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PDB: 1718 results

6BAA
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BU of 6baa by Molmil
Cryo-EM structure of the pancreatic beta-cell KATP channel bound to ATP and glibenclamide
Descriptor: 5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide, ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family C member 8, ...
Authors:Martin, G.M, Yoshioka, C, Shyng, S.L.
Deposit date:2017-10-12
Release date:2017-11-01
Last modified:2019-12-25
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Anti-diabetic drug binding site in a mammalian KATPchannel revealed by Cryo-EM.
Elife, 6, 2017
6B9C
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BU of 6b9c by Molmil
Superfolder Green Fluorescent Protein with 4-nitro-L-phenylalanine at the chromophore (position 66)
Descriptor: CARBON DIOXIDE, Green fluorescent protein
Authors:Phillips-Piro, C.M, Brewer, S.H, Olenginski, G.M, Piacentini, J.
Deposit date:2017-10-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein
Acta Crystallogr.,Sect.D, 2021
6ARQ
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BU of 6arq by Molmil
Crystal structure of CD96 (D1) bound to CD155/necl-5 (D1-3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Poliovirus receptor, T-cell surface protein tactile, ...
Authors:Deuss, F.A, Watson, G.M, Rossjohn, J, Berry, R.
Deposit date:2017-08-23
Release date:2018-11-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural Basis for CD96 Immune Receptor Recognition of Nectin-like Protein-5, CD155.
Structure, 27, 2019
6BDO
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BU of 6bdo by Molmil
Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with a quinone inhibitor HQNO at 2.8A resolution
Descriptor: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2017-10-23
Release date:2018-05-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the NDH-2 - HQNO inhibited complex provides molecular insight into quinone-binding site inhibitors.
Biochim. Biophys. Acta, 1859, 2018
6C44
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BU of 6c44 by Molmil
Zika virus capsid protein
Descriptor: Capsid protein
Authors:Morando, M.A, Barbosa, G.M, Cruz-Oliveira, C, Da Poian, A.T, Almeida, F.C.L.
Deposit date:2018-01-11
Release date:2019-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dynamics of Zika Virus Capsid Protein in Solution: The Properties and Exposure of the Hydrophobic Cleft Are Controlled by the alpha-Helix 1 Sequence.
Biochemistry, 58, 2019
6BJX
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BU of 6bjx by Molmil
Group I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)
Descriptor: Group I self-splicing intron P4-P6 domain, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2017-11-07
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8M
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BU of 6d8m by Molmil
Group I self-splicing intron P4-P6 domain mutant A125U/G126U
Descriptor: Group I self-splicing intron, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2018-04-26
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8O
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BU of 6d8o by Molmil
Group I self-splicing intron P4-P6 domain mutant A230U
Descriptor: Group I self-splicing intron, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2018-04-26
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.80112481 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
7YK1
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BU of 7yk1 by Molmil
Structural basis of human PRPS2 filaments
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Lu, G.M, Hu, H.H, Liu, J.L.
Deposit date:2022-07-21
Release date:2023-08-02
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural basis of human PRPS2 filaments.
Cell Biosci, 13, 2023
7YLT
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BU of 7ylt by Molmil
Structure of a bacteria protein
Descriptor: Putative ABC transporter, substrate-binding protein
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a bacteria protein
To Be Published
7YLS
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BU of 7yls by Molmil
Structure of a bacteria protein complex
Descriptor: ACETATE ION, Aromatic-ring-hydroxylating dioxygenase beta subunit, FE (III) ION, ...
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a bacteria protein complex
To Be Published
7YLR
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BU of 7ylr by Molmil
Structure of a bacteria protein
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Ferredoxin
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure of a bacteria protein
To Be Published
7XRV
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BU of 7xrv by Molmil
Bacteroides thetaiotaomicron ferulic acid esterase - S150A (BT_4077-S150A) complex with trans-methylferulate
Descriptor: CALCIUM ION, Ferulic acid esterase, Trans-methylferulate
Authors:Du, G.M, Wang, Y.L, Xin, F.J.
Deposit date:2022-05-11
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Insights into the regulatory mechanism of BtFae activity by oligomerization and a distinct substrate binding pocket adjacent to the active site
To Be Published
7XRT
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BU of 7xrt by Molmil
Bacteroides thetaiotaomicron ferulic acid esterase (BT_4077)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Ferulic acid esterase
Authors:Du, G.M, Wang, Y.L, Xin, F.J.
Deposit date:2022-05-11
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Insights into the regulatory mechanism of BtFae activity by oligomerization and a distinct substrate binding pocket adjacent to the active site
To Be Published
6N8C
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BU of 6n8c by Molmil
Structure of the Huntingtin tetramer/dimer mixture determined by paramagnetic NMR
Descriptor: Huntingtin
Authors:Schwieters, C.D, Kotler, S.A, Schmidt, T, Ceccon, A, Ghirlando, R, Libich, D.S, Clore, G.M.
Deposit date:2018-11-29
Release date:2019-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Probing initial transient oligomerization events facilitating Huntingtin fibril nucleation at atomic resolution by relaxation-based NMR.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6XIR
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BU of 6xir by Molmil
Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
Descriptor: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Zhou, Y, Bartesaghi, A, Silva, G.M.
Deposit date:2020-06-21
Release date:2020-08-26
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YI4
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BU of 6yi4 by Molmil
Structure of IMP-13 metallo-beta-lactamase complexed with citrate anion
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Zak, K.M, Zhou, R.X, Softley, C.A, Bostock, M.J, Sattler, M, Popowicz, G.M.
Deposit date:2020-03-31
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of IMP-13 metallo-beta-lactamase complexed with citrate anion
Not published
6XIQ
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BU of 6xiq by Molmil
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Descriptor: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Zhou, Y, Bartesaghi, A, Silva, G.M.
Deposit date:2020-06-21
Release date:2020-08-26
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
3GAT
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BU of 3gat by Molmil
SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, 34 STRUCTURES
Descriptor: DNA (5'-D(*AP*AP*TP*GP*TP*TP*TP*AP*TP*CP*TP*GP*CP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*GP*CP*AP*GP*AP*TP*AP*AP*AP*CP*AP*TP*T)-3'), ERYTHROID TRANSCRIPTION FACTOR GATA-1, ...
Authors:Clore, G.M, Tjandra, N, Starich, M, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1997-11-07
Release date:1998-01-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Use of dipolar 1H-15N and 1H-13C couplings in the structure determination of magnetically oriented macromolecules in solution.
Nat.Struct.Biol., 4, 1997
3GT4
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BU of 3gt4 by Molmil
Structure of proteinase K with the magic triangle I3C
Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, SULFATE ION, proteinase K
Authors:Beck, T, Gruene, T, Sheldrick, G.M.
Deposit date:2009-03-27
Release date:2009-04-14
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The magic triangle goes MAD: experimental phasing with a bromine derivative
Acta Crystallogr.,Sect.D, 66, 2010
3GT3
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BU of 3gt3 by Molmil
Structure of proteinase K with the mad triangle B3C
Descriptor: 5-amino-2,4,6-tribromobenzene-1,3-dicarboxylic acid, Proteinase K, SULFATE ION
Authors:Beck, T, Gruene, T, Sheldrick, G.M.
Deposit date:2009-03-27
Release date:2009-04-14
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The magic triangle goes MAD: experimental phasing with a bromine derivative
Acta Crystallogr.,Sect.D, 66, 2010
5ADO
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BU of 5ado by Molmil
Crystal structure of the paraoxon-modified A.17 antibody FAB fragment - Light chain S35R mutant
Descriptor: DIETHYL PHOSPHONATE, FAB A.17
Authors:Chatziefthimiou, S.D, Smirnov, I.V, Golovin, A.V, Stepanova, A.V, Peng, Y, Zolotareva, O.I, Belogurov, A.A, Ponomarenko, N.A, Blackburn, G.M, Gabibov, A.A, Lerner, R, Wilmanns, M.
Deposit date:2015-08-21
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Robotic Qm/Mm-Driven Maturation of Antibody Combining Sites.
Sci.Adv., 2, 2016
6O3O
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BU of 6o3o by Molmil
Structure of human DNAM-1 (CD226) bound to nectin-like protein-5 (necl-5)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD226 antigen, ...
Authors:Deuss, F.A, Watson, G.M, Rossjohn, J, Berry, R.
Deposit date:2019-02-27
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the recognition of nectin-like protein-5 by the human-activating immune receptor, DNAM-1.
J.Biol.Chem., 294, 2019
3ITI
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BU of 3iti by Molmil
Structure of bovine trypsin with the MAD triangle B3C
Descriptor: 5-amino-2,4,6-tribromobenzene-1,3-dicarboxylic acid, BENZAMIDINE, CALCIUM ION, ...
Authors:Beck, T, da Cunha, C.E, Sheldrick, G.M.
Deposit date:2009-08-28
Release date:2009-10-27
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:How to get the magic triangle and the MAD triangle into your protein crystal.
Acta Crystallogr.,Sect.F, 65, 2009
7SJR
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BU of 7sjr by Molmil
Cryo-EM structure of AdnA-AdnB(W325A) in complex with DNA and AMPPNP
Descriptor: DNA (70-MER), DNA helicase, IRON/SULFUR CLUSTER, ...
Authors:Wang, J, Warren, G.M, Shuman, S, Patel, D.J.
Deposit date:2021-10-18
Release date:2021-12-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure-activity relationships at a nucleobase-stacking tryptophan required for chemomechanical coupling in the DNA resecting motor-nuclease AdnAB.
Nucleic Acids Res., 50, 2022

223790

數據於2024-08-14公開中

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