7NWF

Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with hybrid-type glycan (GalGlcNAcMan5GlcNAc) product

Summary for 7NWF

• Entry DOI: 10.2210/pdb7nwf/pdb
• Descriptor: Endo-beta-N-acetylglucosaminidase F1, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... (4 entities in total)
• Functional Keywords: endo-b-n-acetylglucosaminidase, endobt-3987, bt3987, glycoside hydrolase, hydrolase
• Biological source: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
• Total number of polymer chains: 1
• Total formula weight: 50775.18

Authors

Trastoy, B.,Du, J.J.,Garcia-Alija, M.,Sundberg, E.J.,Guerin, M.E. (deposition date: 2021-03-16, release date: 2021-08-04, Last modification date: 2024-01-31)

• Primary citation: Trastoy, B.,Du, J.J.,Li, C.,Garcia-Alija, M.,Klontz, E.H.,Roberts, B.R.,Donahue, T.C.,Wang, L.X.,Sundberg, E.J.,Guerin, M.E.; GH18 endo-beta-N-acetylglucosaminidases use distinct mechanisms to process hybrid-type N-linked glycans.; J.Biol.Chem., 297:101011-101011, 2021; PubMed: 34324829; DOI: 10.1016/j.jbc.2021.101011

Experimental method

X-RAY DIFFRACTION (2 Å)