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PDB: 85 件

1EYV
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THE CRYSTAL STRUCTURE OF NUSB FROM MYCOBACTERIUM TUBERCULOSIS
分子名称: N-UTILIZING SUBSTANCE PROTEIN B HOMOLOG, PHOSPHATE ION
著者Gopal, B, Haire, L.F, Cox, R.A, Colston, M.J, Major, S, Brannigan, J.A, Smerdon, S.J, Dodson, G.G, TB Structural Genomics Consortium (TBSGC)
登録日2000-05-09
公開日2000-05-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The crystal structure of NusB from Mycobacterium tuberculosis.
Nat.Struct.Biol., 7, 2000
1K0R
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Crystal Structure of Mycobacterium tuberculosis NusA
分子名称: NusA, SULFATE ION
著者Gopal, B, Haire, L.F, Gamblin, S.J, Dodson, E.J, Lane, A.N, Papavinasasundaram, K.G, Colston, M.J, Dodson, G, TB Structural Genomics Consortium (TBSGC)
登録日2001-09-20
公開日2001-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the transcription elongation/anti-termination factor NusA from Mycobacterium tuberculosis at 1.7 A resolution.
J.Mol.Biol., 314, 2001
1Y3T
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Crystal structure of YxaG, a dioxygenase from Bacillus subtilis
分子名称: FE (III) ION, Hypothetical protein yxaG
著者Gopal, B, Madan, L.L, Betz, S.F, Kossiakoff, A.A.
登録日2004-11-26
公開日2005-01-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of a Quercetin 2,3-Dioxygenase from Bacillus subtilis Suggests Modulation of Enzyme Activity by a Change in the Metal Ion at the Active Site(s)
Biochemistry, 44, 2005
4XQQ
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Crystal structure of AgrA LytTR domain in complex with promoters
分子名称: Accessory gene regulator A, DNA (5'-D(*AP*TP*TP*TP*CP*TP*TP*AP*AP*CP*TP*AP*GP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*AP*CP*TP*AP*GP*TP*TP*AP*AP*GP*AP*AP*A)-3')
著者Gopal, B, Rajasree, K.
登録日2015-01-19
公開日2016-04-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XQN
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Crystal structure of AgrA LytTR domain in complex with promoters
分子名称: 1,2-ETHANEDIOL, Accessory gene regulator A, DNA (5'-D(*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3'), ...
著者Gopal, B, Rajasree, K.
登録日2015-01-19
公開日2016-04-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XYO
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Structure of AgrA LytTR domain
分子名称: 1,2-ETHANEDIOL, Accessory gene regulator A
著者Gopal, B, Rajasree, K.
登録日2015-02-02
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XYQ
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Structure of AgrA LytTR domain in complex with promoters
分子名称: 1,2-ETHANEDIOL, Accessory gene regulator A, DNA (5'-D(*AP*AP*TP*AP*CP*TP*TP*AP*AP*CP*TP*GP*TP*TP*AP*A)-3'), ...
著者Gopal, B, Rajasree, K.
登録日2015-02-03
公開日2016-04-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XQJ
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Crystal structure of AgrA LytTR domain in complex with promoters
分子名称: 1,2-ETHANEDIOL, Accessory gene regulator A, CALCIUM ION, ...
著者Gopal, B, Rajasree, K.
登録日2015-01-19
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XXE
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Structure of AgrA LytTR domain in complex with promoters
分子名称: Accessory gene regulator A, DNA (5'-D(*AP*TP*TP*GP*CP*CP*TP*AP*AP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(P*TP*AP*CP*AP*GP*TP*TP*AP*GP*GP*CP*AP*A)-3'), ...
著者Gopal, B, Rajasree, K.
登録日2015-01-30
公開日2016-04-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4EWT
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The crystal structure of a putative aminohydrolase from methicillin resistant Staphylococcus aureus
分子名称: 1-DEOXY-1-THIO-HEPTAETHYLENE GLYCOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Girish, T.S, Vivek, B, Colaco, M, Misquith, S, Gopal, B.
登録日2012-04-27
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of an amidohydrolase, SACOL0085, from methicillin-resistant Staphylococcus aureus COL
Acta Crystallogr.,Sect.F, 69, 2013
5XE7
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Crystal structure of Mycobacterium tuberculosis extracytoplasmic function sigma factor SigJ
分子名称: ECF RNA polymerase sigma factor SigJ
著者Goutam, K, Gopal, B.
登録日2017-04-01
公開日2017-07-19
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献The fused SnoaL_2 domain in the Mycobacterium tuberculosis sigma factor sigma J modulates promoter recognition
Nucleic Acids Res., 45, 2017
4BXI
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Crystal structure of ATP binding domain of AgrC from Staphylococcus aureus
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACCESSORY GENE REGULATOR PROTEIN C, ACETATE ION, ...
著者Srivastava, S.K, Rajasree, K, Gopal, B.
登録日2013-07-12
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Influence of the Agrc-Agra Complex in the Response Time of Staphylococcus Aureus Quorum Sensing
J.Bacteriol., 196, 2014
5YJJ
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Crystal structure of PNPase from Staphylococcus epidermidis
分子名称: MAGNESIUM ION, PHOSPHATE ION, Polyribonucleotide nucleotidyltransferase
著者Raj, R, Gopal, B.
登録日2017-10-10
公開日2018-01-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2.
Biochem. Biophys. Res. Commun., 495, 2018
5ITW
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Crystal structure of Bacillus subtilis BacC Dihydroanticapsin 7-dehydrogenase
分子名称: Dihydroanticapsin 7-dehydrogenase, SULFATE ION
著者Perinbam, K, Balaram, H, Row, T.N.G, Gopal, B.
登録日2016-03-17
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Probing the influence of non-covalent contact networks identified by charge density analysis on the oxidoreductase BacC.
Protein Eng. Des. Sel., 30, 2017
5ITV
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Crystal structure of Bacillus subtilis BacC Dihydroanticapsin 7-dehydrogenase in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Dihydroanticapsin 7-dehydrogenase
著者Perinbam, K, Balaram, H, Row, T.N.G, Gopal, B.
登録日2016-03-17
公開日2017-02-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Probing the influence of non-covalent contact networks identified by charge density analysis on the oxidoreductase BacC.
Protein Eng. Des. Sel., 30, 2017
5J5D
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Crystal structure of Dihydrodipicolinate Synthase from Mycobacterium tuberculosis in complex with alpha-ketopimelic acid
分子名称: 2-oxoheptanedioic acid, 4-hydroxy-tetrahydrodipicolinate synthase, SODIUM ION
著者Navratna, V, Gopal, B.
登録日2016-04-02
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inhibition of Mycobacterium tuberculosis dihydrodipicolinate synthase by alpha-ketopimelic acid and its other structural analogues
Sci Rep, 6, 2016
6IEO
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Crystal structure of Mycobacterium tuberculosis HtrA1 (Rv1223) in regulated conformation
分子名称: Probable serine protease HtrA (DEGP protein), phenylmethanesulfonic acid
著者Gupta, A.K, Gopal, B.
登録日2018-09-14
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The crystal structure of Mycobacterium tuberculosis high-temperature requirement A protein reveals an autoregulatory mechanism.
Acta Crystallogr F Struct Biol Commun, 74, 2018
7ESS
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Structure-guided studies of the Holliday junction resolvase RuvX provide novel insights into ATP-stimulated cleavage of branched DNA and RNA substrates
分子名称: Putative pre-16S rRNA nuclease
著者Thakur, M, Mohan, D, Singh, A.K, Agarwal, A, Gopal, B, Muniyappa, K.
登録日2021-05-11
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Novel insights into ATP-Stimulated Cleavage of branched DNA and RNA Substrates through Structure-Guided Studies of the Holliday Junction Resolvase RuvX.
J.Mol.Biol., 433, 2021
7F5Y
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
分子名称: FORMIC ACID, Single-stranded DNA-binding protein
著者Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
登録日2021-06-23
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
7F5Z
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
分子名称: Single-stranded DNA-binding protein
著者Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
登録日2021-06-23
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
3VFZ
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Crystal structure of -35 promoter binding domain of SigD of Mycobacterium tuberculosis
分子名称: Probable RNA polymerase sigma-D factor
著者Jaiswal, R.K, Thakur, K.G, Gopal, B.
登録日2012-01-10
公開日2013-02-13
最終更新日2013-10-09
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis
Nucleic Acids Res., 41, 2013
3VEP
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Crystal structure of SigD4 in complex with its negative regulator RsdA
分子名称: Probable RNA polymerase sigma-D factor, SULFATE ION, Uncharacterized protein Rv3413c/MT3522
著者Jaiswal, R.K, Gopal, B.
登録日2012-01-09
公開日2013-02-13
最終更新日2013-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis
Nucleic Acids Res., 41, 2013
3U4C
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Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
分子名称: Bacilysin biosynthesis oxidoreductase ywfH, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Rajavel, M, Gopal, B.
登録日2011-10-07
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013
3U4D
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Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
分子名称: Bacilysin biosynthesis oxidoreductase ywfH
著者Rajavel, M, Gopal, B.
登録日2011-10-07
公開日2013-03-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013
3U49
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Crystal structure of YwfH, NADPH dependent reductase involved in Bacilysin biosynthesis
分子名称: Bacilysin biosynthesis oxidoreductase ywfH
著者Rajavel, M, Gopal, B.
登録日2011-10-07
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural insights into the role of Bacillus subtilis YwfH (BacG) in tetrahydrotyrosine synthesis
Acta Crystallogr.,Sect.D, 69, 2013

 

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