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PDB: 11 results

7PUJ
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BU of 7puj by Molmil
Crystal structure of Endoglycosidase E GH18 domain from Enterococcus faecalis
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, ZINC ION
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.E.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7PUK
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Crystal structure of Endoglycosidase E GH18 domain from Enterococcus faecalis in complex with Man5 product
Descriptor: Beta-N-acetylhexosaminidase, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7PUL
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Crystal structure of Endoglycosidase E GH20 domain from Enterococcus faecalis
Descriptor: Beta-N-acetylhexosaminidase, CALCIUM ION, GLY-ALA-GLY-ALA-ALA, ...
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7NWF
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Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with hybrid-type glycan (GalGlcNAcMan5GlcNAc) product
Descriptor: Endo-beta-N-acetylglucosaminidase F1, GLYCEROL, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Trastoy, B, Du, J.J, Garcia-Alija, M, Sundberg, E.J, Guerin, M.E.
Deposit date:2021-03-16
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:GH18 endo-beta-N-acetylglucosaminidases use distinct mechanisms to process hybrid-type N-linked glycans.
J.Biol.Chem., 297, 2021
5L6V
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BU of 5l6v by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a negative allosteric regulator adenosine monophosphate (AMP) - AGPase*AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase, PHOSPHATE ION, ...
Authors:Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.667 Å)
Cite:Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
9F9V
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BU of 9f9v by Molmil
Crystal structure of 892_05174 from Planctomycetota strain 892
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CALCIUM ION, Putative secreted protein, ...
Authors:Perez-Cruz, C, Moraleda-Montoya, A, Liebana, R, Lorizate, M, Arrizabalaga, U, Garcia-Alija, M, Terrones, O, Contreras, F.X, Guerin, M.E, Trastoy, B, Alonso-Saez, L.
Deposit date:2024-05-08
Release date:2025-01-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.
Nat Commun, 15, 2024
5L6S
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BU of 5l6s by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a positive allosteric regulator beta-fructose-1,6-diphosphate (FBP) - AGPase*FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase, SULFATE ION
Authors:Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
9HMB
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BU of 9hmb by Molmil
Crystal structure of GH139 glycoside hydrolase from Verrucomicrobium sp. in the hexagonal space group P6522
Descriptor: DUF5703 domain-containing protein, GLYCEROL
Authors:Moraleda-Montoya, A, Garcia-Alija, M, Trastoy, B, Guerin, M.
Deposit date:2024-12-08
Release date:2025-07-02
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Understanding the substrate recognition and catalytic mechanism of 2-O-methyl fucosidases from glycoside hydrolase family 139.
J.Biol.Chem., 301, 2025
8RG3
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BU of 8rg3 by Molmil
Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 1 21 1
Descriptor: 1,2-ETHANEDIOL, Glycoside-hydrolase family GH114 TIM-barrel domain-containing protein
Authors:Perez-Curz, C, Moraleda-Montoya, A, Liebana, R, Lorizate, M, Arrizabalaga, U, Garcia-Alija, M, Terrones, O, Contreras, F.X, Guerin, M.E, Trastoy, B, Alonso-Saez, L.
Deposit date:2023-12-13
Release date:2025-01-01
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.
Nat Commun, 15, 2024
8RG5
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Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 4 21 2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glycoside-hydrolase family GH114 TIM-barrel domain-containing protein
Authors:Perez-Cruz, C, Moraleda-Montoya, A, Liebana, R, Lorizate, M, Arrizabalaga, U, Garcia-Alija, M, Terrones, O, Contreras, F.X, Guerin, M.E, Trastoy, B, Alonso-Saez, L.
Deposit date:2023-12-13
Release date:2025-01-01
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.
Nat Commun, 15, 2024
8RG4
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BU of 8rg4 by Molmil
Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 21 21 21
Descriptor: 1,2-ETHANEDIOL, Glycoside-hydrolase family GH114 TIM-barrel domain-containing protein
Authors:Perez-Cruz, C, Moraleda-Montoya, A, Liebana, R, Lorizate, M, Arrizabalaga, U, Garcia-Alija, M, Terrones, O, Contreras, F.X, Guerin, M.E, Trastoy, B, Alonso-Saez, L.
Deposit date:2023-12-13
Release date:2025-01-01
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (1.404 Å)
Cite:Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.
Nat Commun, 15, 2024

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