of the extracellular flavocytochrome cellobiose dehydrogenase.
Structure Fold.Des., 8, 2000
1D7B
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BU of 1d7b by Molmil
CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CADMIUM ION, CELLOBIOSE DEHYDROGENASE, ...
著者Hallberg, B.M, Bergfors, T, Backbro, K, Divne, C.
登録日1999-10-16
公開日2000-10-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A new scaffold for binding haem in the cytochrome domain of the extracellular flavocytochrome cellobiose dehydrogenase.
Structure Fold.Des., 8, 2000
1KDG
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Crystal structure of the flavin domain of cellobiose dehydrogenase
分子名称: 2-(ETHYLMERCURI-THIO)-BENZOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hallberg, B.M, Henriksson, G, Pettersson, G, Divne, C.
登録日2001-11-13
公開日2002-11-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of the Flavoprotein Domain of the Extracellular Flavocytochrome Cellobiose Dehydrogenase
J.Mol.Biol., 315, 2002
1TT0
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Crystal Structure of Pyranose 2-Oxidase
分子名称: ACETATE ION, DODECAETHYLENE GLYCOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hallberg, B.M, Leitner, C, Haltrich, D, Divne, C.
登録日2004-06-21
公開日2005-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the 270 kDa homotetrameric lignin-degrading enzyme pyranose 2-oxidase
J.Mol.Biol., 341, 2004
2FIM
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Structure of the C-terminal domain of Human Tubby-like protein 1
分子名称: 3-(N,N-DIMETHYLOCTYLAMMONIO)PROPANESULFONATE, SULFATE ION, Tubby related protein 1
著者Hallberg, B.M, Ogg, D, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Kursula, P, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Persson, C.
登録日2005-12-29
公開日2006-02-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the C-terminal domain of Human Tubby-like protein 1
To be published

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件を2024-07-17に公開中

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