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PDB: 81 results

5BR2
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BU of 5br2 by Molmil
Structure of bacteriorhodopsin crystallized from ND-MSP1
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Nikolaev, M, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-05-29
Release date:2016-09-14
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Integral Membrane Proteins Can Be Crystallized Directly from Nanodiscs
Cryst.Growth Des., 17, 2017
5BR5
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BU of 5br5 by Molmil
Structure of bacteriorhodopsin crystallized from ND-MSP1E3D1
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Nikolaev, M, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-05-29
Release date:2016-09-14
Last modified:2017-05-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Integral Membrane Proteins Can Be Crystallized Directly from Nanodiscs
Cryst.Growth Des., 17, 2017
5JJJ
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BU of 5jjj by Molmil
Structure of the SRII/HtrII Complex in P64 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-24
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
8AFK
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BU of 8afk by Molmil
Structure of iRFP variant C15S/N136R/V256C in complex with phycocyanobilin
Descriptor: Near-infrared fluorescent protein, PHYCOCYANOBILIN
Authors:Remeeva, A, Kovalev, K, Gushchin, I, Fonin, A, Turoverov, K, Stepanenko, O.
Deposit date:2022-07-18
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Structure of iRFP variant C15S/N136R/V256C in complex with phycocyanobilin
To Be Published
4OV0
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BU of 4ov0 by Molmil
Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Polovinkin, V, Gushchin, I, Sintsov, M, Round, E, Balandin, T, Chervakov, P, Schevchenko, V, Utrobin, P, Popov, A, Borshchevskiy, V, Mishin, A, Kuklin, A, Willbold, D, Popot, J.L, Gordeliy, V.
Deposit date:2014-02-19
Release date:2014-10-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.
J.Membr.Biol., 247, 2014
4PXK
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BU of 4pxk by Molmil
Crystal structure of Haloarcula marismortui bacteriorhodopsin I D94N mutant
Descriptor: Bacteriorhodopsin, EICOSANE, RETINAL, ...
Authors:Shevchenko, V, Gushchin, I, Polovinkin, V, Gordeliy, V.
Deposit date:2014-03-24
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Escherichia coli-Expressed Haloarcula marismortui Bacteriorhodopsin I in the Trimeric Form.
Plos One, 9, 2014
7AB7
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BU of 7ab7 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) I52T Q148K variant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase, ...
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-09-06
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
7AB6
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BU of 7ab6 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) I52T variant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase, ...
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-09-06
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
4XA7
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BU of 4xa7 by Molmil
Soluble part of holo NqrC from V. harveyi
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit C
Authors:Borshchevskiy, V, Round, E, Bertsova, Y, Polovinkin, V, Gushchin, I, Mishin, A, Kovalev, K, Kachalova, G, Popov, A, Bogachev, A, Gordeliy, V.
Deposit date:2014-12-12
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural and Functional Investigation of Flavin Binding Center of the NqrC Subunit of Sodium-Translocating NADH:Quinone Oxidoreductase from Vibrio harveyi.
Plos One, 10, 2015
4XXJ
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BU of 4xxj by Molmil
Crystal Structure of Escherichia coli-Expressed Halobacterium salinarum Bacteriorhodopsin in the Trimeric Form
Descriptor: Bacteriorhodopsin, EICOSANE, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
Authors:Bratanov, D, Balandin, T, Round, E, Gushchin, I, Gordeliy, V.
Deposit date:2015-01-30
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An Approach to Heterologous Expression of Membrane Proteins. The Case of Bacteriorhodopsin.
Plos One, 10, 2015
5JRF
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BU of 5jrf by Molmil
Crystal structure of the light-driven sodium pump KR2 bound with iodide ions
Descriptor: EICOSANE, IODIDE ION, Sodium pumping rhodopsin
Authors:Melnikov, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gushchin, I, Popov, A, Gordeliy, V.
Deposit date:2016-05-06
Release date:2017-05-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
5JSI
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BU of 5jsi by Molmil
Structure of membrane protein
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Melnikov, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gushchin, I, Popov, A, Gordeliy, V.
Deposit date:2016-05-08
Release date:2017-05-31
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
6YXB
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BU of 6yxb by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148K variant (space group P21)
Descriptor: FLAVIN MONONUCLEOTIDE, Multi-sensor hybrid histidine kinase, SULFATE ION
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
6YX6
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BU of 6yx6 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148K variant (no morpholine)
Descriptor: FLAVIN MONONUCLEOTIDE, Multi-sensor hybrid histidine kinase, SULFATE ION
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
6YX4
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BU of 6yx4 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148K variant with morpholine
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase, ...
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
7YXA
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BU of 7yxa by Molmil
XFEL crystal structure of the human sphingosine 1 phosphate receptor 5 in complex with ONO-5430608
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[6-(2-naphthalen-1-ylethoxy)-2,3,4,5-tetrahydro-1H-3-benzazepin-3-ium-3-yl]butanoic acid, ...
Authors:Lyapina, E, Marin, E, Gusach, A, Orekhov, P, Gerasimov, A, Luginina, A, Vakhrameev, D, Ergasheva, M, Kovaleva, M, Khusainov, G, Khorn, P, Shevtsov, M, Kovalev, K, Okhrimenko, I, Bukhdruker, S, Popov, P, Hu, H, Weierstall, U, Liu, W, Cho, Y, Gushchin, I, Rogachev, A, Bourenkov, G, Park, S, Park, G, Huyn, H.J, Park, J, Gordeliy, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
Deposit date:2022-02-15
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for receptor selectivity and inverse agonism in S1P 5 receptors.
Nat Commun, 13, 2022
5JJN
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BU of 5jjn by Molmil
Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-24
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
5JJF
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BU of 5jjf by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape) - M state
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
5JJE
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BU of 5jje by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
6YWI
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BU of 6ywi by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148E variant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-29
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021
6YWH
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BU of 6ywh by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148D variant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, Multi-sensor hybrid histidine kinase, ...
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-29
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021
6YWQ
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BU of 6ywq by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148H variant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021
6YXC
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BU of 6yxc by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148R variant
Descriptor: FLAVIN MONONUCLEOTIDE, Multi-sensor hybrid histidine kinase, SODIUM ION
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021
6YWR
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BU of 6ywr by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148H variant (space group C2)
Descriptor: FLAVIN MONONUCLEOTIDE, Multi-sensor hybrid histidine kinase, SULFATE ION
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-30
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021
6YWG
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BU of 6ywg by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148N variant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Multi-sensor hybrid histidine kinase
Authors:Remeeva, A, Nazarenko, V, Kovalev, K, Gushchin, I.
Deposit date:2020-04-29
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into the mechanisms of light-oxygen-voltage domain color tuning from a set of high-resolution X-ray structures.
Proteins, 2021

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