Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 116 件

3ZG1
DownloadVisualize
BU of 3zg1 by Molmil
NI-BOUND FORM OF M123A MUTANT OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Girard, E, Coves, J.
登録日2012-12-13
公開日2013-10-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Metal Sensing and Signal Transduction by Cnrx from Cupriavidus Metallidurans Ch34: Role of the Only Methionine Assessed by a Functional, Spectroscopic, and Theoretical Study
Metallomics, 6, 2014
1H87
DownloadVisualize
BU of 1h87 by Molmil
Gadolinium derivative of tetragonal Hen Egg-White Lysozyme at 1.7 A resolution
分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
著者Girard, E, Chantalat, L, Vicat, J, Kahn, R.
登録日2001-01-25
公開日2002-01-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Gd-Hp-Do3A, a Complex to Obtain High-Phasing-Power Heavy Atom Derivatives for Sad and MAD Experiments. Results with Tetragonal Hen Egg-White Lysozyme
Acta Crystallogr.,Sect.D, 58, 2001
2PKV
DownloadVisualize
BU of 2pkv by Molmil
D-(GGTATACC) ambient pressure
分子名称: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
著者Girard, E, Prange, T, Kahn, R, Fourme, R.
登録日2007-04-18
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
5FKP
DownloadVisualize
BU of 5fkp by Molmil
Crystal structure of the mouse CD1d in complex with the p99 peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1, BETA 2 MICROGLOBULIN, ...
著者Girardi, E, Wang, J, Zajonc, D.M.
登録日2015-10-18
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an Alpha-Helical Peptide and Lipopeptide Bound to the Non-Classical Mhc Class I Molecule Cd1D
J.Biol.Chem., 291, 2016
4ELK
DownloadVisualize
BU of 4elk by Molmil
Crystal structure of the Hy19.3 type II NKT TCR
分子名称: ACETATE ION, FORMIC ACID, Hy19.3 TCR alpha chain (mouse variable domain, ...
著者Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
登録日2012-04-10
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
4ELM
DownloadVisualize
BU of 4elm by Molmil
Crystal structure of the mouse CD1d-lysosulfatide-Hy19.3 TCR complex
分子名称: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
登録日2012-04-11
公開日2012-07-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
3TA3
DownloadVisualize
BU of 3ta3 by Molmil
Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex
分子名称: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Yu, E.D, Zajonc, D.M.
登録日2011-08-03
公開日2011-11-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unique Interplay between Sugar and Lipid in Determining the Antigenic Potency of Bacterial Antigens for NKT Cells.
Plos Biol., 9, 2011
3TVM
DownloadVisualize
BU of 3tvm by Molmil
Structure of the mouse CD1d-SMC124-iNKT TCR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Li, Y, Zajonc, D.M.
登録日2011-09-20
公開日2012-02-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Glycolipids that Elicit IFN-gama-Biased Responses from Natural Killer T Cells
Chem.Biol., 18, 2011
3T1F
DownloadVisualize
BU of 3t1f by Molmil
Crystal structure of the mouse CD1d-Glc-DAG-s2 complex
分子名称: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Zajonc, D.M.
登録日2011-07-21
公開日2011-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Invariant natural killer T cells recognize glycolipids from pathogenic Gram-positive bacteria.
Nat.Immunol., 12, 2011
2VUO
DownloadVisualize
BU of 2vuo by Molmil
Crystal structure of the rabbit IgG Fc fragment
分子名称: AZIDE ION, FORMIC ACID, GLYCEROL, ...
著者Girardi, E, Holdom, M.D, Davies, A.M, Sutton, B.J, Beavil, A.J.
登録日2008-05-27
公開日2008-09-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Crystal Structure of Rabbit Igg-Fc.
Biochem.J., 417, 2009
5EFI
DownloadVisualize
BU of 5efi by Molmil
Crystal structure of mouse CD1d in complex with the p99p lipopeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Girardi, E, Wang, J, Zajonc, D.M.
登録日2015-10-23
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
J.Biol.Chem., 291, 2016
2PL8
DownloadVisualize
BU of 2pl8 by Molmil
D(GTATACC) under hydrostatic pressure of 1.04 GPa
分子名称: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SPERMINE
著者Prange, T, Girard, E, Fourme, R, Kahn, R.
登録日2007-04-19
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
6EQO
DownloadVisualize
BU of 6eqo by Molmil
Tri-functional propionyl-CoA synthase of Erythrobacter sp. NAP1 with bound NADP+ and phosphomethylphosphonic acid adenylate ester
分子名称: Acetyl-coenzyme A synthetase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Zarzycki, J, Bernhardsgruetter, I, Voegeli, B, Wagner, T, Engilberge, S, Girard, E, Shima, S, Erb, T.J.
登録日2017-10-13
公開日2018-10-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite.
Nat. Chem. Biol., 14, 2018
9END
DownloadVisualize
BU of 9end by Molmil
Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 3
分子名称: CHLORIDE ION, Malate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Coquille, S, Roche, J, Girard, E, Madern, D.
登録日2024-03-12
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Navigating the conformational landscape of an enzyme. Stabilization of a low populated conformer by evolutionary mutations triggers Allostery into a non-allosteric enzyme.
To be published
6BII
DownloadVisualize
BU of 6bii by Molmil
Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW)
分子名称: GLYCEROL, Glyoxylate reductase, MALONATE ION, ...
著者Lassalle, L, Shabalin, I.G, Girard, E, Minor, W.
登録日2017-11-02
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.
Sci Rep, 6, 2016
5AOV
DownloadVisualize
BU of 5aov by Molmil
Ternary Crystal Structure of Pyrococcus furiosus Glyoxylate Hydroxypyruvate Reductase in presence of glyoxylate
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, GLYOXYLATE REDUCTASE, ...
著者Lassalle, L, Girard, E.
登録日2015-09-12
公開日2016-03-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献New Insights Into the Mechanism of Substrates Trafficking in Glyoxylate/Hydroxypyruvate Reductases.
Sci.Rep., 6, 2016
2BH8
DownloadVisualize
BU of 2bh8 by Molmil
Combinatorial Protein 1b11
分子名称: 1B11
著者De Bono, S, Riechmann, L, Girard, E, Williams, R.L, Winter, G.
登録日2005-01-07
公開日2005-02-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Segment of Cold Shock Protein Directs the Folding of a Combinatorial Protein
Proc.Natl.Acad.Sci.USA, 102, 2005
4JMQ
DownloadVisualize
BU of 4jmq by Molmil
Crystal structure of pb9: The Dit of bacteriophage T5.
分子名称: Bacteriophage T5 distal tail protein
著者Flayhan, A, Vellieux, F.M.D, Girard, E, Maury, O, Boulanger, P, Breyton, C.
登録日2013-03-14
公開日2013-11-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Crystal Structure of pb9, the Distal Tail Protein of Bacteriophage T5: a Conserved Structural Motif among All Siphophages.
J.Virol., 88, 2014
7ZQN
DownloadVisualize
BU of 7zqn by Molmil
d(CGCGCG)2 Z-DNA AT 5400 BARS (540 MPa)
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Prange, T, Colloc'h, N, Girard, E.
登録日2022-05-01
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
7ZQO
DownloadVisualize
BU of 7zqo by Molmil
d(CGCGCG)2 Z-DNA AT 7150 BARS (715 MPa)
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Prange, T, Colloc'h, N, Girard, E.
登録日2022-05-01
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
7ZQM
DownloadVisualize
BU of 7zqm by Molmil
d(CGCGCG)2 Z-DNA AT 3000 BARS (300 MPa)
分子名称: MAGNESIUM ION, Z-DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Prange, T, Colloc'h, N, Girard, E.
登録日2022-05-01
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022
5MF2
DownloadVisualize
BU of 5mf2 by Molmil
Bacteriophage T5 distal tail protein pb9 co-crystallized with Tb-Xo4
分子名称: CHLORIDE ION, Distal tail protein, TERBIUM(III) ION, ...
著者Engilberge, S, Riobe, F, Di Pietro, S, Lassalle, L, Arnaud, C.-A, Breyton, C, Madern, D, Coquelle, N, Maury, O, Girard, E.
登録日2016-11-17
公開日2017-09-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallophore: a versatile lanthanide complex for protein crystallography combining nucleating effects, phasing properties, and luminescence.
Chem Sci, 8, 2017
8P2Q
DownloadVisualize
BU of 8p2q by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-OH
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Alsalman, Z, Girard, E.
登録日2023-05-16
公開日2024-06-05
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8POB
DownloadVisualize
BU of 8pob by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-SO3
分子名称: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-(3-sulfopropyl)-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
著者Alsalman, Z, Girard, E.
登録日2023-07-04
公開日2024-07-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8PIW
DownloadVisualize
BU of 8piw by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-NMet2
分子名称: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-[3-(dimethylamino)propyl]-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
著者Alsalman, Z, Girard, E.
登録日2023-06-22
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon