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PDB: 692 件
1AZP
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
分子名称: DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
著者Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
登録日1997-11-19
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998
4F85
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Structure analysis of Geranyl diphosphate methyltransferase
分子名称: Geranyl diphosphate 2-C-methyltransferase
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
4F84
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Structure analysis of Geranyl diphosphate methyltransferase in complex with SAM
分子名称: Geranyl diphosphate 2-C-methyltransferase, S-ADENOSYLMETHIONINE
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
5A9Y
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BU of 5a9y by Molmil
Structure of ppGpp BipA
分子名称: GTP-BINDING PROTEIN, GUANOSINE-5',3'-TETRAPHOSPHATE
著者Kumar, V, Chen, Y, Ero, R, Li, Z, Gao, Y.-G.
登録日2015-07-23
公開日2015-08-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
7CXN
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BU of 7cxn by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
登録日2020-09-02
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
5A9Z
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Complex of Thermous thermophilus ribosome bound to BipA-GDPCP
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Kumar, V, Chen, Y, Ahmed, T, Tan, J, Ero, R, Bhushan, S, Gao, Y.-G.
登録日2015-07-23
公開日2015-10-14
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5AA0
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BU of 5aa0 by Molmil
Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ...
著者Kumar, V, Chen, Y, Ahmed, T, Tan, J, Ero, R, Bhushan, S, Gao, Y.-G.
登録日2015-07-23
公開日2015-10-14
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
2IA8
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BU of 2ia8 by Molmil
Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase
分子名称: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE
著者Pfister, T, Mirarefi, A.Y, Gengenbach, A.J, Zhao, X, Conaster, C.D.N, Gao, Y.G, Robinson, H, Zukoski, C.F, Wang, A.H.J, Lu, Y.
登録日2006-09-07
公開日2007-08-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase
J.Biol.Inorg.Chem., 12, 2007
7CK3
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BU of 7ck3 by Molmil
Crystal structure of Arabidopsis CESA3 catalytic domain
分子名称: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming]
著者Qiao, Z, Gao, Y.G.
登録日2020-07-15
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
5A9X
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BU of 5a9x by Molmil
Structure of GDP bound BipA
分子名称: GTP-BINDING PROTEIN, GUANOSINE-5'-DIPHOSPHATE
著者Kumar, V, Chen, Y, Ero, R, Li, Z, Gao, Y.-G.
登録日2015-07-23
公開日2015-08-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
2ICV
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BU of 2icv by Molmil
Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase
分子名称: COBALT (II) ION, Cytochrome c peroxidase, mitochondrial, ...
著者Pfister, T, Mirarefi, A.Y, Gengenbach, A.J, Zhao, X, Conaster, C.D.N, Gao, Y.G, Robinson, H, Zukoski, C.F, Wang, A.H.J, Lu, Y.
登録日2006-09-13
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase
J.Biol.Inorg.Chem., 12, 2007
2I19
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BU of 2i19 by Molmil
T. Brucei farnesyl diphosphate synthase complexed with bisphosphonate
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [2-(PYRIDIN-2-YLAMINO)ETHANE-1,1-DIYL]BIS(PHOSPHONIC ACID)
著者Cao, R, Mao, J, Gao, Y, Robinson, H, Odeh, S, Goddard, A, Oldfield, E.
登録日2006-08-13
公開日2006-10-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Solid-state NMR, crystallographic, and computational investigation of bisphosphonates and farnesyl diphosphate synthase-bisphosphonate complexes.
J.Am.Chem.Soc., 128, 2006
4DBF
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BU of 4dbf by Molmil
Crystal structures of Cg1458
分子名称: 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE, MAGNESIUM ION
著者Ran, T.T, Xu, D.Q, Wang, W.W, Gao, Y.Y, Wang, M.T.
登録日2012-01-15
公開日2012-11-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Cg1458 reveal a catalytic lid domain and a common catalytic mechanism for FAH family.
Biochem.J., 449, 2013
4DBH
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BU of 4dbh by Molmil
Crystal structure of Cg1458 with inhibitor
分子名称: 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE, MAGNESIUM ION, OXALATE ION
著者Ran, T.T, Wang, W.W, Xu, D.Q, Gao, Y.Y.
登録日2012-01-15
公開日2012-11-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structures of Cg1458 reveal a catalytic lid domain and a common catalytic mechanism for FAH family.
Biochem.J., 449, 2013
2OPM
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BU of 2opm by Molmil
Human Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461
分子名称: 3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM, Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)], MAGNESIUM ION, ...
著者Cao, R, Gao, Y.G, Robinson, H, Goddard, A.
登録日2007-01-29
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lipophilic bisphosphonates as dual farnesyl/geranylgeranyl diphosphate synthase inhibitors: an X-ray and NMR investigation.
J.Am.Chem.Soc., 131, 2009
5D6M
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Mn(II)-loaded MnCcP.1
分子名称: Cytochrome c peroxidase, mitochondrial, MANGANESE (II) ION, ...
著者Robinson, H, Gao, Y.-G, Hosseinzadeh, P, Lu, Y.
登録日2015-08-12
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions.
Biochemistry, 55, 2016
4F86
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BU of 4f86 by Molmil
Structure analysis of Geranyl diphosphate methyltransferase in complex with GPP and sinefungin
分子名称: GERANYL DIPHOSPHATE, Geranyl diphosphate 2-C-methyltransferase, MAGNESIUM ION, ...
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
7CK1
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BU of 7ck1 by Molmil
Crystal structure of arabidopsis CESA3 catalytic domain
分子名称: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming], MANGANESE (II) ION
著者Qiao, Z, Gao, Y.G.
登録日2020-07-15
公開日2021-03-17
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CK2
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BU of 7ck2 by Molmil
Crystal structure of Arabidopsis CESA3 catalytic domain with UDP-Glucose
分子名称: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming], MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Qiao, Z, Gao, Y.G.
登録日2020-07-15
公開日2021-03-17
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
4EAY
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BU of 4eay by Molmil
Crystal structures of mannonate dehydratase from Escherichia coli strain K12 complexed with D-mannonate
分子名称: CHLORIDE ION, D-MANNONIC ACID, MANGANESE (II) ION, ...
著者Qiu, X, Zhu, Y, Yuan, Y, Zhang, Y, Liu, H, Gao, Y, Teng, M, Niu, L.
登録日2012-03-23
公開日2013-03-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
4EAC
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Crystal structure of mannonate dehydratase from Escherichia coli strain K12
分子名称: CHLORIDE ION, MANGANESE (II) ION, Mannonate dehydratase
著者Qiu, X, Zhu, Y, Yuan, Y, Zhang, Y, Liu, H, Gao, Y, Teng, M, Niu, L.
登録日2012-03-22
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
2OGD
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BU of 2ogd by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-527
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
著者Cao, R, Gao, Y, Robinson, H, Goddard, A, Oldfield, E.
登録日2007-01-05
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bisphosphonates: Teaching Old Drugs with New Tricks
TO BE PUBLISHED
2B1K
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Crystal structure of E. coli CcmG protein
分子名称: Thiol:disulfide interchange protein dsbE
著者Ouyang, N, Gao, Y.G, Hu, H.Y, Xia, Z.X.
登録日2005-09-15
公開日2006-09-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of E. coli CcmG and its mutants reveal key roles of the N-terminal beta-sheet and the fingerprint region
Proteins, 65, 2006
3DXZ
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BU of 3dxz by Molmil
Crystal structure of EcTrmB in complex with SAH
分子名称: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Zhou, H.H, Liu, Q, Gao, Y.X, Teng, M.K, Niu, L.W.
登録日2008-07-25
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Monomeric tRNA (m(7)G46) methyltransferase from Escherichia coli presents a novel structure at the function-essential insertion
Proteins, 76, 2009
3DXY
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Crystal structure of EcTrmB in complex with SAM
分子名称: GLYCEROL, S-ADENOSYLMETHIONINE, SULFATE ION, ...
著者Zhou, H.H, Liu, Q, Gao, Y.X, Teng, M.K, Niu, L.W.
登録日2008-07-25
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Monomeric tRNA (m(7)G46) methyltransferase from Escherichia coli presents a novel structure at the function-essential insertion
Proteins, 76, 2009

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