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PDB: 516 件

5ZAP
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Atomic structure of the herpes simplex virus type 2 B-capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Yuan, S, Wang, J.L, Zhu, D.J, Wang, N, Gao, Q, Chen, W.Y, Tang, H, Wang, J.Z, Zhang, X.Z, Liu, H.R, Rao, Z.H, Wang, X.X.
登録日2018-02-08
公開日2018-04-18
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of a herpesvirus capsid at 3.1 angstrom.
Science, 360, 2018
8TYE
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Lassa GPC (strain Josiah) bound to rabbit polyclonal fusion-peptide-targeting antibody FP-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Perrett, H.R, Brouwer, P.J.M, Ward, A.B.
登録日2023-08-25
公開日2024-09-11
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Defining bottlenecks and opportunities for Lassa virus neutralization by structural profiling of vaccine-induced polyclonal antibody responses.
Cell Rep, 43, 2024
8TYC
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Lassa GPC (strain Josiah) bound to rabbit polyclonal base-targeting antibody Base-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Perrett, H.R, Brouwer, P.J.M, Ward, A.B.
登録日2023-08-24
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mapping of vaccine-induced humoral responses to the Lassa virus glycoprotein reveals off-target and immunodominant responses
To Be Published
6ZTQ
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Cryo-EM structure of respiratory complex I from Mus musculus inhibited by piericidin A at 3.0 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J.
登録日2020-07-20
公開日2020-10-21
最終更新日2020-10-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of inhibitor-bound mammalian complex I.
Nat Commun, 11, 2020
7A8W
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Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with an engineered HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称: NBS-LRR class disease resistance protein, Uncharacterized protein
著者Maidment, J.H.R, De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
登録日2020-08-31
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface.
Plos Pathog., 17, 2021
7A05
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BU of 7a05 by Molmil
NMR structure of D3-D4 domains of Vibrio vulnificus ribosomal protein S1
分子名称: 30S ribosomal protein S1
著者Qureshi, N.S, Matzel, T, Cetiner, E.C, Schnieders, S, Jonker, H.R.A, Schwalbe, H, Fuertig, B.
登録日2020-08-06
公開日2021-06-23
最終更新日2024-01-17
実験手法SOLUTION NMR
主引用文献NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs.
Nucleic Acids Res., 49, 2021
6ZSK
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Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO complex
分子名称: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2020-07-15
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献to be published
To Be Published
7AHD
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OpuA (E190Q) occluded
分子名称: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
登録日2020-09-24
公開日2020-11-25
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7AK6
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Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Yin, Z, Bridges, H.R, Grba, D, Hirst, J.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural basis for a complex I mutation that blocks pathological ROS production.
Nat Commun, 12, 2021
7AHH
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OpuA inhibited inward-facing, SBD docked
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ...
著者Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
登録日2020-09-24
公開日2020-11-25
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZQZ
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F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex
分子名称: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-03
公開日2023-05-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZSW
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F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO Complex
分子名称: Cytochrome c, GLYCEROL, HEME C, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-09
公開日2023-05-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AHC
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OpuA apo inward-facing
分子名称: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
著者Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
登録日2020-09-24
公開日2020-11-25
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZSX
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BU of 7zsx by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex
分子名称: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-09
公開日2023-05-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AHE
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BU of 7ahe by Molmil
OpuA inhibited inward facing
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
著者Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
登録日2020-09-24
公開日2020-11-25
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7ZRX
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BU of 7zrx by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous State
分子名称: Cytochrome c, GLYCEROL, HEME C, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-05
公開日2023-05-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZSV
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BU of 7zsv by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous Form
分子名称: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-09
公開日2023-05-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZS4
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BU of 7zs4 by Molmil
F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
分子名称: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-06
公開日2023-05-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZRW
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F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath)
分子名称: Cytochrome c, GLYCEROL, HEME C, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-05
公開日2023-05-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZVZ
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BU of 7zvz by Molmil
Cytochrome c prime beta from Methylococcus capsulatus (Bath): Chemically Reduced Ferrous Form
分子名称: Cytochrome c, GLYCEROL, HEME C, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-17
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZTI
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BU of 7zti by Molmil
F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex
分子名称: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ...
著者Adams, H.R, Hough, M.A.
登録日2022-05-10
公開日2023-05-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7ZPS
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Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex
分子名称: Cytochrome c, GLYCEROL, HEME C, ...
著者Adams, H.R, Hough, M.A.
登録日2022-04-28
公開日2023-05-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors.
J.Biol.Chem., 299, 2023
7AK5
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Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Yin, Z, Bridges, H.R, Grba, D, Hirst, J.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Structural basis for a complex I mutation that blocks pathological ROS production.
Nat Commun, 12, 2021
7B1I
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Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with the HMA domain of OsHIPP19 from rice (Oryza sativa)
分子名称: AVR-Pik protein, OSIGBa0128P10.9 protein
著者Maidment, J.H.R, Franceschetti, M, Banfield, M.J.
登録日2020-11-24
公開日2021-02-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple variants of the fungal effector AVR-Pik bind the HMA domain of the rice protein OsHIPP19, providing a foundation to engineer plant defense.
J.Biol.Chem., 296, 2021
6ZR2
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Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J.
登録日2020-07-10
公開日2020-10-21
最終更新日2020-10-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of inhibitor-bound mammalian complex I.
Nat Commun, 11, 2020

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件を2024-11-06に公開中

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