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PDB: 99 件
5EWT
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BU of 5ewt by Molmil
Crystal structure of ExoIII endonuclease from Sulfolobus islandicus
分子名称: Exodeoxyribonuclease III Xth
著者Yan, Z, Yuan, Z.L, Gu, L.C, Shen, Y.L.
登録日2015-11-21
公開日2016-11-23
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of ExoIII endonuclease from Sulfolobus islandicus
To Be Published
5ZO4
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BU of 5zo4 by Molmil
inactive state of the nuclease
分子名称: MANGANESE (II) ION, Putative 3'-5' exonuclease family protein, SULFATE ION
著者Yuan, Z.L, Gu, L.C.
登録日2018-04-12
公開日2019-04-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Front Microbiol, 9, 2018
5ZO3
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BU of 5zo3 by Molmil
apo form of the nuclease
分子名称: 1,2-ETHANEDIOL, Putative 3'-5' exonuclease family protein, SULFATE ION
著者Yuan, Z.L, Gu, L.C.
登録日2018-04-12
公開日2019-04-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.493 Å)
主引用文献NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Front Microbiol, 9, 2018
6A06
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BU of 6a06 by Molmil
Structure of pSTING complex
分子名称: SULFATE ION, Stimulator of interferon genes protein, cGAMP
著者Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
登録日2018-06-05
公開日2019-06-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
6A04
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BU of 6a04 by Molmil
Structure of pSTING complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, Stimulator of interferon genes protein
著者Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
登録日2018-06-05
公開日2019-06-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
4ZXD
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BU of 4zxd by Molmil
Crystal Structure of hydroquinone 1,2-dioxygenase PnpCD
分子名称: Hydroquinone dioxygenase large subunit, Hydroquinone dioxygenase small subunit
著者Liu, S, Su, T, Zhang, C, Gu, L.
登録日2015-05-20
公開日2015-09-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Crystal Structure of PnpCD, a Two-subunit Hydroquinone 1,2-Dioxygenase, Reveals a Novel Structural Class of Fe2+-dependent Dioxygenases.
J.Biol.Chem., 290, 2015
2NRF
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BU of 2nrf by Molmil
Crystal Structure of GlpG, a Rhomboid family intramembrane protease
分子名称: Protein GlpG
著者Wu, Z, Yan, N, Feng, L, Yan, H, Gu, L, Shi, Y.
登録日2006-11-02
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.
Nat.Struct.Mol.Biol., 13, 2006
3O72
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BU of 3o72 by Molmil
Crystal structure of EfeB in complex with heme
分子名称: OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, Redox component of a tripartite ferrous iron transporter
著者Liu, X, Du, Q, Wang, Z, Zhu, D, Huang, Y, Li, N, Xu, S, Gu, L.
登録日2010-07-30
公開日2011-03-16
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure and biochemical features of EfeB/YcdB from Escherichia coli O157: ASP235 plays divergent roles in different enzyme-catalyzed processes
J.Biol.Chem., 286, 2011
5HH9
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BU of 5hh9 by Molmil
Structure of PvdN from Pseudomonas aeruginosa
分子名称: PYRIDOXAL-5'-PHOSPHATE, PvdN
著者Xia, H, Bai, G, Liu, S, Li, N, Xu, S, Chen, K, Yao, Q, Gu, L.
登録日2016-01-10
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural and Biochemical Characterization of a Novel L-Cystine Desulfurase involved in the biosynthesis of the major siderophore pyoverdine in Pseudomonas aeruginosa
To Be Published
5HXG
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STM1697-FlhD complex
分子名称: Flagellar transcriptional regulator FlhD, Uncharacterized protein STM1697
著者Li, B, Yuan, Z, Qin, L, Gu, L.
登録日2016-01-30
公開日2017-02-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Crystal structure of STM1697-FlhD complex
To Be Published
5HXF
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Crystal structure of 3C protease from a mild Human enterovirus 71 in complex with rupintrivir
分子名称: 3C protease, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER, SULFATE ION
著者Li, B, Yuan, Z, Qin, L, Gu, L.
登録日2016-01-30
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal structure of 3C protease from a mild Human enterovirus 71 in complex with rupintrivir
To Be Published
3TEF
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BU of 3tef by Molmil
Crystal Structure of the Periplasmic Catecholate-Siderophore Binding Protein VctP from Vibrio Cholerae
分子名称: Iron(III) ABC transporter, periplasmic iron-compound-binding protein
著者Liu, X, Wang, Z, Liu, S, Li, N, Chen, Y, Zhu, C, Zhu, D, Wei, T, Huang, Y, Xu, S, Gu, L.
登録日2011-08-13
公開日2012-08-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Crystal structure of periplasmic catecholate-siderophore binding protein VctP from Vibrio cholerae at 1.7 A resolution
Febs Lett., 586, 2012
3TB4
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BU of 3tb4 by Molmil
Crystal structure of the ISC domain of VibB
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Liu, S, Zhang, C, Niu, B, Li, N, Liu, M, Wei, T, Zhu, D, Xu, S, Gu, L.
登録日2011-08-05
公開日2012-08-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insight into the ISC domain of VibB from Vibrio cholerae at atomic resolution: a snapshot just before the enzymatic reaction
Acta Crystallogr.,Sect.D, 68, 2012
4GO3
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BU of 4go3 by Molmil
Crystal structure of PnpE from Pseudomonas sp. WBC-3
分子名称: Putative gamma-hydroxymuconic semialdehyde dehydrogenase
著者Su, J, Zhang, C, Liu, S, Zhu, D, Gu, L.
登録日2012-08-18
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Crystal structure of PnpE from Pseudomonas sp. WBC-3
To be Published
4GO4
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Crystal structure of PnpE in complex with Nicotinamide adenine dinucleotide
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative gamma-hydroxymuconic semialdehyde dehydrogenase
著者Su, J, Zhang, C, Liu, S, Zhu, D, Gu, L.
登録日2012-08-18
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.099 Å)
主引用文献Crystal structure of PnpE in complex with Nicotinamide adenine dinucleotide
To be Published
3TG2
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BU of 3tg2 by Molmil
Crystal structure of the ISC domain of VibB in complex with isochorismate
分子名称: (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, TRIETHYLENE GLYCOL, Vibriobactin-specific isochorismatase
著者Liu, S, Zhang, C, Niu, B, Li, N, Liu, X, Liu, M, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
登録日2011-08-17
公開日2012-08-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.101 Å)
主引用文献Structural insight into the ISC domain of VibB from Vibrio cholerae at atomic resolution: a snapshot just before the enzymatic reaction
Acta Crystallogr.,Sect.D, 68, 2012
3TKL
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BU of 3tkl by Molmil
Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila
分子名称: GUANOSINE-5'-TRIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
著者Cheng, W, Yin, K, Lu, D, Li, B, Zhu, D, Chen, Y, Zhang, H, Xu, S, Chai, J, Gu, L.
登録日2011-08-27
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.183 Å)
主引用文献Structural insights into a unique Legionella pneumophila effector LidA recognizing both GDP and GTP bound Rab1 in their active state
Plos Pathog., 8, 2012
5XLX
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BU of 5xlx by Molmil
Crystal structure of the C-terminal domain of CheR1 containing SAH
分子名称: Chemotaxis protein methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
著者Yuan, Z, Zhu, Y, Gu, L.
登録日2017-05-12
公開日2017-08-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Structural basis for the regulation of chemotaxis by MapZ in the presence of c-di-GMP
Acta Crystallogr D Struct Biol, 73, 2017
6IYF
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BU of 6iyf by Molmil
Structure of pSTING complex
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, SULFATE ION, Stimulator of interferon genes protein
著者Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
登録日2018-12-15
公開日2019-06-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.764 Å)
主引用文献Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
3PFT
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BU of 3pft by Molmil
Crystal Structure of Untagged C54A Mutant Flavin Reductase (DszD) in Complex with FMN From Mycobacterium goodii
分子名称: FLAVIN MONONUCLEOTIDE, Flavin reductase
著者Li, Q, Xu, P, Ma, C, Gu, L, Liu, X, Zhang, C, Li, N, Su, J, Li, B, Liu, S.
登録日2010-10-29
公開日2011-11-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献The flavin reductase DSZD from a desulfurizing mycobacterium goodii strain: systemic manipulation and investigation based on the crystal structure
To be Published
3R5T
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BU of 3r5t by Molmil
Crystal structure of holo-ViuP
分子名称: (4S,5R)-N-{3-[(2,3-dihydroxybenzoyl)amino]propyl}-2-(2,3-dihydroxyphenyl)-N-[3-({[(4S,5R)-2-(2,3-dihydroxyphenyl)-5-met hyl-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)propyl]-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxamide, 1,2-ETHANEDIOL, ACETIC ACID, ...
著者Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
登録日2011-03-19
公開日2012-02-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
3R5S
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BU of 3r5s by Molmil
Crystal structure of apo-ViuP
分子名称: Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein
著者Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
登録日2011-03-19
公開日2012-02-08
最終更新日2012-05-30
実験手法X-RAY DIFFRACTION (1.791 Å)
主引用文献Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
3SFV
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BU of 3sfv by Molmil
Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila
分子名称: GUANOSINE-5'-DIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
著者Yin, K, Lu, D, Zhu, D, Zhang, H, Li, B, Xu, S, Gu, L.
登録日2011-06-14
公開日2012-04-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural Insights into a Unique Legionella pneumophila Effector LidA Recognizing Both GDP and GTP Bound Rab1 in Their Active State
Plos Pathog., 8, 2012
5XBT
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The structure of BrlR bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Wang, F, Qing, H, Gu, L.
登録日2017-03-21
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
4ZMU
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BU of 4zmu by Molmil
Dcsbis, a diguanylate cyclase from Pseudomonas aeruginosa
分子名称: diguanylate cyclase
著者Chen, Y, Liu, C, Liu, S, Chi, K, Gu, L.
登録日2015-05-04
公開日2016-05-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献crystal structure of Dcsbis from Pseudomonas aeruginosa
To Be Published

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