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PDB: 120 results

6F9G
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BU of 6f9g by Molmil
Ligand binding domain of P. putida KT2440 polyamine chemorecpetors McpU in complex putrescine.
Descriptor: 1,4-DIAMINOBUTANE, ACETATE ION, GLYCEROL, ...
Authors:Gavira, J.A, Conejero-Muriel, M.T, Ortega, A, Martin-Mora, D, Corral-Lugo, A, Morel, B, Krell, T.
Deposit date:2017-12-14
Release date:2018-03-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida.
J. Mol. Biol., 430, 2018
6GJF
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BU of 6gjf by Molmil
Ancestral endocellulase Cel5A
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ENDOGLUCANASE, ...
Authors:Gavira, J.A, Perez-Jimenez, R, Barruetabena-Garate, N.
Deposit date:2018-05-16
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Resurrection of efficient Precambrian endoglucanases for lignocellulosic biomass hydrolysis
Commun Chem, 2019
4B88
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BU of 4b88 by Molmil
Ancestral (GNCA) Beta-lactamase class A
Descriptor: BETA-LACTAMASE, FORMIC ACID
Authors:Gavira, J.A, Risso, V.A, Sanchez-Ruiz, J.M.
Deposit date:2012-08-24
Release date:2013-02-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Hyperstability and Substrate Promiscuity in Laboratory Resurrections of Precambrian Beta-Lactamases.
J.Am.Chem.Soc., 135, 2013
2YPM
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BU of 2ypm by Molmil
Crystal Structure of Ancestral Thioredoxin Relative to Last Animal and Fungi Common Ancestor (LAFCA) from the Precambrian Period
Descriptor: LAFCA THIOREDOXIN
Authors:Gavira, J.A, Ingles-Prieto, A, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2012-10-30
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Conservation of Protein Structure Over Four Billion Years
Structure, 21, 2013
2YN1
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BU of 2yn1 by Molmil
Crystal Structure of Ancestral Thioredoxin Relative to Last Gamma- Proteobacteria Common Ancestor (LGPCA) from the Precambrian Period
Descriptor: LGPCA THIOREDOXIN, TRIETHYLENE GLYCOL
Authors:Gavira, J.A, Ingles-Prieto, A, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2012-10-11
Release date:2013-08-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conservation of Protein Structure Over Four Billion Years
Structure, 21, 2013
2YJ7
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BU of 2yj7 by Molmil
Crystal structure of a hyperstable protein from the Precambrian period
Descriptor: LPBCA THIOREDOXIN, SODIUM ION
Authors:Gavira, J.A, Ingles, A, Ibarra, B, Garcia-Ruiz, J.M.
Deposit date:2011-05-19
Release date:2012-05-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conservation of Protein Structure Over Four Billion Years
Structure, 21, 2013
2YNX
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BU of 2ynx by Molmil
Crystal Structure of Ancestral Thioredoxin Relative to Last Archaea Common Ancestor (LACA) from the Precambrian Period
Descriptor: ACETATE ION, LACA THIOREDOXIN, SODIUM ION
Authors:Gavira, J.A, Ingles-Prieto, A, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2012-10-19
Release date:2013-08-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Conservation of Protein Structure Over Four Billion Years
Structure, 21, 2013
2H74
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BU of 2h74 by Molmil
Crystal Structure of Thioredoxin Mutant D2E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Thioredoxin Mutant D2E in Hexagonal (p61) Space Group
To be Published
2H72
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BU of 2h72 by Molmil
Crystal Structure of Thioredoxin mutant E85D in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Thioredoxin mutant E85D in Hexagonal (p61) Space Group
To be Published
2H75
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BU of 2h75 by Molmil
Crystal Structure of Thioredoxin Mutant D13E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Thioredoxin Mutant D13E in Hexagonal (p61) Space Group
To be Published
2H76
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BU of 2h76 by Molmil
Crystal Structure of Thioredoxin Mutant D10E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Thioredoxin Mutant D10E in Hexagonal (p61) Space Group
To be Published
2H6Y
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BU of 2h6y by Molmil
Crystal Structure of Thioredoxin Mutant E48D in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Thioredoxin Mutant E48D in Hexagonal (p61) Space Group
To be Published
3PI3
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BU of 3pi3 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 5.0
Descriptor: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI2
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BU of 3pi2 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 8.0
Descriptor: FORMIC ACID, Hemoglobin II, OXYGEN MOLECULE, ...
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI1
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BU of 3pi1 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 9.0
Descriptor: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI4
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BU of 3pi4 by Molmil
Crystallographic Structure of HbII-oxy from Lucina pectinata at pH 4.0
Descriptor: Hemoglobin II, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A, Nieves-Marrero, C.A, Ruiz-Martinez, C.R, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3M0U
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BU of 3m0u by Molmil
Crystal Structure of the R21D mutant of alpha-spectrin SH3 domain. Hexagonal crystal obtained in sodium formate at pH 6.5.
Descriptor: FORMIC ACID, Spectrin alpha chain, brain
Authors:Gavira, J.A, Camara-Artigas, A.
Deposit date:2010-03-03
Release date:2011-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Understanding the polymorphic behaviour of a mutant of the alpha-spectrin SH3 domain by means of two 1.1 A structures
Acta Crystallogr.,Sect.D, 2011
3M0R
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BU of 3m0r by Molmil
Crystal Structure of the R21D mutant of alpha-spectrin SH3 domain. Crystal obtained in ammonium sulphate at pH 6.
Descriptor: SULFATE ION, Spectrin alpha chain, brain
Authors:Gavira, J.A, Camara-Artigas, A.
Deposit date:2010-03-03
Release date:2011-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Understanding the polymorphic behaviour of a mutant of the alpha-spectrin SH3 domain by means of two 1.1 A structures
Acta Crystallogr.,Sect.D, 2011
3PT8
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BU of 3pt8 by Molmil
Structure of HbII-III-CN from Lucina pectinata at pH 5.0
Descriptor: CYANIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Gavira, J.A, Ruiz-Martinez, C.R, Nieves-Marrero, C.A, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-12-02
Release date:2011-12-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:New Crystallographic Structure of HbII-III-Oxy and CN forms from Lucina pectinata.
To be Published
3PT7
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BU of 3pt7 by Molmil
Structure of HbII-III-Oxy from Lucina pectinata at pH 5.0
Descriptor: GLYCEROL, Hemoglobin II, Hemoglobin III, ...
Authors:Gavira, J.A, Ruiz-Martinez, C.R, Nieves-Marrero, C.A, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-12-02
Release date:2011-12-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:New Crystallographic Structure of HbII-III-Oxy and CN forms from Lucina pectinata.
To be Published
2H6Z
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BU of 2h6z by Molmil
Crystal Structure of Thioredoxin Mutant E44D in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A stability pattern of protein hydrophobic mutations that reflects evolutionary structural optimization.
Biophys.J., 89, 2005
2H70
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BU of 2h70 by Molmil
Crystal Structure of Thioredoxin Mutant D9E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A stability pattern of protein hydrophobic mutations that reflects evolutionary structural optimization.
Biophys.J., 89, 2005
1IEE
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BU of 1iee by Molmil
STRUCTURE OF TETRAGONAL HEN EGG WHITE LYSOZYME AT 0.94 A FROM CRYSTALS GROWN BY THE COUNTER-DIFFUSION METHOD
Descriptor: CHLORIDE ION, LYSOZYME C, SODIUM ION
Authors:Sauter, C, Otalora, F, Gavira, J.-A, Vidal, O, Giege, R, Garcia-Ruiz, J.-M.
Deposit date:2001-04-09
Release date:2001-08-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Structure of tetragonal hen egg-white lysozyme at 0.94 A from crystals grown by the counter-diffusion method.
Acta Crystallogr.,Sect.D, 57, 2001
7A6G
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BU of 7a6g by Molmil
Structural characterization of L-proline amide hydrolase from Pseudomonas syringae
Descriptor: PHOSPHATE ION, Putative Proline iminopeptidase
Authors:Martinez-Rodriguez, S, Gavira, J.A.
Deposit date:2020-08-25
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A New L-Proline Amide Hydrolase with Potential Application within the Amidase Process
Crystals, 12, 2022
3K82
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BU of 3k82 by Molmil
Crystal Structure of the third PDZ domain of PSD-95
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Disks large homolog 4, GLYCEROL, ...
Authors:Camara-Artigas, A, Gavira, J.A.
Deposit date:2009-10-13
Release date:2010-04-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Novel conformational aspects of the third PDZ domain of the neuronal post-synaptic density-95 protein revealed from two 1.4A X-ray structures
J.Struct.Biol., 170, 2010

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PDB entries from 2024-11-13

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