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PDB: 22 results

1DGO
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SOLUTION STRUCTURE OF A URACIL CONTAINING HAIRPIN DNA
Descriptor: URACIL CONTAINING HAIRPIN DNA
Authors:Ghosh, M, Kumar, N.V, Varshney, U, Chary, K.V.R.
Deposit date:1999-11-24
Release date:2000-05-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for uracil DNA glycosylase interaction with uracil: NMR study.
Nucleic Acids Res., 28, 2000
1H4I
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Methylobacterium extorquens methanol dehydrogenase
Descriptor: CALCIUM ION, METHANOL DEHYDROGENASE SUBUNIT 1, METHANOL DEHYDROGENASE SUBUNIT 2, ...
Authors:Ghosh, M, Anthony, C, Harlos, K, Goodwin, M.G, Blake, C.
Deposit date:2001-05-11
Release date:2001-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The Refined Structure of the Quinoprotein Methanol Dehydrogenase from Methylobacterium Extorquens at 1.94 A.
Structure, 3, 1995
1RO4
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RDC-derived models of the zinc ribbon domain of human general transcription factor TFIIB (zinc free structures)
Descriptor: Transcription initiation factor IIB
Authors:Ghosh, M, Ikura, M.
Deposit date:2003-12-01
Release date:2004-05-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB.
Biochem.J., 378, 2004
1RLY
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RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc bound structures)
Descriptor: Transcription initiation factor IIB, ZINC ION
Authors:Ghosh, M, Ikura, M.
Deposit date:2003-11-26
Release date:2004-05-25
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB.
Biochem.J., 378, 2004
1E3F
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Structure of human transthyretin complexed with bromophenols: a new mode of binding
Descriptor: TRANSTHYRETIN
Authors:Ghosh, M, Meerts, I.A.T.M, Cook, A, Bergman, A, Brouwer, A, Johnson, L.N.
Deposit date:2000-06-14
Release date:2000-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Human Transthyretin Complexed with Bromophenols : A New Mode of Binding
Acta Crystallogr.,Sect.D, 56, 2000
1E4H
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Structure of human transthyretin complexed with bromophenols: a new mode of binding
Descriptor: GLYCEROL, PENTABROMOPHENOL, TRANSTHYRETIN
Authors:Ghosh, M, Meerts, I.A.T.M, Cook, A, Bergman, A, Brouwer, A, Johnson, L.N.
Deposit date:2000-07-04
Release date:2000-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Human Transthyretin Complexed with Bromophenols : A New Mode of Binding
Acta Crystallogr.,Sect.D, 56, 2000
2O3B
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Crystal structure complex of Nuclease A (NucA) with intra-cellular inhibitor NuiA
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Ghosh, M, Meiss, G, Pingoud, A.M, London, R.E, Pedersen, L.C.
Deposit date:2006-12-01
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The nuclease a-inhibitor complex is characterized by a novel metal ion bridge.
J.Biol.Chem., 282, 2007
1E5A
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Structure of human transthyretin complexed with bromophenols: a new mode of binding
Descriptor: 2,4,6-TRIBROMOPHENOL, TRANSTHYRETIN
Authors:Ghosh, M, Meerts, I.A.T.M, Cook, A, Bergman, A, Brouwer, A, Johnson, L.N.
Deposit date:2000-07-20
Release date:2000-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Human Transthyretin Complexed with Bromophenols : A New Mode of Binding
Acta Crystallogr.,Sect.D, 56, 2000
1ZM8
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Apo Crystal structure of Nuclease A from Anabaena sp.
Descriptor: MANGANESE (II) ION, Nuclease, SODIUM ION, ...
Authors:Ghosh, M, Meiss, G, Pingoud, A, London, R.E, Pedersen, L.C.
Deposit date:2005-05-10
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into the Mechanism of Nuclease A, a beta beta alpha Metal Nuclease from Anabaena.
J.Biol.Chem., 280, 2005
1IDX
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Structural Basis for Poor Excision from Hairpin DNA: NMR Study
Descriptor: 5'-D(*AP*GP*GP*AP*TP*CP*CP*TP*TP*UP*TP*GP*GP*AP*TP*CP*CP*T)-3'
Authors:Ghosh, M, Rumpal, N, Varshney, U, Chary, K.V.
Deposit date:2001-04-05
Release date:2002-05-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for poor uracil excision from hairpin DNA. An NMR study.
Eur.J.Biochem., 269, 2002
1II1
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Structural Basis for Poor Uracil Excision from Hairpin DNA: NMR Study
Descriptor: 5'-D(*AP*GP*GP*AP*TP*CP*CP*UP*TP*TP*TP*GP*GP*AP*TP*CP*CP*T)-3'
Authors:Ghosh, M, Rumpal, N, Varshney, U, Chary, K.V.
Deposit date:2001-04-20
Release date:2002-05-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for poor uracil excision from hairpin DNA. An NMR study.
Eur.J.Biochem., 269, 2002
8DAK
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Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase from Campylobacter jejuni, serotype HS:3
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-13
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DB5
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Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:15
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase, GUANOSINE-5'-DIPHOSPHATE
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-14
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCL
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Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase from campylobacter jejuni, serotype HS:23/36
Descriptor: 1,2-ETHANEDIOL, GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-16
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCO
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Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:42
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-17
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8EWU
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X-ray structure of the GDP-6-deoxy-4-keto-D-lyxo-heptose-4-reductase from Campylobacter jejuni HS:15
Descriptor: 1,2-ETHANEDIOL, GDP-L-fucose synthase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Riegert, A.S, Raushel, F.M, Holden, H.M.
Deposit date:2022-10-24
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bifunctional Epimerase/Reductase Enzymes Facilitate the Modulation of 6-Deoxy-Heptoses Found in the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 62, 2023
1PV9
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Prolidase from Pyrococcus furiosus
Descriptor: Xaa-Pro dipeptidase, ZINC ION
Authors:Maher, M.J, Ghosh, M, Grunden, A.M, Menon, A.L, Adams, M.W, Freeman, H.C, Guss, J.M.
Deposit date:2003-06-27
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Prolidase from Pyrococcus furiosus.
Biochemistry, 43, 2004
2KHX
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BU of 2khx by Molmil
Drosha double-stranded RNA binding motif
Descriptor: Ribonuclease 3
Authors:Mueller, G.A, Miller, M, Ghosh, M, DeRose, E.F, London, R.E, Hall, T.
Deposit date:2009-04-13
Release date:2010-02-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Drosha double-stranded RNA-binding domain.
Silence, 1, 2010
2VAH
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Solution structure of a B-DNA hairpin at low pressure.
Descriptor: 5'-D(*AP*GP*GP*AP*TP*CP*CP*TP*UP*TP *TP*GP*GP*AP*TP*CP*CP*T)-3'
Authors:Williamson, M.P, Wilton, D.J, Ghosh, M, Chary, K.V.A, Akasaka, K.
Deposit date:2007-08-31
Release date:2007-09-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Change in a B-DNA Helix with Hydrostatic Pressure
Nucleic Acids Res., 36, 2008
2VAI
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Solution structure of a B-DNA hairpin at high pressure
Descriptor: 5'-D(*AP*GP*GP*AP*TP*CP*CP*TP*UP*TP *TP*GP*GP*AP*TP*CP*CP*T)-3'
Authors:Williamson, M.P, Wilton, D.J, Ghosh, M, Chary, K.V.A, Akasaka, K.
Deposit date:2007-08-31
Release date:2007-09-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural change in a B-DNA helix with hydrostatic pressure.
Nucleic Acids Res., 36, 2008
1HDI
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Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.
Descriptor: 3-PHOSPHOGLYCERIC ACID, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Szilagyi, A.N, Ghosh, M, Garman, E, Vas, M.
Deposit date:2000-11-16
Release date:2001-02-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A 1.8 A resolution structure of pig muscle 3-phosphoglycerate kinase with bound MgADP and 3-phosphoglycerate in open conformation: new insight into the role of the nucleotide in domain closure.
J. Mol. Biol., 306, 2001
1QE7
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SOLUTION STRUCTURE OF A URACIL CONTAINING HAIRPIN DNA
Descriptor: URACIL CONTAINING HAIRPIN 22-MER DNA
Authors:Chary, K.V.R, Ghosh, M.
Deposit date:1999-07-13
Release date:2000-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural characterisation of a uracil containing hairpin DNA by NMR and molecular dynamics.
Nucleic Acids Res., 27, 1999

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