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PDB: 700 results

1VAQ
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Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion
Descriptor: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
Authors:Hou, M.H, Robinson, H, Gao, Y.G, Wang, A.H.-J.
Deposit date:2004-02-19
Release date:2004-06-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the [Mg2+-(chromomycin A3)2]-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by a metal ion
Nucleic Acids Res., 32, 2004
5FC9
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Novel Purple Cupredoxin from Nitrosopumilus maritimus
Descriptor: Blue (Type 1) copper domain protein, COPPER (II) ION
Authors:Hosseinzadeh, P, Lu, Y, Robinson, H, Gao, Y.-G.
Deposit date:2015-12-15
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Purple Cupredoxin from Nitrosopumilus maritimus Containing a Mononuclear Type 1 Copper Center with an Open Binding Site.
J.Am.Chem.Soc., 138, 2016
1GVP
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GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
Descriptor: GENE V PROTEIN
Authors:Su, S, Gao, Y.-G, Zhang, H, Terwilliger, T.C, Wang, A.H.-J.
Deposit date:1997-02-26
Release date:1997-09-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Analyses of the stability and function of three surface mutants (R82C, K69H, and L32R) of the gene V protein from Ff phage by X-ray crystallography.
Protein Sci., 6, 1997
4NQ0
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BU of 4nq0 by Molmil
Structural insights into yeast histone chaperone Hif1: a scaffold protein recruiting protein complexes to core histones
Descriptor: HAT1-interacting factor 1
Authors:Liu, H, Zhang, M, He, W, Zhu, Z, Teng, M, Gao, Y, Niu, L.
Deposit date:2013-11-23
Release date:2014-07-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into yeast histone chaperone Hif1: a scaffold protein recruiting protein complexes to core histones
Biochem.J., 462, 2014
6L1Q
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BU of 6l1q by Molmil
Crystal structure of AfCbbQ2, a MoxR AAA+-ATPase and CbbQO-type Rubisco activase from Acidithiobacillus ferrooxidans
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CbbQ protein, PHOSPHATE ION
Authors:Ye, F.Z, Tsai, Y.C.C, Mueller-Cajar, O, Gao, Y.G.
Deposit date:2019-09-30
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insights into the mechanism and regulation of the CbbQO-type Rubisco activase, a MoxR AAA+ ATPase.
Proc.Natl.Acad.Sci.USA, 117, 2020
3EHR
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BU of 3ehr by Molmil
Crystal Structure of Human Osteoclast Stimulating Factor
Descriptor: Osteoclast-stimulating factor 1
Authors:Tong, S, Zhou, H, Gao, Y, Zhu, Z, Zhang, X, Teng, M, Niu, L.
Deposit date:2008-09-14
Release date:2009-08-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of human osteoclast stimulating factor
Proteins, 75, 2009
4ZN3
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Crystal Structure of MjSpt4:Spt5 complex conformation B
Descriptor: FE (III) ION, GLYCEROL, Transcription elongation factor Spt4, ...
Authors:Guo, G.R, Zhou, H.H, Gao, Y.X, Zhu, Z.L, Niu, L.W, Teng, M.K.
Deposit date:2015-05-04
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical insights into the DNA-binding mode of MjSpt4p:Spt5 complex at the exit tunnel of RNAPII
J.Struct.Biol., 192, 2015
4ZN1
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Crystal Structure of MjSpt4:Spt5 complex conformation A
Descriptor: Transcription elongation factor Spt4, Transcription elongation factor Spt5, ZINC ION
Authors:Guo, G.R, Zhou, H.H, Gao, Y.X, Zhu, Z.L, Niu, L.W, Teng, M.K.
Deposit date:2015-05-04
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical insights into the DNA-binding mode of MjSpt4p:Spt5 complex at the exit tunnel of RNAPII
J.Struct.Biol., 192, 2015
7YMI
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BU of 7ymi by Molmil
PSII-Pcb Dimer of Acaryochloris Marina
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Shen, L.L, Gao, Y.Z, Wang, W.D, Zhang, X, Shen, J.R, Wang, P.Y, Han, G.Y.
Deposit date:2022-07-28
Release date:2023-08-16
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a unique PSII-Pcb tetrameric megacomplex in a chlorophyll d -containing cyanobacterium.
Sci Adv, 10, 2024
3UNW
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BU of 3unw by Molmil
Crystal Structure of Human GAC in Complex with Glutamate
Descriptor: GLUTAMIC ACID, Glutaminase kidney isoform, mitochondrial
Authors:DeLaBarre, B, Gross, S, Cheng, F, Gao, Y, Jha, A, Jiang, F, Song, J.J, Wie, W, Hurov, J.
Deposit date:2011-11-16
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Full-length human glutaminase in complex with an allosteric inhibitor.
Biochemistry, 50, 2011
1JP3
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BU of 1jp3 by Molmil
Structure of E.coli undecaprenyl pyrophosphate synthase
Descriptor: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL, undecaprenyl pyrophosphate synthase
Authors:Ko, T.P, Chen, Y.K, Robinson, H, Tsai, P.C, Gao, Y.G, Chen, A.P.C, Wang, A.H.J, Liang, P.H.
Deposit date:2001-07-31
Release date:2001-08-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of product chain length determination and the role of a flexible loop in Escherichia coli undecaprenyl-pyrophosphate synthase catalysis.
J.Biol.Chem., 276, 2001
3UO9
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Crystal Structure of Human GAC in Complex with Glutamate and BPTES
Descriptor: GLYCEROL, Glutaminase kidney isoform, mitochondrial, ...
Authors:DeLaBarre, B, Gross, S, Cheng, F, Gao, Y, Jha, A, Jiang, F, Song, J.J, Wei, W, Hurov, J.B.
Deposit date:2011-11-16
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Full-length human glutaminase in complex with an allosteric inhibitor.
Biochemistry, 50, 2011
3DAP
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BU of 3dap by Molmil
C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH NADP+ AND THE INHIBITOR 5S-ISOXAZOLINE
Descriptor: (2S,5',S)-2-AMINO-3-(3-CARBOXY-2-ISOXAZOLIN-5-YL)PROPANOIC ACID, DIAMINOPIMELIC ACID DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Scapin, G, Cirilli, M, Reddy, S.G, Gao, Y, Vederas, J.C, Blanchard, J.S.
Deposit date:1997-12-29
Release date:1998-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate and inhibitor binding sites in Corynebacterium glutamicum diaminopimelate dehydrogenase.
Biochemistry, 37, 1998
5BT1
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BU of 5bt1 by Molmil
histone chaperone Hif1 playing with histone H2A-H2B dimer
Descriptor: HAT1-interacting factor 1, Histone H2A.1, Histone H2B.1
Authors:Liu, H, Zhang, M, Gao, Y, Teng, M, Niu, L.
Deposit date:2015-06-02
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural Insights into the Association of Hif1 with Histones H2A-H2B Dimer and H3-H4 Tetramer
Structure, 24, 2016
3EHQ
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BU of 3ehq by Molmil
Crystal Structure of Human Osteoclast Stimulating Factor
Descriptor: 1,2-ETHANEDIOL, Osteoclast-stimulating factor 1
Authors:Tong, S, Zhou, H, Gao, Y, Zhu, Z, Zhang, X, Teng, M, Niu, L.
Deposit date:2008-09-14
Release date:2009-08-04
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of human osteoclast stimulating factor
Proteins, 75, 2009
1CA5
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BU of 1ca5 by Molmil
INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
Descriptor: 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3', CHROMOSOMAL PROTEIN SAC7D
Authors:Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
Deposit date:1999-02-23
Release date:2000-02-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
1CA6
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BU of 1ca6 by Molmil
INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
Descriptor: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D
Authors:Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
Deposit date:1999-02-23
Release date:2000-02-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
2DAP
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BU of 2dap by Molmil
C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH DAP
Descriptor: 2,6-DIAMINOPIMELIC ACID, DIAMINOPIMELIC ACID DEHYDROGENASE
Authors:Scapin, G, Cirilli, M, Reddy, S.G, Gao, Y, Vederas, J.C, Blanchard, J.S.
Deposit date:1997-12-23
Release date:1998-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate and inhibitor binding sites in Corynebacterium glutamicum diaminopimelate dehydrogenase.
Biochemistry, 37, 1998
3P6Y
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CF Im25-CF Im68-UGUAA complex
Descriptor: 5'-R(*UP*GP*UP*AP*A)-3', Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Li, H, Tong, S, Li, X, Shi, H, Gao, Y, Ge, H, Niu, L, Teng, M.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of pre-mRNA recognition by the human cleavage factor Im complex
To be Published
4O8B
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BU of 4o8b by Molmil
Crystal structure of transcriptional regulator BswR
Descriptor: Uncharacterized protein
Authors:Ye, F.Z, Wang, C, Kumar, V, Zhang, L.H, Gao, Y.G.
Deposit date:2013-12-26
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:BswR controls bacterial motility and biofilm formation in Pseudomonas aeruginosa through modulation of the small RNA rsmZ.
Nucleic Acids Res., 42, 2014
1U5Q
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Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K
Descriptor: CALCIUM ION, serine/threonine protein kinase TAO2
Authors:Zhou, T, Raman, M, Gao, Y, Earnest, S, Chen, Z, Machius, M, Cobb, M.H, Goldsmith, E.J.
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the TAO2 Kinase Domain; Activation and Specificity of a Ste20p MAP3K.
STRUCTURE, 12, 2004
1U5R
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Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Zhou, T, Raman, M, Gao, Y, Earnest, S, Chen, Z, Machius, M, Cobb, M.H, Goldsmith, E.J.
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the TAO2 Kinase Domain; Activation and Specificity of a Ste20p MAP3K.
Structure, 12, 2004
3JYN
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Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase complexed with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Quinone oxidoreductase
Authors:Pan, X, Zhang, H, Gao, Y, Li, M, Chang, W.
Deposit date:2009-09-22
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structures of Pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase and its complex with NADPH
Biochem.Biophys.Res.Commun., 390, 2009
3K9Z
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Rational Design of a Structural and Functional Nitric Oxide Reductase
Descriptor: FE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yeung, N, Lin, Y.-W, Gao, Y.-G, Zhao, X, Russell, B.S, Lei, L, Miner, K.D, Robinson, H, Lu, Y.
Deposit date:2009-10-16
Release date:2009-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Rational design of a structural and functional nitric oxide reductase.
Nature, 462, 2009
3JYL
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BU of 3jyl by Molmil
Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase
Descriptor: Quinone oxidoreductase
Authors:Pan, X, Zhang, H, Gao, Y, Li, M, Chang, W.
Deposit date:2009-09-22
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase and its complex with NADPH
Biochem.Biophys.Res.Commun., 390, 2009

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