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PDB: 282 results

4BQB
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BU of 4bqb by Molmil
Crystal structure of the FN5 and FN6 domains of NEO1, form 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEOGENIN
Authors:Bell, C.H, Healey, E, van Erp, S, Bishop, B, Tang, C, Gilbert, R.J.C, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2013-05-30
Release date:2013-06-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub
Science, 341, 2013
4BQ6
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BU of 4bq6 by Molmil
Crystal structure of the RGMB-NEO1 complex form 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEOGENIN, RGM DOMAIN FAMILY MEMBER B
Authors:Bell, C.H, Healey, E, van Erp, S, Bishop, B, Tang, C, Gilbert, R.J.C, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2013-05-30
Release date:2013-06-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub
Science, 341, 2013
2CME
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BU of 2cme by Molmil
The crystal structure of SARS coronavirus ORF-9b protein
Descriptor: DECANE, HYPOTHETICAL PROTEIN 5
Authors:Meier, C, Aricescu, A.R, Assenberg, R, Aplin, R.T, Gilbert, R.J.C, Grimes, J.M, Stuart, D.I.
Deposit date:2006-05-06
Release date:2006-07-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Crystal Structure of Orf-9B, a Lipid Binding Protein from the Sars Coronavirus.
Structure, 14, 2006
4BQ9
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BU of 4bq9 by Molmil
Crystal structure of the FN5 and FN6 domains of NEO1, form 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEOGENIN
Authors:Bell, C.H, Healey, E, van Erp, S, Bishop, B, Tang, C, Gilbert, R.J.C, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2013-05-30
Release date:2013-06-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub
Science, 341, 2013
3QHT
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BU of 3qht by Molmil
Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO
Descriptor: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3
Authors:Koide, S, Gilbreth, R.N.
Deposit date:2011-01-26
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design.
Proc.Natl.Acad.Sci.USA, 108, 2011
1IDK
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BU of 1idk by Molmil
PECTIN LYASE A
Descriptor: PECTIN LYASE A
Authors:Mayans, O, Scott, M, Connerton, I, Gravesen, T, Benen, J, Visser, J, Pickersgill, R, Jenkins, J.
Deposit date:1996-10-04
Release date:1997-10-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Two crystal structures of pectin lyase A from Aspergillus reveal a pH driven conformational change and striking divergence in the substrate-binding clefts of pectin and pectate lyases.
Structure, 5, 1997
7ACR
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BU of 7acr by Molmil
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
Deposit date:2020-09-11
Release date:2021-08-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
6SB3
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BU of 6sb3 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pre-pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
7AC7
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BU of 7ac7 by Molmil
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
Deposit date:2020-09-10
Release date:2021-08-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
5J69
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BU of 5j69 by Molmil
Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Astrotactin-2
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-04-04
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.63 Å)
Cite:Structure of astrotactin-2: a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development.
Open Biology, 6, 2016
1FI2
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BU of 1fi2 by Molmil
CRYSTAL STRUCTURE OF GERMIN (OXALATE OXIDASE)
Descriptor: MANGANESE (II) ION, OXALATE OXIDASE
Authors:Woo, E.J, Dunwell, J.M, Goodenough, P.W, Marvier, A.C, Pickersgill, R.W.
Deposit date:2000-08-03
Release date:2001-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities.
Nat.Struct.Biol., 7, 2000
1JQF
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BU of 1jqf by Molmil
Human Transferrin N-Lobe Mutant H249Q
Descriptor: CARBONATE ION, FE (III) ION, POTASSIUM ION, ...
Authors:Baker, H.M, Mason, A.B, He, Q.-Y, MacGillivray, R.T.A, Baker, E.N.
Deposit date:2001-08-06
Release date:2001-10-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand variation in the transferrin family: the crystal structure of the H249Q mutant of the human transferrin N-lobe as a model for iron binding in insect transferrins.
Biochemistry, 40, 2001
5J68
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BU of 5j68 by Molmil
Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Astrotactin-2, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-04-04
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5.221 Å)
Cite:Structure of astrotactin-2: a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development.
Open Biology, 6, 2016
1K3X
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BU of 1k3x by Molmil
Crystal structure of a trapped reaction intermediate of the DNA repair enzyme Endonuclease VIII with Brominated-DNA
Descriptor: 5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(*GP*GP*CP*(BRU)P*(BRU)P*CP*AP*(BRU)P*CP*CP*(BRU)P*GP*G)-3', Endonuclease VIII, ...
Authors:Golan, G, Zharkov, D.O, Gilboa, R, Fernandes, A.S, Kycia, J.H, Gerchman, S.E, Rieger, R.A, Grollman, A.P, Shoham, G.
Deposit date:2001-10-04
Release date:2002-10-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural analysis of an Escherichia coli endonuclease VIII covalent reaction intermediate.
EMBO J., 21, 2002
4YP2
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BU of 4yp2 by Molmil
Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from Momordica charantia
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NICOTINAMIDE, Ribosome-inactivating protein momordin I
Authors:Vinkovic, M, Hussain, J, Wood, G.E, Gill, R, Wood, S.P.
Deposit date:2015-03-12
Release date:2015-05-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Cleavage of nicotinamide adenine dinucleotide by the ribosome-inactivating protein from Momordica charantia.
Acta Crystallogr.,Sect.F, 71, 2015
1N82
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BU of 1n82 by Molmil
The high-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus
Descriptor: GLYCEROL, SODIUM ION, intra-cellular xylanase
Authors:Solomon, V, Teplitsky, A, Golan, G, Gilboa, R, Reiland, V, Shulami, S, Moryles, S, Zolotnitsky, G, Shoham, Y, Shoham, G.
Deposit date:2002-11-19
Release date:2003-11-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The high-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus
To be Published
1N84
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BU of 1n84 by Molmil
HUMAN SERUM TRANSFERRIN, N-LOBE
Descriptor: CARBONATE ION, FE (III) ION, Serotransferrin
Authors:Adams, T.E, Mason, A.B, He, Q.Y, Halbrooks, P.J, Briggs, S.K, Smith, V.C, Macgillivray, R.T, Everse, S.J.
Deposit date:2002-11-19
Release date:2003-03-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:THE POSITION OF ARGININE 124 CONTROLS THE RATE OF IRON RELEASE FROM THE N-LOBE OF HUMAN SERUM TRANSFERRIN. A STRUCTURAL STUDY
J.Biol.Chem., 278, 2003
6SB5
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BU of 6sb5 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
7B54
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BU of 7b54 by Molmil
VAR2CSA full ectodomain in present of plCS, DBL1-DBL4
Descriptor: VAR2CSA in presence of plCS, DBl1-DBL4,Erythrocyte membrane protein 1
Authors:Wang, K.T, Dagil, R, Gourdon, P.E, Salanti, A.
Deposit date:2020-12-03
Release date:2021-06-02
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
4BQ7
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BU of 4bq7 by Molmil
Crystal structure of the RGMB-Neo1 complex form 2
Descriptor: NEOGENIN, RGM DOMAIN FAMILY MEMBER B
Authors:Bell, C.H, Healey, E, van Erp, S, Bishop, B, Tang, C, Gilbert, R.J.C, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2013-05-30
Release date:2013-06-12
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (6.601 Å)
Cite:Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub
Science, 341, 2013
4BQC
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BU of 4bqc by Molmil
Crystal structure of the FN5 and FN6 domains of NEO1 bound to SOS
Descriptor: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, NEOGENIN, ...
Authors:Bell, C.H, Healey, E, vanErp, S, Bishop, B, Tang, C, Gilbert, R.J.C, Aricescu, A.R, Pasterkamp, R.J, Siebold, C.
Deposit date:2013-05-30
Release date:2013-06-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the Repulsive Guidance Molecule (Rgm)-Neogenin Signaling Hub
Science, 341, 2013
7ACJ
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BU of 7acj by Molmil
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
Deposit date:2020-09-11
Release date:2021-08-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
7ABZ
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BU of 7abz by Molmil
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
Deposit date:2020-09-09
Release date:2021-08-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
1K3W
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BU of 1k3w by Molmil
Crystal structure of a trapped reaction intermediate of the DNA Repair Enzyme Endonuclease VIII with DNA
Descriptor: 5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*GP*G)-3', Endonuclease VIII, ...
Authors:Golan, G, Zharkov, D.O, Gilboa, R, Fernandes, A.S, Kycia, J.H, Gerchman, S.E, Rieger, R.A, Grollman, A.P, Shoham, G.
Deposit date:2001-10-04
Release date:2002-10-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural analysis of an Escherichia coli endonuclease VIII covalent reaction intermediate.
EMBO J., 21, 2002
7B52
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BU of 7b52 by Molmil
VAR2CSA full ectodomain
Descriptor: Erythrocyte membrane protein 1
Authors:Wang, K.T, Gourdon, P.E, Dagil, R, Salanti, A.
Deposit date:2020-12-03
Release date:2021-04-21
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021

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