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PDB: 87 results

5XSP
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BU of 5xsp by Molmil
The catalytic domain of GdpP with 5'-pApA
Descriptor: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-15
Release date:2018-01-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.146 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XT3
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BU of 5xt3 by Molmil
The catalytic domain of GdpP with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-16
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XSI
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BU of 5xsi by Molmil
The catalytic domain of GdpP
Descriptor: MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-14
Release date:2018-01-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XLY
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BU of 5xly by Molmil
Crystal structure of CheR1 in complex with c-di-GMP-bound MapZ
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Chemotaxis protein methyltransferase 1, Cyclic diguanosine monophosphate-binding protein PA4608
Authors:Yuan, Z, Zhu, Y, Gu, L.
Deposit date:2017-05-12
Release date:2017-08-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.763 Å)
Cite:Structural basis for the regulation of chemotaxis by MapZ in the presence of c-di-GMP
Acta Crystallogr D Struct Biol, 73, 2017
5XSN
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BU of 5xsn by Molmil
The catalytic domain of GdpP with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-14
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XBW
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BU of 5xbw by Molmil
The structure of BrlR
Descriptor: Probable transcriptional regulator
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-21
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.109 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
5XBI
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BU of 5xbi by Molmil
The structure of BrlR-C domain bound to 3-amino-2-phenazino(a pyocyanin analog)
Descriptor: 3-azanylphenazin-2-ol, DI(HYDROXYETHYL)ETHER, Probable transcriptional regulator
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-17
Release date:2018-03-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
5XBT
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BU of 5xbt by Molmil
The structure of BrlR bound to c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-21
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
7ETS
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BU of 7ets by Molmil
Crystal structure of crp protein from Gardnerella Vaginalis
Descriptor: Crp/Fnr family transcriptional regulator, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Dong, H.J, Wang, S, Zhang, J.M, Gu, L.
Deposit date:2021-05-13
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of crp protein from Gardnerella Vaginalis
To Be Published
2FP3
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BU of 2fp3 by Molmil
Crystal structure of the Drosophila initiator caspase Dronc
Descriptor: Caspase Nc
Authors:Yan, N, Gu, L, Shi, Y.
Deposit date:2006-01-15
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and activation mechanism of the Drosophila initiator caspase dronc
J.Biol.Chem., 281, 2006
2HKA
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BU of 2hka by Molmil
Crystal structure of bovine NPC2 and cholesterol sulfate complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHOLEST-5-EN-3-YL HYDROGEN SULFATE, ...
Authors:Xu, S, Gu, L, Benoff, B, Stock, A.M.
Deposit date:2006-07-03
Release date:2007-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural Basis of Sterol Binding by NPC2, a Lysosomal Protein Deficient in Niemann-Pick Type C2 Disease
J.Biol.Chem., 282, 2007
5GZ2
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BU of 5gz2 by Molmil
luciferase complex with 7-cy-L
Descriptor: (4S)-2-[6-(azepan-1-yl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid, Luciferin 4-monooxygenase
Authors:Su, J, Wang, F, Gu, L.
Deposit date:2016-09-26
Release date:2017-09-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:luciferase complex with 7-cy-L
To Be Published
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