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PDB: 516 results

5ZAP
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BU of 5zap by Molmil
Atomic structure of the herpes simplex virus type 2 B-capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Yuan, S, Wang, J.L, Zhu, D.J, Wang, N, Gao, Q, Chen, W.Y, Tang, H, Wang, J.Z, Zhang, X.Z, Liu, H.R, Rao, Z.H, Wang, X.X.
Deposit date:2018-02-08
Release date:2018-04-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of a herpesvirus capsid at 3.1 angstrom.
Science, 360, 2018
8TYE
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BU of 8tye by Molmil
Lassa GPC (strain Josiah) bound to rabbit polyclonal fusion-peptide-targeting antibody FP-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Perrett, H.R, Brouwer, P.J.M, Ward, A.B.
Deposit date:2023-08-25
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Defining bottlenecks and opportunities for Lassa virus neutralization by structural profiling of vaccine-induced polyclonal antibody responses.
Cell Rep, 43, 2024
8TYC
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BU of 8tyc by Molmil
Lassa GPC (strain Josiah) bound to rabbit polyclonal base-targeting antibody Base-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Perrett, H.R, Brouwer, P.J.M, Ward, A.B.
Deposit date:2023-08-24
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mapping of vaccine-induced humoral responses to the Lassa virus glycoprotein reveals off-target and immunodominant responses
To Be Published
6ZTQ
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BU of 6ztq by Molmil
Cryo-EM structure of respiratory complex I from Mus musculus inhibited by piericidin A at 3.0 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J.
Deposit date:2020-07-20
Release date:2020-10-21
Last modified:2020-10-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of inhibitor-bound mammalian complex I.
Nat Commun, 11, 2020
7A8W
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BU of 7a8w by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with an engineered HMA domain of Pikp-1 from rice (Oryza sativa)
Descriptor: NBS-LRR class disease resistance protein, Uncharacterized protein
Authors:Maidment, J.H.R, De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
Deposit date:2020-08-31
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface.
Plos Pathog., 17, 2021
7A05
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BU of 7a05 by Molmil
NMR structure of D3-D4 domains of Vibrio vulnificus ribosomal protein S1
Descriptor: 30S ribosomal protein S1
Authors:Qureshi, N.S, Matzel, T, Cetiner, E.C, Schnieders, S, Jonker, H.R.A, Schwalbe, H, Fuertig, B.
Deposit date:2020-08-06
Release date:2021-06-23
Last modified:2024-01-17
Method:SOLUTION NMR
Cite:NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs.
Nucleic Acids Res., 49, 2021
6ZSK
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BU of 6zsk by Molmil
Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO complex
Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2020-07-15
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:to be published
To Be Published
7AHD
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BU of 7ahd by Molmil
OpuA (E190Q) occluded
Descriptor: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7AK6
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BU of 7ak6 by Molmil
Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yin, Z, Bridges, H.R, Grba, D, Hirst, J.
Deposit date:2020-09-29
Release date:2021-02-03
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for a complex I mutation that blocks pathological ROS production.
Nat Commun, 12, 2021
7AHH
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BU of 7ahh by Molmil
OpuA inhibited inward-facing, SBD docked
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ...
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZQZ
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BU of 7zqz by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-03
Release date:2023-05-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZSW
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BU of 7zsw by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO Complex
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AHC
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BU of 7ahc by Molmil
OpuA apo inward-facing
Descriptor: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZSX
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BU of 7zsx by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex
Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AHE
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BU of 7ahe by Molmil
OpuA inhibited inward facing
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZRX
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BU of 7zrx by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous State
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZSV
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BU of 7zsv by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous Form
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-09
Release date:2023-05-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZS4
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BU of 7zs4 by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-06
Release date:2023-05-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZRW
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BU of 7zrw by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZVZ
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BU of 7zvz by Molmil
Cytochrome c prime beta from Methylococcus capsulatus (Bath): Chemically Reduced Ferrous Form
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-17
Release date:2023-05-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZTI
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BU of 7zti by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex
Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-05-10
Release date:2023-05-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZPS
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BU of 7zps by Molmil
Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex
Descriptor: Cytochrome c, GLYCEROL, HEME C, ...
Authors:Adams, H.R, Hough, M.A.
Deposit date:2022-04-28
Release date:2023-05-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AK5
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BU of 7ak5 by Molmil
Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yin, Z, Bridges, H.R, Grba, D, Hirst, J.
Deposit date:2020-09-29
Release date:2021-02-03
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Structural basis for a complex I mutation that blocks pathological ROS production.
Nat Commun, 12, 2021
7B1I
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BU of 7b1i by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with the HMA domain of OsHIPP19 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, OSIGBa0128P10.9 protein
Authors:Maidment, J.H.R, Franceschetti, M, Banfield, M.J.
Deposit date:2020-11-24
Release date:2021-02-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multiple variants of the fungal effector AVR-Pik bind the HMA domain of the rice protein OsHIPP19, providing a foundation to engineer plant defense.
J.Biol.Chem., 296, 2021
6ZR2
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BU of 6zr2 by Molmil
Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J.
Deposit date:2020-07-10
Release date:2020-10-21
Last modified:2020-10-28
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of inhibitor-bound mammalian complex I.
Nat Commun, 11, 2020

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数据于2024-11-06公开中

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