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PDB: 96 件

7QHY
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Structure of a Kluyveromyces lactis protein involved in RNA decay
分子名称: GLYCEROL, Nonsense-mediated decay protein 4,Nonsense-mediated decay protein 4,Nonsense mediated mRNA decay protein 4 (Nmd4), SULFATE ION
著者Barbarin-Bocahu, I, Graille, M.
登録日2021-12-14
公開日2022-03-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The X-ray crystallography phase problem solved thanks to AlphaFold and RoseTTAFold models: a case-study report.
Acta Crystallogr D Struct Biol, 78, 2022
4QTT
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BU of 4qtt by Molmil
Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (apo-form)
分子名称: 1,2-ETHANEDIOL, DODECAETHYLENE GLYCOL, Multifunctional methyltransferase subunit TRM112, ...
著者Letoquart, J, Huvelle, E, Wacheul, L, Bourgeois, G, Zorbas, C, Graille, M, Heurgue-Hamard, V, Lafontaine, D.L.J.
登録日2014-07-09
公開日2014-12-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional studies of Bud23-Trm112 reveal 18S rRNA N7-G1575 methylation occurs on late 40S precursor ribosomes.
Proc.Natl.Acad.Sci.USA, 111, 2014
8RDD
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BU of 8rdd by Molmil
Crystal structure of Saccharomyces cerevisiae Nmd4 protein involved in nonsense mediated mRNA decay
分子名称: ACETIC ACID, GLYCEROL, Nonsense-mediated decay protein 4
著者Barbarin-Bocahu, I, Graille, M.
登録日2023-12-08
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structure of a yeast protein
To Be Published
8RD3
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Crystal structure of Saccharomyces cerevisiae Nmd4 protein bound to Upf1 helicase domain
分子名称: 1,2-ETHANEDIOL, ATP-dependent helicase NAM7, FORMIC ACID, ...
著者Barbarin-Bocahu, I, Graille, M.
登録日2023-12-07
公開日2024-08-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Structure of a yeast protein complex
To Be Published
4ML3
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BU of 4ml3 by Molmil
X-ray structure of ComE D58A REC domain from Streptococcus pneumoniae
分子名称: Response regulator
著者Boudes, M, Sanchez, D, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
登録日2013-09-06
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural insights into the dimerization of the response regulator ComE from Streptococcus pneumoniae.
Nucleic Acids Res., 42, 2014
4MLD
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BU of 4mld by Molmil
X-ray structure of ComE D58E REC domain from Streptococcus pneumoniae
分子名称: Response regulator
著者Boudes, M, Sanchez, D, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
登録日2013-09-06
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Structural insights into the dimerization of the response regulator ComE from Streptococcus pneumoniae.
Nucleic Acids Res., 42, 2014
6S2W
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BU of 6s2w by Molmil
Structure of S. pombe Erh1, a protein important for meiotic mRNA decay in mitosis and meiosis progression.
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
著者Hazra, D, Graille, M.
登録日2019-06-22
公開日2020-02-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Formation of S. pombe Erh1 homodimer mediates gametogenic gene silencing and meiosis progression.
Sci Rep, 10, 2020
5DCQ
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BU of 5dcq by Molmil
Crystal structure of bacterial adhesin, FNE from Streptococcus equi spp. equi.
分子名称: FORMIC ACID, Fibronectin-binding protein, artificial repeat proteins (alphaREP3)
著者Tiouajni, M, Graille, M, van Tilbeurgh, H.
登録日2015-08-24
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural and functional analysis of the fibronectin-binding protein FNE from Streptococcus equi spp. equi.
FEBS J., 281, 2014
2XGL
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BU of 2xgl by Molmil
The X-ray structure of the Escherichia coli colicin M immunity protein demonstrates the presence of a disulphide bridge, which is functionally essential
分子名称: CADMIUM ION, CHLORIDE ION, COLICIN-M IMMUNITY PROTEIN, ...
著者Gerard, F, Brooks, M.A, Barreteau, H, Touze, T, Graille, M, Bouhss, A, Blanot, D, Tilbeurgh, H.v, Mengin-Lecreulx, D.
登録日2010-06-07
公開日2010-11-17
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-Ray Structure and Site-Directed Mutagenesis Analysis of the Escherichia Coli Colicin M Immunity Protein.
J.Bacteriol., 193, 2011
5LON
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BU of 5lon by Molmil
Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.
分子名称: KLLA0E01827p, KLLA0F23980p
著者Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
登録日2016-08-09
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
5LMF
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BU of 5lmf by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM3 peptide (region 484-500)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-30
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5CM2
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BU of 5cm2 by Molmil
Structure of Y. lipolytica Trm9-Trm112 complex, a methyltransferase modifying U34 in the anticodon loop of some tRNAs
分子名称: TRNA METHYLTRANSFERASE, TRNA METHYLTRANSFERASE ACTIVATOR SUBUNIT, ZINC ION
著者Letoquart, J, van Tran, N, Caroline, V, Aleksandrov, A, Lazar, N, Van Tilbeurgh, H, Liger, D, Graille, M.
登録日2015-07-16
公開日2015-10-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into molecular plasticity in protein complexes from Trm9-Trm112 tRNA modifying enzyme crystal structure.
Nucleic Acids Res., 43, 2015
4AKK
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BU of 4akk by Molmil
Structure of the NasR transcription antiterminator
分子名称: 1,2-ETHANEDIOL, NITRATE REGULATORY PROTEIN
著者Boudes, M, Lazar, N, Graille, M, Durand, D, Gaidenko, T.A, Stewart, V, van Tilbeurgh, H.
登録日2012-02-24
公開日2012-06-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.145 Å)
主引用文献The Structure of the Nasr Transcription Antiterminator Reveals a One-Component System with a Nit Nitrate Receptor Coupled to an Antar RNA-Binding Effector.
Mol.Microbiol., 85, 2012
4CBV
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BU of 4cbv by Molmil
X-ray structure of full-length ComE from Streptococcus pneumoniae.
分子名称: COME
著者Boudes, M, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
登録日2013-10-16
公開日2014-02-12
最終更新日2014-05-14
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献Structural Insights Into the Dimerization of the Response Regulator Come from Streptococcus Pneumoniae.
Nucleic Acids Res., 42, 2014
5LMG
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BU of 5lmg by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM10 peptide (region 954-970)
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA topoisomerase 2-associated protein PAT1, ...
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-30
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LOP
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BU of 5lop by Molmil
Structure of the active form of /K. lactis/ Dcp1-Dcp2-Edc3 decapping complex bound to m7GDP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, KLLA0A11308p, KLLA0E01827p, ...
著者Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
登録日2016-08-09
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
5LM5
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BU of 5lm5 by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM2 peptide (region 435-451)
分子名称: DNA topoisomerase 2-associated protein PAT1, mRNA decapping protein 2
著者Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
登録日2016-07-29
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4JW3
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BU of 4jw3 by Molmil
Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
分子名称: Alpha-helical artificial proteins, Neocarzinostatin
著者Guellouz, A, Valerio-Lepiniec, M, Urvoas, A, Chevrel, A, Graille, M, Fourati-Kammoun, Z, Desmadril, M, van Tilbeurgh, H, Minard, P.
登録日2013-03-27
公開日2013-09-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Selection of Specific Protein Binders for Pre-Defined Targets from an Optimized Library of Artificial Helicoidal Repeat Proteins (alphaRep).
Plos One, 8, 2013
4JW2
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BU of 4jw2 by Molmil
Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
分子名称: 1,2-ETHANEDIOL, A3 artificial protein, bA3-2: binder of A3 protein
著者Guellouz, A, Valerio-Lepiniec, M, Urvoas, A, Chevrel, A, Graille, M, Fourati-Kammoun, Z, Desmadril, M, van Tilbeurgh, H, Minard, P.
登録日2013-03-27
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Selection of Specific Protein Binders for Pre-Defined Targets from an Optimized Library of Artificial Helicoidal Repeat Proteins (alphaRep).
Plos One, 8, 2013
4QTU
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BU of 4qtu by Molmil
Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (SAM bound form)
分子名称: 1,2-ETHANEDIOL, Multifunctional methyltransferase subunit TRM112, Putative methyltransferase BUD23, ...
著者Letoquart, J, Huvelle, E, Wacheul, L, Bourgeois, G, Zorbas, C, Graille, M, Heurgue-Hamard, V, Lafontaine, D.L.J.
登録日2014-07-09
公開日2014-12-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.124 Å)
主引用文献Structural and functional studies of Bud23-Trm112 reveal 18S rRNA N7-G1575 methylation occurs on late 40S precursor ribosomes.
Proc.Natl.Acad.Sci.USA, 111, 2014
4XAH
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BU of 4xah by Molmil
X-ray crystal structure of S. cerevisiae Cgi121
分子名称: EKC/KEOPS complex subunit CGI121
著者Zhang, W, Graille, M, Collinet, B, van Tilbeurgh, H.
登録日2014-12-14
公開日2015-03-18
最終更新日2015-04-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Gon7/Pcc1 and Bud32/Cgi121 complexes provide a model for the complete yeast KEOPS complex.
Nucleic Acids Res., 43, 2015
6H2V
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BU of 6h2v by Molmil
Crystal structure of human METTL5-TRMT112 complex, the 18S rRNA m6A1832 methyltransferase at 2.5A resolution
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者van Tran, N, Graille, M.
登録日2018-07-16
公開日2019-07-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The human 18S rRNA m6A methyltransferase METTL5 is stabilized by TRMT112.
Nucleic Acids Res., 47, 2019
4OJJ
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BU of 4ojj by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P212121)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
著者Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M.
登録日2014-01-21
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment.
Plos One, 9, 2014
4OGP
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Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P21)
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2-associated protein PAT1
著者Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M.
登録日2014-01-16
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment.
Plos One, 9, 2014
6YYM
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BU of 6yym by Molmil
Structure of S. pombe Mei2 RRM3 domain bound to RNA
分子名称: Meiosis protein mei2, RNA (5'-R(*GP*CP*UP*UP*UP*UP*UP*GP*UP*UP*CP*G)-3')
著者Hazra, D, Graille, M.
登録日2020-05-05
公開日2020-12-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献A scaffold lncRNA shapes the mitosis to meiosis switch.
Nat Commun, 12, 2021

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